Protein–RNA interactions for Protein: Q12829

RAB40B, Ras-related protein Rab-40B, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40BQ12829 AC027419.1-201ENST00000522976 328 ntBASIC1.18□□□□□ -2.22
RAB40BQ12829 AF235103.2-201ENST00000525753 346 ntBASIC1.18□□□□□ -2.22
RAB40BQ12829 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.18□□□□□ -2.22
RAB40BQ12829 PRR13P7-201ENST00000605538 430 ntBASIC1.18□□□□□ -2.22
RAB40BQ12829 AL365434.2-201ENST00000607979 234 ntBASIC1.18□□□□□ -2.22
RAB40BQ12829 AC021506.2-201ENST00000612354 169 ntBASIC1.18□□□□□ -2.22
RAB40BQ12829 AL133216.2-202ENST00000634512 349 ntBASIC1.18□□□□□ -2.22
RAB40BQ12829 AC068137.4-201ENST00000638485 296 ntBASIC1.18□□□□□ -2.22
RAB40BQ12829 Y_RNA.2-201ENST00000362330 96 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 RNU6-1123P-201ENST00000362347 106 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 RNU6-457P-201ENST00000363999 107 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 SNORD26-201ENST00000384147 75 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 RNU6-281P-201ENST00000384212 103 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 RNU6-1031P-201ENST00000384773 107 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 RNU6-700P-201ENST00000391043 107 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 Y_RNA.594-201ENST00000410373 140 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 RPL30P13-201ENST00000418873 348 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 SNX2P2-201ENST00000424553 323 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 TOMM22P2-201ENST00000430735 237 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.17□□□□□ -2.22
RAB40BQ12829 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.17□□□□□ -2.22
RAB40BQ12829 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.17□□□□□ -2.22
RAB40BQ12829 RN7SKP179-201ENST00000516126 217 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 RNA5SP458-201ENST00000516188 119 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 RNU7-99P-201ENST00000516271 62 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 SNORA31.10-201ENST00000516482 106 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 RNU7-128P-201ENST00000517247 62 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC1.17□□□□□ -2.22
RAB40BQ12829 AL121579.1-201ENST00000555129 305 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 SUB1P3-201ENST00000564581 315 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 AC005668.1-201ENST00000571142 476 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 AC090617.3-201ENST00000573670 475 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 MIR4438-201ENST00000585271 93 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 AP000942.3-201ENST00000603702 160 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 MIR8054-201ENST00000620877 86 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.17□□□□□ -2.22
RAB40BQ12829 AC027514.1-201ENST00000588561 1603 ntBASIC1.17□□□□□ -2.22
RAB40BQ12829 RNA5SP432-201ENST00000362480 116 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 RNU6-593P-201ENST00000364716 112 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 MIR190B-201ENST00000401119 79 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 MIR548K-201ENST00000408406 116 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 RN7SKP200-201ENST00000410564 320 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 RNU6-1001P-201ENST00000411265 100 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 FCF1P9-201ENST00000412546 282 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 MTND3P8-201ENST00000412909 339 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 AC074085.1-201ENST00000413598 418 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 SNORD65B-201ENST00000459126 73 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 RPL31P58-201ENST00000469001 379 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.16□□□□□ -2.22
RAB40BQ12829 RPS27P22-201ENST00000478056 241 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.16□□□□□ -2.22
RAB40BQ12829 AC008269.2-201ENST00000561915 1105 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 MIR5701-3-201ENST00000578890 82 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 MIR5701-1-201ENST00000585138 82 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 AC005014.2-201ENST00000607795 599 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 AL512598.1-201ENST00000610158 273 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 MIR5701-2-201ENST00000615634 82 ntBASIC1.16□□□□□ -2.22
RAB40BQ12829 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RAB40BQ12829 MIR26B-201ENST00000362251 77 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 Y_RNA.140-201ENST00000363474 103 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
RAB40BQ12829 MRPL42P3-201ENST00000401492 326 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 RNU6-1050P-201ENST00000410388 107 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 AC108667.1-201ENST00000428618 249 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 AL353997.1-201ENST00000432936 108 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 UQCRBP2-201ENST00000447827 297 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 MRPS10P1-201ENST00000448483 130 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 AC107399.1-201ENST00000451226 265 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 RNU1-123P-201ENST00000458950 160 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 RNU7-87P-201ENST00000459343 62 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 AC069439.1-201ENST00000494739 167 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 Y_RNA.708-201ENST00000516950 96 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.15□□□□□ -2.23
RAB40BQ12829 AC023157.2-201ENST00000540596 141 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.15□□□□□ -2.23
RAB40BQ12829 AC004584.2-201ENST00000570407 410 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 AC060780.3-201ENST00000589464 80 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 AC125232.2-201ENST00000592457 143 ntBASIC1.15□□□□□ -2.23
RAB40BQ12829 RNY1P16-201ENST00000363063 111 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 Y_RNA.364-201ENST00000365532 101 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 RNU6-601P-201ENST00000384540 107 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 RNU6-440P-201ENST00000390882 105 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 SNORA17.3-201ENST00000391159 129 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 Y_RNA.595-201ENST00000410403 105 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.14□□□□□ -2.23
RAB40BQ12829 SDAD1P3-201ENST00000427380 333 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 EIF1P2-201ENST00000428233 350 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.14□□□□□ -2.23
RAB40BQ12829 RNU7-94P-201ENST00000459576 63 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 AC010469.2-201ENST00000496412 480 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 AC010598.1-201ENST00000510378 103 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 AC046134.1-201ENST00000514454 666 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 Y_RNA.670-201ENST00000516255 105 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 SUMO2P16-201ENST00000519475 264 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 AP003033.1-201ENST00000527244 415 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.14□□□□□ -2.23
RAB40BQ12829 MIR4303-201ENST00000581299 66 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 AC011712.1-201ENST00000588959 234 ntBASIC1.14□□□□□ -2.23
RAB40BQ12829 AC068790.6-201ENST00000602558 258 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms