Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 U3.8-201ENST00000363675 217 ntBASIC1.11□□□□□ -2.23
HMGCS1Q01581 Y_RNA.179-201ENST00000363844 90 ntBASIC1.11□□□□□ -2.23
HMGCS1Q01581 RNU6-793P-201ENST00000384233 104 ntBASIC1.11□□□□□ -2.23
HMGCS1Q01581 RNU6-510P-201ENST00000391239 108 ntBASIC1.11□□□□□ -2.23
HMGCS1Q01581 MIR548K-201ENST00000408406 116 ntBASIC1.11□□□□□ -2.23
HMGCS1Q01581 MIR1285-1-201ENST00000408593 84 ntBASIC1.11□□□□□ -2.23
HMGCS1Q01581 AL139396.1-201ENST00000421137 167 ntBASIC1.11□□□□□ -2.23
HMGCS1Q01581 RPS3AP52-201ENST00000435639 297 ntBASIC1.11□□□□□ -2.23
HMGCS1Q01581 AC005002.2-201ENST00000438228 269 ntBASIC1.11□□□□□ -2.23
HMGCS1Q01581 RPL31P58-201ENST00000469001 379 ntBASIC1.11□□□□□ -2.23
HMGCS1Q01581 AC093852.1-201ENST00000503587 266 ntBASIC1.11□□□□□ -2.23
HMGCS1Q01581 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.11□□□□□ -2.23
HMGCS1Q01581 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.11□□□□□ -2.23
HMGCS1Q01581 AC018462.2-201ENST00000605375 395 ntBASIC1.11□□□□□ -2.23
HMGCS1Q01581 AC005014.2-201ENST00000607795 599 ntBASIC1.11□□□□□ -2.23
HMGCS1Q01581 Y_RNA.106-201ENST00000363189 100 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 RNU6-280P-201ENST00000364145 104 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 RNU6-281P-201ENST00000384212 103 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 RNU6-939P-201ENST00000384634 107 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 MIR194-1-201ENST00000384892 85 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 RNA5SP323-201ENST00000391094 133 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 RNU6-192P-201ENST00000391253 100 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 MTND3P8-201ENST00000412909 339 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 AC008134.1-201ENST00000420943 193 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 AL591704.2-201ENST00000421658 181 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 RPS27P16-201ENST00000425758 201 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 AC069257.2-201ENST00000441819 155 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 RPS27P1-201ENST00000450552 247 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 RNU6-1053P-201ENST00000515930 101 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 Y_RNA.670-201ENST00000516255 105 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 RNU6-358P-201ENST00000516564 75 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 AC091144.1-201ENST00000519573 138 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.1□□□□□ -2.23
HMGCS1Q01581 AC060780.3-201ENST00000589464 80 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 MIR6078-201ENST00000611069 100 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 AC010999.1-201ENST00000611856 324 ntBASIC1.1□□□□□ -2.23
HMGCS1Q01581 MTND5P16-201ENST00000460269 1703 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 Y_RNA.2-201ENST00000362330 96 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 SNORA72.2-201ENST00000365028 127 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 Y_RNA.339-201ENST00000365325 102 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.09□□□□□ -2.23
HMGCS1Q01581 RPL21P1-201ENST00000399532 476 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 Y_RNA.594-201ENST00000410373 140 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 RNU6-1050P-201ENST00000410388 107 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 RNU6-321P-201ENST00000410912 106 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 AC010154.1-201ENST00000425857 269 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 USMG5P1-201ENST00000425964 177 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 FTH1P12-201ENST00000432137 551 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 AC027119.1-201ENST00000440877 241 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 MTND4P18-201ENST00000447010 465 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.09□□□□□ -2.23
HMGCS1Q01581 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.09□□□□□ -2.23
HMGCS1Q01581 NDUFB4P10-201ENST00000452541 359 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.09□□□□□ -2.23
HMGCS1Q01581 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.09□□□□□ -2.23
HMGCS1Q01581 AC005840.1-201ENST00000498412 377 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 HMGN1P12-201ENST00000499125 195 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.09□□□□□ -2.23
HMGCS1Q01581 AC079140.2-201ENST00000506193 142 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 AC018710.1-201ENST00000506509 158 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 TRMT112P2-201ENST00000512910 132 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 AC093303.1-201ENST00000514549 295 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 RNU6-1016P-201ENST00000516689 94 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 Y_RNA.706-201ENST00000516933 99 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 AC019176.1-201ENST00000518519 225 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 AC019288.1-201ENST00000557918 224 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 MIR5701-3-201ENST00000578890 82 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 MIR5701-1-201ENST00000585138 82 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.09□□□□□ -2.23
HMGCS1Q01581 MIR5701-2-201ENST00000615634 82 ntBASIC1.09□□□□□ -2.23
HMGCS1Q01581 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.24
HMGCS1Q01581 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.09□□□□□ -2.24
HMGCS1Q01581 MTND5P35-201ENST00000557537 1720 ntBASIC1.09□□□□□ -2.24
HMGCS1Q01581 RNU6-874P-201ENST00000362390 105 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 RNU6-392P-201ENST00000364926 101 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 Y_RNA.490-201ENST00000384413 102 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 MIR515-2-201ENST00000384883 83 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 MIR515-1-201ENST00000384884 83 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 RNU1-139P-201ENST00000391307 165 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 RNU6-1186P-201ENST00000410429 97 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 AC074085.1-201ENST00000413598 418 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 COX6CP10-201ENST00000416832 224 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.08□□□□□ -2.24
HMGCS1Q01581 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.08□□□□□ -2.24
HMGCS1Q01581 RPL7P42-201ENST00000481005 679 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 RNU6-1114P-201ENST00000516022 107 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 RNU1-142P-201ENST00000516682 145 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 RNU7-128P-201ENST00000517247 62 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.08□□□□□ -2.24
HMGCS1Q01581 AC027419.1-201ENST00000522976 328 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 AC024995.1-201ENST00000523014 93 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.08□□□□□ -2.24
HMGCS1Q01581 AL442163.3-201ENST00000554110 156 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 MIR4709-201ENST00000577272 72 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 AC015688.6-201ENST00000577737 104 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 AL929325.1-201ENST00000603096 117 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 AC022217.4-201ENST00000604389 163 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 AC100812.1-201ENST00000607622 580 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 AL078604.3-201ENST00000615580 211 ntBASIC1.08□□□□□ -2.24
HMGCS1Q01581 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms