Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 AC125232.2-201ENST00000592457 143 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 AC022217.4-201ENST00000604389 163 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 MIR8063-201ENST00000621930 81 ntBASIC1.13□□□□□ -2.23
RFX4Q33E94 Y_RNA.140-201ENST00000363474 103 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 Y_RNA.184-201ENST00000363884 108 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 RNU6-939P-201ENST00000384634 107 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 RNU6-510P-201ENST00000391239 108 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 RNU1-139P-201ENST00000391307 165 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 RPL21P1-201ENST00000399532 476 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 RNU6-1050P-201ENST00000410388 107 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 AC008134.1-201ENST00000420943 193 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 MTND4P18-201ENST00000447010 465 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 AC009474.2-201ENST00000451383 136 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.12□□□□□ -2.23
RFX4Q33E94 RPS26P45-201ENST00000471748 340 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 HMGN1P12-201ENST00000499125 195 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 RNU6-1114P-201ENST00000516022 107 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 SNORA31.10-201ENST00000516482 106 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 AL442163.3-201ENST00000554110 156 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 MIR3660-201ENST00000584845 100 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 7SK.7-201ENST00000603504 247 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 AC080078.2-201ENST00000603766 501 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 AC010999.1-201ENST00000611856 324 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 MTND5P35-201ENST00000557537 1720 ntBASIC1.12□□□□□ -2.23
RFX4Q33E94 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.12□□□□□ -2.23
RFX4Q33E94 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.11□□□□□ -2.23
RFX4Q33E94 MIR515-2-201ENST00000384883 83 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 MIR515-1-201ENST00000384884 83 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 SNORA12.1-201ENST00000390873 148 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 RNU4-62P-201ENST00000410125 130 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 RNU6-1001P-201ENST00000411265 100 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 AC010154.1-201ENST00000425857 269 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 USMG5P1-201ENST00000425964 177 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 AC108667.1-201ENST00000428618 249 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 USP9YP16-201ENST00000430287 407 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 AL353997.1-201ENST00000432936 108 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.11□□□□□ -2.23
RFX4Q33E94 USP9YP23-201ENST00000455085 407 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 U8.22-201ENST00000459141 133 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 RPL7P42-201ENST00000481005 679 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.11□□□□□ -2.23
RFX4Q33E94 Y_RNA.706-201ENST00000516933 99 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.11□□□□□ -2.23
RFX4Q33E94 AC024995.1-201ENST00000523014 93 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 AC093023.1-201ENST00000547375 507 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 MIR4421-201ENST00000578133 69 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 AL929325.1-201ENST00000603096 117 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 AC100812.1-201ENST00000607622 580 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 AC009229.3-201ENST00000608056 282 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 AL357075.2-201ENST00000614906 189 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 AL121890.5-201ENST00000620848 304 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 AC098679.4-201ENST00000624241 654 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 MTND5P16-201ENST00000460269 1703 ntBASIC1.11□□□□□ -2.23
RFX4Q33E94 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
RFX4Q33E94 Y_RNA.88-201ENST00000363029 99 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 RNU5F-3P-201ENST00000363767 117 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 Y_RNA.404-201ENST00000383978 102 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
RFX4Q33E94 RNA5SP323-201ENST00000391094 133 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 AC074085.1-201ENST00000413598 418 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 EIF1P2-201ENST00000428233 350 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 TOMM22P2-201ENST00000430735 237 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.1□□□□□ -2.23
RFX4Q33E94 AC027119.1-201ENST00000440877 241 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 MTND3P10-201ENST00000450967 341 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.1□□□□□ -2.23
RFX4Q33E94 AC019176.1-201ENST00000518519 225 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 AC105029.1-201ENST00000520250 669 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.1□□□□□ -2.23
RFX4Q33E94 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.1□□□□□ -2.23
RFX4Q33E94 MIR4709-201ENST00000577272 72 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.1□□□□□ -2.23
RFX4Q33E94 MIR4769-201ENST00000584126 77 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 AL359075.3-201ENST00000613288 217 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 U6.73-201ENST00000619194 103 ntBASIC1.1□□□□□ -2.23
RFX4Q33E94 MIR378A-201ENST00000362177 66 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 Y_RNA.2-201ENST00000362330 96 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 RNA5SP361-201ENST00000362686 118 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 Y_RNA.72-201ENST00000362894 103 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 RNU6-601P-201ENST00000384540 107 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 MIR329-1-201ENST00000385028 80 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.09□□□□□ -2.23
RFX4Q33E94 MIR190B-201ENST00000401119 79 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 MRPL35P1-201ENST00000404272 572 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 RNU6-1186P-201ENST00000410429 97 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 RNU4-14P-201ENST00000410858 122 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 AC004965.1-201ENST00000413033 213 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.09□□□□□ -2.23
RFX4Q33E94 COX6CP10-201ENST00000416832 224 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.09□□□□□ -2.23
RFX4Q33E94 SNORD65B-201ENST00000459126 73 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.09□□□□□ -2.23
RFX4Q33E94 RNU6-237P-201ENST00000515985 71 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 RNA5SP458-201ENST00000516188 119 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 Y_RNA.683-201ENST00000516508 93 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 RNU1-142P-201ENST00000516682 145 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 RNU7-30P-201ENST00000516835 62 ntBASIC1.09□□□□□ -2.23
RFX4Q33E94 MTND4LP26-201ENST00000518144 282 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms