Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AC090897.1-201ENST00000580909 226 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC-0.29□□□□□ -2.46
HSPG2P98160 AL670379.3-201ENST00000605040 251 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC090186.1-201ENST00000605991 572 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 MIR15A-201ENST00000607334 83 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AL662814.1-201ENST00000617364 121 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 MIR6828-201ENST00000636181 60 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 AC092104.1-201ENST00000497346 1441 ntBASIC-0.29□□□□□ -2.46
HSPG2P98160 SNORA25.7-201ENST00000364375 127 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 RNU6-396P-201ENST00000365369 105 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 SNORD51.1-201ENST00000365405 77 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 SNORD14.1-201ENST00000365609 90 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 MTCO2P33-201ENST00000402100 465 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 AC007283.2-201ENST00000424739 197 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.3□□□□□ -2.46
HSPG2P98160 RNU6-344P-201ENST00000516635 111 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 MIR3192-201ENST00000584920 77 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 AC122133.1-201ENST00000613964 233 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 FRG1KP-201ENST00000623592 341 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC-0.3□□□□□ -2.46
HSPG2P98160 RNU6-97P-201ENST00000363387 104 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 RNU4-16P-201ENST00000364737 141 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 RNU6-440P-201ENST00000390882 105 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 AC008134.1-201ENST00000420943 193 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 AC078809.1-201ENST00000427601 140 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.3□□□□□ -2.46
HSPG2P98160 AP001372.4-201ENST00000524889 472 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 AL158042.1-201ENST00000605338 460 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 AC104458.1-201ENST00000608243 463 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 U6.42-201ENST00000618440 107 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 AC131159.1-201ENST00000621854 213 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 RNU6-545P-201ENST00000362681 104 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 SNORD56.4-201ENST00000363883 71 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 AC117470.1-201ENST00000381974 330 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 MIR196A1-201ENST00000388006 70 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.3□□□□□ -2.46
HSPG2P98160 AC091959.1-201ENST00000495857 238 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 RNU6-583P-201ENST00000516012 92 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 RNU6-1265P-201ENST00000516342 103 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 DEFB130C-202ENST00000530001 230 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 AC018448.1-201ENST00000552843 316 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 AL117336.2-201ENST00000602435 335 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 AL022154.1-201ENST00000604698 785 ntBASIC-0.3□□□□□ -2.46
HSPG2P98160 RNU5A-8P-201ENST00000364102 114 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 RNU5E-6P-201ENST00000365574 115 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 MIR15B-201ENST00000385045 98 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 MIR1253-201ENST00000408273 105 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 MIR1283-1-201ENST00000408494 87 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 RNA5SP201-201ENST00000410316 124 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 RNU2-8P-201ENST00000410727 190 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 AC092809.3-201ENST00000415453 231 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 EEF1E1P1-201ENST00000446998 430 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 AC013470.1-201ENST00000453438 462 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 RNU7-41P-201ENST00000515917 61 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 Y_RNA.689-201ENST00000516589 107 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 AL096861.1-201ENST00000610899 123 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC-0.31□□□□□ -2.46
HSPG2P98160 AL953862.1-201ENST00000423016 168 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.31□□□□□ -2.46
HSPG2P98160 AC093899.1-201ENST00000457984 376 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 AC107297.1-201ENST00000459991 176 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.31□□□□□ -2.46
HSPG2P98160 RNU6-377P-201ENST00000515965 102 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 RNU6-475P-201ENST00000516073 104 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 RNY4-201ENST00000516507 96 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.31□□□□□ -2.46
HSPG2P98160 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-0.31□□□□□ -2.46
HSPG2P98160 AC087883.1-201ENST00000551882 391 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 AC026470.2-201ENST00000561492 181 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 SNORA67.2-201ENST00000384300 149 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 Y_RNA.562-201ENST00000384695 113 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 RNU6-817P-201ENST00000391083 104 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 MTND4LP14-201ENST00000429447 288 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 Z98949.2-201ENST00000440996 144 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 AC087499.4-201ENST00000448505 178 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 HGF-207ENST00000453018 721 ntTSL 3 BASIC-0.31□□□□□ -2.46
HSPG2P98160 SNORA43.2-201ENST00000516652 128 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 RNU2-56P-201ENST00000516826 190 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 RNU6-897P-201ENST00000517135 105 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 MTND2P38-201ENST00000522536 667 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 ELOCP32-201ENST00000548625 324 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 AC115989.2-201ENST00000578640 563 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 U7.6-201ENST00000610841 64 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 MIR6514-201ENST00000622549 70 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 MIR148A-201ENST00000362215 68 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 Y_RNA.78-201ENST00000362970 110 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 RNU6-1005P-201ENST00000384519 107 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 RNU6-1186P-201ENST00000410429 97 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 TIMM9P3-201ENST00000428659 274 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 AC007327.1-201ENST00000447461 264 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 RNU7-156P-201ENST00000517214 74 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 MIR5692A1-201ENST00000580523 69 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 AC068790.2-201ENST00000602601 557 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 OR4H6P-202ENST00000603819 340 ntBASIC-0.31□□□□□ -2.46
HSPG2P98160 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.31□□□□□ -2.46
HSPG2P98160 RNU6-580P-201ENST00000365159 107 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms