Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
RAE1P78406 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.3□□□□□ -2.04
RAE1P78406 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC2.3□□□□□ -2.04
RAE1P78406 AC016717.2-201ENST00000609089 5141 ntBASIC2.3□□□□□ -2.04
RAE1P78406 SNORA25.1-201ENST00000362326 128 ntBASIC2.3□□□□□ -2.04
RAE1P78406 VTRNA1-1-201ENST00000363120 99 ntBASIC2.3□□□□□ -2.04
RAE1P78406 Y_RNA.352-201ENST00000365439 102 ntBASIC2.3□□□□□ -2.04
RAE1P78406 RNU6-514P-201ENST00000384208 107 ntBASIC2.3□□□□□ -2.04
RAE1P78406 Y_RNA.478-201ENST00000384358 107 ntBASIC2.3□□□□□ -2.04
RAE1P78406 SNORD14D-201ENST00000384390 87 ntBASIC2.3□□□□□ -2.04
RAE1P78406 MIR196B-201ENST00000384852 84 ntBASIC2.3□□□□□ -2.04
RAE1P78406 AL359511.1-201ENST00000402970 211 ntBASIC2.3□□□□□ -2.04
RAE1P78406 EDDM3CP-201ENST00000415977 425 ntBASIC2.3□□□□□ -2.04
RAE1P78406 AC008134.1-201ENST00000420943 193 ntBASIC2.3□□□□□ -2.04
RAE1P78406 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.3□□□□□ -2.04
RAE1P78406 MTND1P19-201ENST00000511780 315 ntBASIC2.3□□□□□ -2.04
RAE1P78406 SNORA4.4-201ENST00000515921 135 ntBASIC2.3□□□□□ -2.04
RAE1P78406 RNU6-1023P-201ENST00000516137 106 ntBASIC2.3□□□□□ -2.04
RAE1P78406 RNU6-436P-201ENST00000516171 114 ntBASIC2.3□□□□□ -2.04
RAE1P78406 RNA5SP148-201ENST00000516527 94 ntBASIC2.3□□□□□ -2.04
RAE1P78406 AC087441.2-201ENST00000529141 262 ntBASIC2.3□□□□□ -2.04
RAE1P78406 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC2.3□□□□□ -2.04
RAE1P78406 AC067747.1-201ENST00000608026 250 ntBASIC2.3□□□□□ -2.04
RAE1P78406 AL137847.3-201ENST00000611521 109 ntBASIC2.3□□□□□ -2.04
RAE1P78406 MIR6817-201ENST00000615588 66 ntBASIC2.3□□□□□ -2.04
RAE1P78406 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
RAE1P78406 RNU6-1266P-201ENST00000362794 105 ntBASIC2.29□□□□□ -2.04
RAE1P78406 SNORA38-201ENST00000363946 132 ntBASIC2.29□□□□□ -2.04
RAE1P78406 Y_RNA.416-201ENST00000384014 113 ntBASIC2.29□□□□□ -2.04
RAE1P78406 Y_RNA.476-201ENST00000384347 108 ntBASIC2.29□□□□□ -2.04
RAE1P78406 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
RAE1P78406 MTCO1P5-201ENST00000433573 344 ntBASIC2.29□□□□□ -2.04
RAE1P78406 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
RAE1P78406 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC2.29□□□□□ -2.04
RAE1P78406 Y_RNA.680-201ENST00000516441 93 ntBASIC2.29□□□□□ -2.04
RAE1P78406 SCARNA24.2-201ENST00000516968 130 ntBASIC2.29□□□□□ -2.04
RAE1P78406 AC025647.1-201ENST00000517879 253 ntBASIC2.29□□□□□ -2.04
RAE1P78406 CYCSP26-201ENST00000534107 320 ntBASIC2.29□□□□□ -2.04
RAE1P78406 MIR3128-201ENST00000581957 66 ntBASIC2.29□□□□□ -2.04
RAE1P78406 DEFB117-201ENST00000602356 141 ntBASIC2.29□□□□□ -2.04
RAE1P78406 AC013412.1-201ENST00000610687 192 ntBASIC2.29□□□□□ -2.04
RAE1P78406 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
RAE1P78406 AL365361.1-201ENST00000566942 3481 ntBASIC2.29□□□□□ -2.04
RAE1P78406 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
RAE1P78406 AL159152.1-201ENST00000635019 2587 ntBASIC2.28□□□□□ -2.04
RAE1P78406 SNORD114-7-201ENST00000362520 77 ntBASIC2.28□□□□□ -2.04
RAE1P78406 Y_RNA.60-201ENST00000362831 98 ntBASIC2.28□□□□□ -2.04
RAE1P78406 RNU6-324P-201ENST00000363957 106 ntBASIC2.28□□□□□ -2.04
RAE1P78406 Y_RNA.329-201ENST00000365209 107 ntBASIC2.28□□□□□ -2.04
RAE1P78406 RNU1-51P-201ENST00000365345 176 ntBASIC2.28□□□□□ -2.04
RAE1P78406 RNU1-148P-201ENST00000384472 162 ntBASIC2.28□□□□□ -2.04
RAE1P78406 MIR1262-201ENST00000408276 93 ntBASIC2.28□□□□□ -2.04
RAE1P78406 RN7SKP284-201ENST00000411002 343 ntBASIC2.28□□□□□ -2.04
RAE1P78406 AC016909.1-201ENST00000415916 166 ntBASIC2.28□□□□□ -2.04
RAE1P78406 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.28□□□□□ -2.04
RAE1P78406 AC026271.5-201ENST00000577873 130 ntBASIC2.28□□□□□ -2.04
RAE1P78406 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RAE1P78406 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
RAE1P78406 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RAE1P78406 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.27□□□□□ -2.05
RAE1P78406 Y_RNA.44-201ENST00000362676 108 ntBASIC2.27□□□□□ -2.05
RAE1P78406 RNU4-80P-201ENST00000363200 141 ntBASIC2.27□□□□□ -2.05
RAE1P78406 SNORA5B-201ENST00000363786 132 ntBASIC2.27□□□□□ -2.05
RAE1P78406 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.27□□□□□ -2.05
RAE1P78406 AC245102.2-201ENST00000448956 180 ntBASIC2.27□□□□□ -2.05
RAE1P78406 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.27□□□□□ -2.05
RAE1P78406 RNU1-131P-201ENST00000458943 161 ntBASIC2.27□□□□□ -2.05
RAE1P78406 AP001486.1-201ENST00000463339 476 ntBASIC2.27□□□□□ -2.05
RAE1P78406 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC2.27□□□□□ -2.05
RAE1P78406 AC091959.1-201ENST00000495857 238 ntBASIC2.27□□□□□ -2.05
RAE1P78406 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
RAE1P78406 AC026436.1-201ENST00000510537 270 ntBASIC2.27□□□□□ -2.05
RAE1P78406 SNORA70.12-201ENST00000516084 153 ntBASIC2.27□□□□□ -2.05
RAE1P78406 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC2.27□□□□□ -2.05
RAE1P78406 MIR3145-201ENST00000580727 82 ntBASIC2.27□□□□□ -2.05
RAE1P78406 MIR4658-201ENST00000584344 65 ntBASIC2.27□□□□□ -2.05
RAE1P78406 AC006435.5-201ENST00000624486 112 ntBASIC2.27□□□□□ -2.05
RAE1P78406 MIR1291-201ENST00000627649 87 ntBASIC2.27□□□□□ -2.05
RAE1P78406 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.26□□□□□ -2.05
RAE1P78406 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
RAE1P78406 Y_RNA.20-201ENST00000362479 113 ntBASIC2.26□□□□□ -2.05
RAE1P78406 RNU6-379P-201ENST00000363813 104 ntBASIC2.26□□□□□ -2.05
RAE1P78406 Y_RNA.477-201ENST00000384352 108 ntBASIC2.26□□□□□ -2.05
RAE1P78406 RNU6-160P-201ENST00000384591 107 ntBASIC2.26□□□□□ -2.05
RAE1P78406 RNU6-1248P-201ENST00000391096 64 ntBASIC2.26□□□□□ -2.05
RAE1P78406 MIR873-201ENST00000401120 77 ntBASIC2.26□□□□□ -2.05
RAE1P78406 AL355796.1-201ENST00000406706 323 ntBASIC2.26□□□□□ -2.05
RAE1P78406 AL603910.2-201ENST00000407268 136 ntBASIC2.26□□□□□ -2.05
RAE1P78406 RNU2-61P-201ENST00000411069 191 ntBASIC2.26□□□□□ -2.05
RAE1P78406 HMGN2P35-201ENST00000412164 270 ntBASIC2.26□□□□□ -2.05
RAE1P78406 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.26□□□□□ -2.05
RAE1P78406 AC024067.1-201ENST00000426199 223 ntBASIC2.26□□□□□ -2.05
RAE1P78406 SNORD65B-201ENST00000459126 73 ntBASIC2.26□□□□□ -2.05
RAE1P78406 AC010598.1-201ENST00000510378 103 ntBASIC2.26□□□□□ -2.05
RAE1P78406 RNU6-191P-201ENST00000516295 94 ntBASIC2.26□□□□□ -2.05
RAE1P78406 AC021785.1-201ENST00000520780 453 ntTSL 3 BASIC2.26□□□□□ -2.05
RAE1P78406 AC103810.6-201ENST00000606708 136 ntBASIC2.26□□□□□ -2.05
RAE1P78406 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.26□□□□□ -2.05
RAE1P78406 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
RAE1P78406 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.25□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 113.2 ms