Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 AC084768.2-201ENST00000622736 221 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 WWP1P1-201ENST00000466609 2769 ntBASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.33□□□□□ -2.2
CCDC71LQ8N9Z2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 RNA5SP361-201ENST00000362686 118 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 SNORA33-201ENST00000363664 130 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 U3.8-201ENST00000363675 217 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 RNY3P11-201ENST00000364153 102 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 RNA5SP213-201ENST00000391031 106 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 Y_RNA.595-201ENST00000410403 105 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 AC114482.1-201ENST00000418010 247 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 AC245047.4-201ENST00000433189 144 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 HMGN2P34-201ENST00000437647 269 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 RNU7-169P-201ENST00000459456 61 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 FGF7P4-201ENST00000509595 295 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 RNA5SP437-201ENST00000517249 129 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 AC084364.2-201ENST00000546924 395 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 MIR3124-201ENST00000582636 67 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 AC069114.2-201ENST00000604699 304 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 PRR13P7-201ENST00000605538 430 ntBASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
CCDC71LQ8N9Z2 AC010615.1-201ENST00000594254 1764 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 SNORD114-1-201ENST00000362705 72 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-417P-201ENST00000384712 107 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 Y_RNA.577-201ENST00000384794 101 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 MIR329-1-201ENST00000385028 80 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 MIR625-201ENST00000385047 85 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 SNORA69.1-201ENST00000390904 137 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 AL117342.1-201ENST00000404861 406 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 MTCO2P27-201ENST00000420740 428 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 MRPS18CP6-201ENST00000423587 223 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 SDAD1P3-201ENST00000427380 333 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 HSPE1P9-201ENST00000440046 311 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 UBE2V1P7-201ENST00000446395 340 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 UQCRBP2-201ENST00000447827 297 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 ELOCP24-201ENST00000456370 334 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 HMGN1P13-201ENST00000505795 138 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 AC025647.1-201ENST00000517879 253 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 AC091144.1-201ENST00000519573 138 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 SUB1P3-201ENST00000564581 315 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 AP001485.1-201ENST00000604799 199 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 MIR8074-201ENST00000615081 81 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 AC087588.2-201ENST00000617667 426 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 MIR338-201ENST00000636369 67 ntBASIC1.31□□□□□ -2.2
CCDC71LQ8N9Z2 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 snoU2-30.2-201ENST00000362805 70 ntBASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 Y_RNA.314-201ENST00000365114 102 ntBASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 AC016909.1-201ENST00000415916 166 ntBASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 HSPE1P24-201ENST00000450782 238 ntBASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 AC112492.4-201ENST00000456549 352 ntBASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-221P-201ENST00000459541 99 ntBASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-237P-201ENST00000515985 71 ntBASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 AL357075.2-201ENST00000614906 189 ntBASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 MIR7843-201ENST00000622274 79 ntBASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 AC073544.1-201ENST00000600110 1595 ntBASIC1.3□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-661P-201ENST00000362409 107 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 RNU4-73P-201ENST00000363164 141 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-414P-201ENST00000363705 104 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 Y_RNA.287-201ENST00000364853 94 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-1240P-201ENST00000365155 104 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-1145P-201ENST00000384246 107 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 MIR520A-201ENST00000384862 85 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 MIR1185-2-201ENST00000408687 86 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 Y_RNA.605-201ENST00000410577 105 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 AC008134.1-201ENST00000420943 193 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 AC236972.2-201ENST00000434979 310 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 PCNPP5-201ENST00000452246 481 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 SNORD19B-201ENST00000459623 84 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 MTND3P22-201ENST00000510932 243 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-1146P-201ENST00000516282 102 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 MIR4795-201ENST00000584182 89 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 BX248123.2-201ENST00000606318 124 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 AC095038.3-201ENST00000634439 195 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 MTND5P10-201ENST00000603719 1809 ntBASIC1.29□□□□□ -2.2
CCDC71LQ8N9Z2 AC100821.1-201ENST00000523153 2479 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-1301P-201ENST00000362724 104 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-1266P-201ENST00000362794 105 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-490P-201ENST00000362985 107 ntBASIC1.28□□□□□ -2.2
CCDC71LQ8N9Z2 RNU6-1019P-201ENST00000364424 107 ntBASIC1.28□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 117.2 ms