Protein–RNA interactions for Protein: Q3L8U1

CHD9, Chromodomain-helicase-DNA-binding protein 9, humanhuman

Predictions only

Length 2,897 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9Q3L8U1 AC144521.1-201ENST00000607148 956 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 AC068792.1-201ENST00000621354 417 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 ANKRD20A17P-201ENST00000511745 1330 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 MIR1253-201ENST00000408273 105 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 SNORA40.8-201ENST00000411034 126 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 RNU7-57P-201ENST00000459540 60 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 RNU2-56P-201ENST00000516826 190 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 AP003716.2-201ENST00000528260 108 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 AC112693.2-201ENST00000556538 232 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 MIR4743-201ENST00000584576 69 ntBASIC-0.23□□□□□ -2.45
CHD9Q3L8U1 RNU6-236P-201ENST00000363886 106 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 MIR643-201ENST00000385267 97 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 MIR1827-201ENST00000408549 66 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AL031779.1-201ENST00000415663 330 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AC008628.2-201ENST00000502605 298 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 RNA5SP268-201ENST00000516828 124 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 ZNF971P-201ENST00000562068 1249 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 MIR3146-201ENST00000580367 79 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 MIR4804-201ENST00000581683 73 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 MTND3P19-201ENST00000603825 345 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 BCRP9-201ENST00000605312 388 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AL031667.3-201ENST00000620124 655 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 SNORD115-24-201ENST00000363528 82 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 Y_RNA.150-201ENST00000363562 102 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 RNA5SP48-201ENST00000363969 126 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 Y_RNA.336-201ENST00000365307 109 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 Y_RNA.408-201ENST00000383987 102 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 RNU6-207P-201ENST00000384137 107 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AC245047.3-201ENST00000429428 127 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AL133396.1-201ENST00000432048 687 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AL392103.1-201ENST00000447000 198 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AL139824.2-201ENST00000458731 1095 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 SNORD4A-201ENST00000459174 72 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 RNU6-88P-201ENST00000606801 100 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AL139286.2-201ENST00000606838 396 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AC023158.2-201ENST00000614876 543 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 MIR4788-201ENST00000639104 80 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 SNORA1B-201ENST00000362535 133 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 MIR593-201ENST00000384856 100 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 MIR320C1-201ENST00000408566 88 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AC106883.1-201ENST00000418805 562 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 RNU6-475P-201ENST00000516073 104 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AC022616.3-201ENST00000523940 148 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 AC073539.2-201ENST00000597113 165 ntBASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC-0.24□□□□□ -2.45
CHD9Q3L8U1 SNORD114-12-201ENST00000365400 75 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 Y_RNA.472-201ENST00000384322 102 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 RNU6-320P-201ENST00000516511 106 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 RNU6-1247P-201ENST00000516622 98 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 AC018448.1-201ENST00000552843 316 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 AC092447.9-201ENST00000603395 144 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 OR4H6P-202ENST00000603819 340 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 AC007684.1-201ENST00000609671 477 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 AC122133.1-201ENST00000613964 233 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 AC093875.1-201ENST00000623688 504 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 MTND5P17-201ENST00000418405 1603 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 SNORA18.1-201ENST00000363418 128 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 RNU6-946P-201ENST00000383878 107 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 AC027419.1-201ENST00000522976 328 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 AC023050.3-201ENST00000541142 333 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 MIR5692A1-201ENST00000580523 69 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 AL139418.1-201ENST00000613613 177 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 AC131159.1-201ENST00000621854 213 ntBASIC-0.25□□□□□ -2.45
CHD9Q3L8U1 RNU6-125P-201ENST00000384505 107 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 MIR516B2-201ENST00000385190 85 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 AL117339.3-201ENST00000418733 162 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 AL360271.2-201ENST00000447710 161 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 Y_RNA.674-201ENST00000516362 113 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 AC010525.2-201ENST00000590920 195 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 AL354696.1-201ENST00000614652 497 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 RPS3AP3-201ENST00000411933 242 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 AC007283.2-201ENST00000424739 197 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 RNU7-165P-201ENST00000458864 60 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 RNU6-848P-201ENST00000515948 107 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 RNU6-1278P-201ENST00000516130 107 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 RNU6-617P-201ENST00000516147 107 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 RNU6-473P-201ENST00000516164 107 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 RNU7-99P-201ENST00000516271 62 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 RNU6-1225P-201ENST00000516336 65 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.26□□□□□ -2.45
CHD9Q3L8U1 AC105185.1-201ENST00000518705 535 ntBASIC-0.26□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 714.1 ms