Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MTND4P18-201ENST00000447010 465 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNU6-311P-201ENST00000516224 102 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 Vault.3-201ENST00000516676 95 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MIR4509-3-201ENST00000578671 94 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MIR4509-2-201ENST00000583920 94 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AP001180.6-201ENST00000584918 159 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC004223.2-201ENST00000590309 544 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC068790.2-201ENST00000602601 557 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC011458.1-201ENST00000604034 617 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 Z99289.3-201ENST00000605586 594 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC008250.2-201ENST00000615261 205 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MIR4509-1-201ENST00000618224 94 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AP000568.1-201ENST00000282964 442 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 U3.4-201ENST00000363352 213 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 SNORA4.2-201ENST00000365313 147 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC073910.1-201ENST00000445047 438 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MTCO2P18-201ENST00000457151 658 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MIR4775-201ENST00000581168 75 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 U2.17-201ENST00000611454 95 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 U3.8-201ENST00000363675 217 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MIR140-201ENST00000385282 100 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 U8.16-201ENST00000391279 133 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MIR1253-201ENST00000408273 105 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNA5SP222-201ENST00000411039 105 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MTATP6P18-201ENST00000417994 673 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC098592.1-201ENST00000419352 333 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC018865.2-201ENST00000423631 129 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MTCO2P7-201ENST00000446518 666 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNU6-612P-201ENST00000516909 102 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC106038.2-201ENST00000520706 568 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MIR4300-201ENST00000581016 96 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNU6-715P-201ENST00000365204 103 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNU6-827P-201ENST00000365553 106 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNU6-784P-201ENST00000384330 106 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNU7-167P-201ENST00000459160 62 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 SNORA70.12-201ENST00000516084 153 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNU6-1069P-201ENST00000516612 133 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC025449.1-201ENST00000603896 529 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNU4-68P-201ENST00000364314 141 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNU6-541P-201ENST00000384709 110 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MIR660-201ENST00000385235 97 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC074198.2-201ENST00000508153 258 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RN7SKP12-201ENST00000516275 143 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MIR3612-201ENST00000579753 87 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC100810.6-201ENST00000638068 285 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.22-201ENST00000362492 102 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNU5F-6P-201ENST00000362979 116 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNU6-945P-201ENST00000383947 107 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNU6-331P-201ENST00000384724 107 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 SNORA32.3-201ENST00000384772 121 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC069113.1-201ENST00000517763 267 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MTND2P32-201ENST00000521584 1038 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 SNORA59B-202ENST00000578183 701 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MTND3P19-201ENST00000603825 345 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 PRELID3BP2-201ENST00000605362 201 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AL078596.1-201ENST00000624856 447 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNU6-1097P-201ENST00000363586 107 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 Y_RNA.228-201ENST00000364346 98 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 RNU6-969P-201ENST00000383900 105 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 SNORA36.2-201ENST00000384004 127 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AL390729.2-201ENST00000416137 156 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 U8.21-201ENST00000459536 136 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.05□□□□□ -2.4
SYNE1Q8NF91 SNORA25.14-201ENST00000516481 132 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 AC073534.2-201ENST00000620377 381 ntBASIC0.05□□□□□ -2.4
SYNE1Q8NF91 MTND5P16-201ENST00000460269 1703 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RNU6-108P-201ENST00000365558 107 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RNU5A-6P-201ENST00000384136 116 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RNU6-376P-201ENST00000384731 106 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 MIR938-201ENST00000401216 83 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RPS29P13-201ENST00000402041 169 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 MTND3P23-201ENST00000431980 347 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 RPL23AP50-201ENST00000434149 455 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AL606517.2-201ENST00000442855 241 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 STAG3L5P-204ENST00000443759 179 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AL049829.1-201ENST00000465411 156 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AL049830.1-201ENST00000468034 425 ntBASIC0.04□□□□□ -2.4
SYNE1Q8NF91 AL451064.1-201ENST00000607718 471 ntBASIC0.04□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 126.4 ms