Protein–RNA interactions for Protein: Q6ZMZ3

SYNE3, Nesprin-3, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3Q6ZMZ3 U2.15-201ENST00000611544 191 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 U2.16-201ENST00000613119 191 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 U2.12-201ENST00000613778 191 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 Y_RNA.784-201ENST00000613803 101 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 U2.20-201ENST00000613956 192 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 U2.9-201ENST00000615427 191 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 U2.11-201ENST00000616345 191 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 Y_RNA.787-201ENST00000616522 101 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 U2.2-201ENST00000616535 191 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 Y_RNA.780-201ENST00000617336 101 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 U2.3-201ENST00000617785 191 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 U2.19-201ENST00000618602 191 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 RNU2-1-201ENST00000618664 191 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 Y_RNA.801-201ENST00000619005 101 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 U2.6-201ENST00000619225 191 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 U2.5-201ENST00000619465 191 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 U2.10-201ENST00000620268 191 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 snoZ196.1-201ENST00000625269 89 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 ZNF72P-201ENST00000425869 1908 ntBASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC2.28□□□□□ -2.04
SYNE3Q6ZMZ3 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 ZNF355P-201ENST00000427301 3216 ntBASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 SNORD114-6-201ENST00000364393 72 ntBASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 SNORA16B-201ENST00000364674 135 ntBASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 MIR518A2-201ENST00000384966 87 ntBASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 MIR1185-2-201ENST00000408687 86 ntBASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 RNU2-40P-201ENST00000410833 196 ntBASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 AC139712.2-201ENST00000424302 339 ntBASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 RPEP5-201ENST00000441137 268 ntBASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 AP002001.1-203ENST00000534002 267 ntBASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 HSBP1P1-201ENST00000555205 166 ntBASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 AL096840.1-201ENST00000603287 93 ntBASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 AC025754.2-201ENST00000606491 432 ntBASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 AL353149.1-201ENST00000610667 244 ntBASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 AC240442.1-201ENST00000616055 283 ntBASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC2.27□□□□□ -2.05
SYNE3Q6ZMZ3 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 RNU1-58P-201ENST00000362413 163 ntBASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 SNORA63-201ENST00000363450 132 ntBASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 RNU4-50P-201ENST00000364361 141 ntBASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 SNORD14.1-201ENST00000365609 90 ntBASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 Y_RNA.458-201ENST00000384240 102 ntBASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 RNU6-823P-201ENST00000391042 103 ntBASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 RNA5SP465-201ENST00000391195 109 ntBASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 RNA5SP270-201ENST00000411361 118 ntBASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 RAB28P5-201ENST00000427490 651 ntBASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 TRAPPC2P8-201ENST00000440676 396 ntBASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 MIR4423-201ENST00000580922 80 ntBASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 AC104984.5-201ENST00000586878 94 ntBASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 AL390123.1-201ENST00000603216 237 ntBASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.26□□□□□ -2.05
SYNE3Q6ZMZ3 Y_RNA.422-201ENST00000384054 114 ntBASIC2.25□□□□□ -2.05
SYNE3Q6ZMZ3 Y_RNA.551-201ENST00000384661 102 ntBASIC2.25□□□□□ -2.05
SYNE3Q6ZMZ3 RNU6-625P-201ENST00000459412 107 ntBASIC2.25□□□□□ -2.05
SYNE3Q6ZMZ3 RNU7-57P-201ENST00000459540 60 ntBASIC2.25□□□□□ -2.05
SYNE3Q6ZMZ3 RNA5SP364-201ENST00000516938 78 ntBASIC2.25□□□□□ -2.05
SYNE3Q6ZMZ3 MIR4659A-201ENST00000580269 81 ntBASIC2.25□□□□□ -2.05
SYNE3Q6ZMZ3 MIR3935-201ENST00000583472 104 ntBASIC2.25□□□□□ -2.05
SYNE3Q6ZMZ3 AL109918.3-201ENST00000603072 338 ntBASIC2.25□□□□□ -2.05
SYNE3Q6ZMZ3 SNRPGP19-201ENST00000603826 189 ntBASIC2.25□□□□□ -2.05
SYNE3Q6ZMZ3 CENPF-206ENST00000614578 528 ntTSL 5 BASIC2.25□□□□□ -2.05
SYNE3Q6ZMZ3 AC022513.1-201ENST00000624512 117 ntBASIC2.25□□□□□ -2.05
SYNE3Q6ZMZ3 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
SYNE3Q6ZMZ3 RNU6-961P-201ENST00000363893 105 ntBASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 Y_RNA.380-201ENST00000365663 111 ntBASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 RNU6-418P-201ENST00000384035 107 ntBASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 RNU6-639P-201ENST00000384074 107 ntBASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 RNU2-20P-201ENST00000410425 191 ntBASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 AC016909.1-201ENST00000415916 166 ntBASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 AL445685.2-201ENST00000422551 342 ntBASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 MTND2P29-201ENST00000438595 412 ntBASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 RNU6-1137P-201ENST00000517073 99 ntBASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 Y_RNA.715-201ENST00000517082 110 ntBASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 RPS29P30-201ENST00000600975 111 ntBASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 AL627230.6-201ENST00000611129 280 ntBASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 PART1_1.1-201ENST00000611761 217 ntBASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
SYNE3Q6ZMZ3 SNORD114-1-201ENST00000362705 72 ntBASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 RNA5SP493-201ENST00000364115 91 ntBASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 Y_RNA.230-201ENST00000364348 109 ntBASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 Y_RNA.276-201ENST00000364732 109 ntBASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 Y_RNA.361-201ENST00000365515 120 ntBASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 Y_RNA.455-201ENST00000384230 98 ntBASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 MIR1252-201ENST00000408861 65 ntBASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 RNU6-130P-201ENST00000411112 103 ntBASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 AC016717.1-201ENST00000448918 286 ntBASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 Y_RNA.713-201ENST00000517013 96 ntBASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 AC025647.1-201ENST00000517879 253 ntBASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 AC113195.1-201ENST00000579952 141 ntBASIC2.23□□□□□ -2.05
SYNE3Q6ZMZ3 AC007229.1-201ENST00000590455 412 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms