Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 AC103975.1-201ENST00000482506 483 ntBASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 RN7SL633P-201ENST00000488974 297 ntBASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 RNU6-586P-201ENST00000517265 104 ntBASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 AC004486.1-201ENST00000546846 233 ntBASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 MIR3162-201ENST00000581818 82 ntBASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
SIMC1Q8NDZ2 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 RNA5SP432-201ENST00000362480 116 ntBASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 RNU1-62P-201ENST00000362599 164 ntBASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 RNU6-1272P-201ENST00000362776 107 ntBASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 Y_RNA.571-201ENST00000384753 98 ntBASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 RNA5SP274-201ENST00000410484 108 ntBASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 AC009963.1-201ENST00000417265 157 ntBASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 BTF3P11-201ENST00000426582 477 ntBASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 SUMO2P18-201ENST00000518873 252 ntBASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 MIR3670-2-201ENST00000582974 65 ntBASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 MIR3670-1-201ENST00000584160 65 ntBASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 MIR3670-3-201ENST00000584855 65 ntBASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 MIR3670-4-201ENST00000612260 65 ntBASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 AC090517.3-201ENST00000625170 141 ntBASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 MIR3674-201ENST00000636576 68 ntBASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SIMC1Q8NDZ2 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 AC009487.2-201ENST00000420969 6821 ntBASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 Y_RNA.272-201ENST00000364696 102 ntBASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 RNU6-1130P-201ENST00000365434 107 ntBASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 SNORA18.3-201ENST00000384122 132 ntBASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 MIR561-201ENST00000385216 97 ntBASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 Y_RNA.580-201ENST00000391004 95 ntBASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 RNA5SP475-201ENST00000410568 110 ntBASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 HMGN2P35-201ENST00000412164 270 ntBASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 AIMP1P2-201ENST00000425294 312 ntBASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 SNORA48.11-201ENST00000517015 89 ntBASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 MIR3923-201ENST00000579521 83 ntBASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 MIR4435-1-201ENST00000582552 80 ntBASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 SNRPGP20-201ENST00000604477 205 ntBASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.74□□□□□ -1.97
SIMC1Q8NDZ2 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
SIMC1Q8NDZ2 Y_RNA.329-201ENST00000365209 107 ntBASIC2.73□□□□□ -1.97
SIMC1Q8NDZ2 MIR95-201ENST00000385072 81 ntBASIC2.73□□□□□ -1.97
SIMC1Q8NDZ2 MIR320B2-201ENST00000408479 138 ntBASIC2.73□□□□□ -1.97
SIMC1Q8NDZ2 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.73□□□□□ -1.97
SIMC1Q8NDZ2 Y_RNA.637-201ENST00000459424 114 ntBASIC2.73□□□□□ -1.97
SIMC1Q8NDZ2 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.73□□□□□ -1.97
SIMC1Q8NDZ2 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.73□□□□□ -1.97
SIMC1Q8NDZ2 RNU6-436P-201ENST00000516171 114 ntBASIC2.73□□□□□ -1.97
SIMC1Q8NDZ2 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC2.73□□□□□ -1.97
SIMC1Q8NDZ2 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC2.73□□□□□ -1.97
SIMC1Q8NDZ2 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.73□□□□□ -1.97
SIMC1Q8NDZ2 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SIMC1Q8NDZ2 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.73□□□□□ -1.97
SIMC1Q8NDZ2 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.73□□□□□ -1.97
SIMC1Q8NDZ2 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 AC000403.1-201ENST00000613696 3585 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 Y_RNA.7-201ENST00000362352 102 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 Y_RNA.40-201ENST00000362645 93 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 RNU6-454P-201ENST00000364292 107 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 Y_RNA.238-201ENST00000364441 102 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 RNA5SP125-201ENST00000364843 120 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 SNORD116-18-201ENST00000383961 92 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 Y_RNA.415-201ENST00000384012 112 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 RNU6-1081P-201ENST00000384537 107 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 RNU6-1248P-201ENST00000391096 64 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 RNA5SP201-201ENST00000410316 124 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 RNU2-2P-201ENST00000410396 191 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 RNU2-12P-201ENST00000517216 168 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 AL034555.1-201ENST00000604816 211 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 AL033523.1-201ENST00000605153 153 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 RNU2-4P-201ENST00000606190 192 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 U2.15-201ENST00000611544 191 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 U2.16-201ENST00000613119 191 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 U2.12-201ENST00000613778 191 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 U2.9-201ENST00000615427 191 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 U2.11-201ENST00000616345 191 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 U2.2-201ENST00000616535 191 ntBASIC2.72□□□□□ -1.97
SIMC1Q8NDZ2 U2.3-201ENST00000617785 191 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 133.3 ms