Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AL390123.1-201ENST00000603216 237 ntBASIC1.75□□□□□ -2.13
CX3CL1P78423 AC069114.2-201ENST00000604699 304 ntBASIC1.75□□□□□ -2.13
CX3CL1P78423 AL121655.1-201ENST00000605811 308 ntBASIC1.75□□□□□ -2.13
CX3CL1P78423 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.75□□□□□ -2.13
CX3CL1P78423 AC010205.1-201ENST00000616668 449 ntBASIC1.75□□□□□ -2.13
CX3CL1P78423 MIR6132-201ENST00000622083 109 ntBASIC1.75□□□□□ -2.13
CX3CL1P78423 AC091932.3-201ENST00000624223 323 ntBASIC1.75□□□□□ -2.13
CX3CL1P78423 GS1-279B7.1-204ENST00000641809 378 ntBASIC1.75□□□□□ -2.13
CX3CL1P78423 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
CX3CL1P78423 MTND5P6-201ENST00000422338 1798 ntBASIC1.75□□□□□ -2.13
CX3CL1P78423 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.74□□□□□ -2.13
CX3CL1P78423 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
CX3CL1P78423 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
CX3CL1P78423 AC008555.8-201ENST00000623602 2168 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 SNORD14.1-201ENST00000365609 90 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 RNU6-1227P-201ENST00000383981 107 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 RNU6-1310P-201ENST00000384153 107 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 Y_RNA.458-201ENST00000384240 102 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 U3.40-201ENST00000408706 208 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 SNORA11.4-201ENST00000408823 129 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 RNA5SP475-201ENST00000410568 110 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 AL356379.1-201ENST00000414105 126 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 CST2P1-201ENST00000425770 87 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.74□□□□□ -2.13
CX3CL1P78423 RPEP5-201ENST00000441137 268 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 RNU6-717P-201ENST00000459076 104 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 SNORD65B-201ENST00000459126 73 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 AC008413.1-201ENST00000511864 177 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 RNA5SP200-201ENST00000516360 103 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.74□□□□□ -2.13
CX3CL1P78423 SUB1P4-201ENST00000566062 339 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 MIR4435-1-201ENST00000582552 80 ntBASIC1.74□□□□□ -2.13
CX3CL1P78423 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.74□□□□□ -2.13
CX3CL1P78423 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
CX3CL1P78423 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.74□□□□□ -2.13
CX3CL1P78423 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CX3CL1P78423 RNU6-694P-201ENST00000364071 147 ntBASIC1.73□□□□□ -2.13
CX3CL1P78423 RNU4-50P-201ENST00000364361 141 ntBASIC1.73□□□□□ -2.13
CX3CL1P78423 RNU6-450P-201ENST00000364654 107 ntBASIC1.73□□□□□ -2.13
CX3CL1P78423 Y_RNA.424-201ENST00000384063 103 ntBASIC1.73□□□□□ -2.13
CX3CL1P78423 RNU6-20P-201ENST00000384106 107 ntBASIC1.73□□□□□ -2.13
CX3CL1P78423 AL079342.1-201ENST00000401460 267 ntBASIC1.73□□□□□ -2.13
CX3CL1P78423 RNA5SP508-201ENST00000411327 119 ntBASIC1.73□□□□□ -2.13
CX3CL1P78423 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.73□□□□□ -2.13
CX3CL1P78423 AC005534.2-201ENST00000431047 433 ntBASIC1.73□□□□□ -2.13
CX3CL1P78423 SNORA59A-201ENST00000459326 152 ntBASIC1.73□□□□□ -2.13
CX3CL1P78423 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CX3CL1P78423 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.73□□□□□ -2.13
CX3CL1P78423 AC005176.2-201ENST00000596933 147 ntBASIC1.73□□□□□ -2.13
CX3CL1P78423 AC104695.3-201ENST00000604052 296 ntBASIC1.73□□□□□ -2.13
CX3CL1P78423 AC016925.2-201ENST00000605108 242 ntBASIC1.73□□□□□ -2.13
CX3CL1P78423 MIR6873-201ENST00000622788 63 ntBASIC1.73□□□□□ -2.13
CX3CL1P78423 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CX3CL1P78423 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
CX3CL1P78423 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
CX3CL1P78423 SNORA72.2-201ENST00000365028 127 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 RNA5SP138-201ENST00000365098 114 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 Y_RNA.471-201ENST00000384312 102 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 SNORA48.3-201ENST00000391081 134 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 RNA5SP467-201ENST00000391274 118 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 AL355796.1-201ENST00000406706 323 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 RNA5SP100-201ENST00000410903 110 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 RNA5SP59-201ENST00000410922 110 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 AL135786.1-201ENST00000415892 214 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.72□□□□□ -2.13
CX3CL1P78423 AL356320.1-201ENST00000429616 163 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 AC245047.4-201ENST00000433189 144 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.72□□□□□ -2.13
CX3CL1P78423 SCARNA16.3-201ENST00000516595 184 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 MIR514B-201ENST00000516774 80 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 RNU1-40P-201ENST00000516816 164 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 RNU1-97P-201ENST00000516872 164 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 RNU2-12P-201ENST00000517216 168 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 AC027419.1-201ENST00000522976 328 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.72□□□□□ -2.13
CX3CL1P78423 MIR4299-201ENST00000577899 72 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 AC124312.5-201ENST00000604451 268 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 Y_RNA.772-201ENST00000606692 102 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 AL021879.1-201ENST00000611756 288 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 PART1_1.1-201ENST00000611761 217 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 AC004467.1-201ENST00000615678 330 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 AL590808.1-201ENST00000618696 141 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 SDR42E1P4-201ENST00000620894 481 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 U6.115-201ENST00000636045 103 ntBASIC1.72□□□□□ -2.13
CX3CL1P78423 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC1.71□□□□□ -2.14
CX3CL1P78423 Y_RNA.101-201ENST00000363154 102 ntBASIC1.71□□□□□ -2.14
CX3CL1P78423 RNU6-626P-201ENST00000363354 107 ntBASIC1.71□□□□□ -2.14
CX3CL1P78423 Y_RNA.158-201ENST00000363651 101 ntBASIC1.71□□□□□ -2.14
CX3CL1P78423 Y_RNA.202-201ENST00000364083 110 ntBASIC1.71□□□□□ -2.14
CX3CL1P78423 SNORA20B-201ENST00000384220 132 ntBASIC1.71□□□□□ -2.14
CX3CL1P78423 MIR515-2-201ENST00000384883 83 ntBASIC1.71□□□□□ -2.14
CX3CL1P78423 MIR515-1-201ENST00000384884 83 ntBASIC1.71□□□□□ -2.14
CX3CL1P78423 RNU6-823P-201ENST00000391042 103 ntBASIC1.71□□□□□ -2.14
CX3CL1P78423 RNU6-130P-201ENST00000411112 103 ntBASIC1.71□□□□□ -2.14
CX3CL1P78423 AC244636.1-201ENST00000421152 228 ntBASIC1.71□□□□□ -2.14
CX3CL1P78423 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.71□□□□□ -2.14
CX3CL1P78423 AC005002.2-201ENST00000438228 269 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 116.4 ms