Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 MIR5739-201ENST00000619803 80 ntBASIC3□□□□□ -1.93
RTF1Q92541 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC3□□□□□ -1.93
RTF1Q92541 MIR6873-201ENST00000622788 63 ntBASIC3□□□□□ -1.93
RTF1Q92541 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
RTF1Q92541 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC3□□□□□ -1.93
RTF1Q92541 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RTF1Q92541 SNORD27-201ENST00000363981 72 ntBASIC2.99□□□□□ -1.93
RTF1Q92541 RNU6-944P-201ENST00000364023 107 ntBASIC2.99□□□□□ -1.93
RTF1Q92541 SNORD87-201ENST00000364849 89 ntBASIC2.99□□□□□ -1.93
RTF1Q92541 Y_RNA.446-201ENST00000384178 104 ntBASIC2.99□□□□□ -1.93
RTF1Q92541 Y_RNA.539-201ENST00000384635 107 ntBASIC2.99□□□□□ -1.93
RTF1Q92541 TOMM22P2-201ENST00000430735 237 ntBASIC2.99□□□□□ -1.93
RTF1Q92541 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.99□□□□□ -1.93
RTF1Q92541 POLR2KP2-201ENST00000438155 177 ntBASIC2.99□□□□□ -1.93
RTF1Q92541 RNU6-107P-201ENST00000516643 102 ntBASIC2.99□□□□□ -1.93
RTF1Q92541 RNU1-117P-201ENST00000517041 158 ntBASIC2.99□□□□□ -1.93
RTF1Q92541 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.99□□□□□ -1.93
RTF1Q92541 AL109918.3-201ENST00000603072 338 ntBASIC2.99□□□□□ -1.93
RTF1Q92541 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RTF1Q92541 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
RTF1Q92541 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RTF1Q92541 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
RTF1Q92541 Y_RNA.383-201ENST00000383855 97 ntBASIC2.98□□□□□ -1.93
RTF1Q92541 MIR627-201ENST00000384979 97 ntBASIC2.98□□□□□ -1.93
RTF1Q92541 MIR95-201ENST00000385072 81 ntBASIC2.98□□□□□ -1.93
RTF1Q92541 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.98□□□□□ -1.93
RTF1Q92541 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC2.98□□□□□ -1.93
RTF1Q92541 RPS29P21-201ENST00000496272 170 ntBASIC2.98□□□□□ -1.93
RTF1Q92541 AC023141.11-201ENST00000508864 202 ntBASIC2.98□□□□□ -1.93
RTF1Q92541 MIR3616-201ENST00000584070 92 ntBASIC2.98□□□□□ -1.93
RTF1Q92541 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.98□□□□□ -1.93
RTF1Q92541 AC010297.1-201ENST00000623948 149 ntBASIC2.98□□□□□ -1.93
RTF1Q92541 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.98□□□□□ -1.93
RTF1Q92541 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
RTF1Q92541 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.97□□□□□ -1.93
RTF1Q92541 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
RTF1Q92541 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.97□□□□□ -1.93
RTF1Q92541 SNORA25.1-201ENST00000362326 128 ntBASIC2.97□□□□□ -1.93
RTF1Q92541 Y_RNA.44-201ENST00000362676 108 ntBASIC2.97□□□□□ -1.93
RTF1Q92541 Y_RNA.54-201ENST00000362766 105 ntBASIC2.97□□□□□ -1.93
RTF1Q92541 RNY1-201ENST00000364228 113 ntBASIC2.97□□□□□ -1.93
RTF1Q92541 RNU6-234P-201ENST00000365229 104 ntBASIC2.97□□□□□ -1.93
RTF1Q92541 MIR300-201ENST00000401138 83 ntBASIC2.97□□□□□ -1.93
RTF1Q92541 RNU6-1199P-201ENST00000411249 104 ntBASIC2.97□□□□□ -1.93
RTF1Q92541 AC018634.1-201ENST00000437554 401 ntBASIC2.97□□□□□ -1.93
RTF1Q92541 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RTF1Q92541 CYP2C59P-201ENST00000457790 269 ntBASIC2.97□□□□□ -1.93
RTF1Q92541 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.97□□□□□ -1.93
RTF1Q92541 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC2.97□□□□□ -1.93
RTF1Q92541 RNU4-71P-201ENST00000516258 113 ntBASIC2.97□□□□□ -1.93
RTF1Q92541 RNU2-12P-201ENST00000517216 168 ntBASIC2.97□□□□□ -1.93
RTF1Q92541 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.97□□□□□ -1.93
RTF1Q92541 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC2.97□□□□□ -1.93
RTF1Q92541 MIR4648-201ENST00000580107 72 ntBASIC2.97□□□□□ -1.93
RTF1Q92541 AC006380.1-201ENST00000603598 186 ntBASIC2.97□□□□□ -1.93
RTF1Q92541 MIR6766-201ENST00000622641 72 ntBASIC2.97□□□□□ -1.93
RTF1Q92541 Y_RNA.277-201ENST00000364754 102 ntBASIC2.96□□□□□ -1.94
RTF1Q92541 RNU1-51P-201ENST00000365345 176 ntBASIC2.96□□□□□ -1.94
RTF1Q92541 RNA5SP240-201ENST00000365355 128 ntBASIC2.96□□□□□ -1.94
RTF1Q92541 RNU6-338P-201ENST00000383888 105 ntBASIC2.96□□□□□ -1.94
RTF1Q92541 Y_RNA.418-201ENST00000384029 102 ntBASIC2.96□□□□□ -1.94
RTF1Q92541 RNU6-514P-201ENST00000384208 107 ntBASIC2.96□□□□□ -1.94
RTF1Q92541 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.96□□□□□ -1.94
RTF1Q92541 AL161788.1-201ENST00000441805 169 ntBASIC2.96□□□□□ -1.94
RTF1Q92541 RPL23AP3-201ENST00000453844 468 ntBASIC2.96□□□□□ -1.94
RTF1Q92541 AC090515.1-201ENST00000465295 476 ntBASIC2.96□□□□□ -1.94
RTF1Q92541 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.96□□□□□ -1.94
RTF1Q92541 RNU6-155P-201ENST00000516347 100 ntBASIC2.96□□□□□ -1.94
RTF1Q92541 AC009779.6-201ENST00000603972 165 ntBASIC2.96□□□□□ -1.94
RTF1Q92541 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.96□□□□□ -1.94
RTF1Q92541 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RTF1Q92541 UBE2WP1-201ENST00000362030 340 ntBASIC2.95□□□□□ -1.94
RTF1Q92541 RNA5SP393-201ENST00000363423 117 ntBASIC2.95□□□□□ -1.94
RTF1Q92541 RNU6-454P-201ENST00000364292 107 ntBASIC2.95□□□□□ -1.94
RTF1Q92541 MIR221-201ENST00000385135 110 ntBASIC2.95□□□□□ -1.94
RTF1Q92541 TRBV25OR9-2-201ENST00000438417 374 ntBASIC2.95□□□□□ -1.94
RTF1Q92541 RNU7-14P-201ENST00000459331 62 ntBASIC2.95□□□□□ -1.94
RTF1Q92541 HMGN2P9-201ENST00000476875 229 ntBASIC2.95□□□□□ -1.94
RTF1Q92541 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC2.95□□□□□ -1.94
RTF1Q92541 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.95□□□□□ -1.94
RTF1Q92541 RNU6-966P-201ENST00000516479 104 ntBASIC2.95□□□□□ -1.94
RTF1Q92541 MIR5194-201ENST00000582634 120 ntBASIC2.95□□□□□ -1.94
RTF1Q92541 AL356280.1-201ENST00000603614 379 ntBASIC2.95□□□□□ -1.94
RTF1Q92541 CCDC148-202ENST00000409187 2523 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
RTF1Q92541 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
RTF1Q92541 RNU6-1305P-201ENST00000364353 104 ntBASIC2.94□□□□□ -1.94
RTF1Q92541 MIR548B-201ENST00000385247 97 ntBASIC2.94□□□□□ -1.94
RTF1Q92541 MIR1283-1-201ENST00000408494 87 ntBASIC2.94□□□□□ -1.94
RTF1Q92541 RNA5SP181-201ENST00000410246 98 ntBASIC2.94□□□□□ -1.94
RTF1Q92541 SUMO1P4-201ENST00000429430 302 ntBASIC2.94□□□□□ -1.94
RTF1Q92541 MTCO1P5-201ENST00000433573 344 ntBASIC2.94□□□□□ -1.94
RTF1Q92541 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.94□□□□□ -1.94
RTF1Q92541 Z98949.2-201ENST00000440996 144 ntBASIC2.94□□□□□ -1.94
RTF1Q92541 MRPS10P1-201ENST00000448483 130 ntBASIC2.94□□□□□ -1.94
RTF1Q92541 AL139109.1-201ENST00000455491 297 ntBASIC2.94□□□□□ -1.94
RTF1Q92541 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.94□□□□□ -1.94
RTF1Q92541 MIR449C-201ENST00000516047 92 ntBASIC2.94□□□□□ -1.94
RTF1Q92541 SNORA31.15-201ENST00000516771 132 ntBASIC2.94□□□□□ -1.94
RTF1Q92541 SNORA48.11-201ENST00000517015 89 ntBASIC2.94□□□□□ -1.94
RTF1Q92541 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC2.94□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms