Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.88□□□□□ -2.11
PRAMEP78395 RN7SL853P-201ENST00000617250 223 ntBASIC1.88□□□□□ -2.11
PRAMEP78395 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
PRAMEP78395 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.88□□□□□ -2.11
PRAMEP78395 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
PRAMEP78395 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.87□□□□□ -2.11
PRAMEP78395 RNU5E-4P-201ENST00000364931 120 ntBASIC1.87□□□□□ -2.11
PRAMEP78395 MIR520A-201ENST00000384862 85 ntBASIC1.87□□□□□ -2.11
PRAMEP78395 Y_RNA.579-201ENST00000390939 94 ntBASIC1.87□□□□□ -2.11
PRAMEP78395 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.87□□□□□ -2.11
PRAMEP78395 AF228730.4-201ENST00000421457 183 ntBASIC1.87□□□□□ -2.11
PRAMEP78395 ZNF355P-201ENST00000427301 3216 ntBASIC1.87□□□□□ -2.11
PRAMEP78395 TOMM22P2-201ENST00000430735 237 ntBASIC1.87□□□□□ -2.11
PRAMEP78395 AC099799.1-201ENST00000439809 192 ntBASIC1.87□□□□□ -2.11
PRAMEP78395 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.87□□□□□ -2.11
PRAMEP78395 RNU6-625P-201ENST00000459412 107 ntBASIC1.87□□□□□ -2.11
PRAMEP78395 RPS29P21-201ENST00000496272 170 ntBASIC1.87□□□□□ -2.11
PRAMEP78395 HMGB3P17-201ENST00000504195 649 ntBASIC1.87□□□□□ -2.11
PRAMEP78395 RNA5SP437-201ENST00000517249 129 ntBASIC1.87□□□□□ -2.11
PRAMEP78395 AC104985.2-201ENST00000620598 500 ntBASIC1.87□□□□□ -2.11
PRAMEP78395 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC1.87□□□□□ -2.11
PRAMEP78395 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.87□□□□□ -2.11
PRAMEP78395 SNORA16.1-201ENST00000364597 132 ntBASIC1.86□□□□□ -2.11
PRAMEP78395 RNU4-42P-201ENST00000364738 142 ntBASIC1.86□□□□□ -2.11
PRAMEP78395 RNU6-1264P-201ENST00000383891 107 ntBASIC1.86□□□□□ -2.11
PRAMEP78395 Y_RNA.428-201ENST00000384078 102 ntBASIC1.86□□□□□ -2.11
PRAMEP78395 RNU6-708P-201ENST00000384217 107 ntBASIC1.86□□□□□ -2.11
PRAMEP78395 RNU6-1186P-201ENST00000410429 97 ntBASIC1.86□□□□□ -2.11
PRAMEP78395 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.86□□□□□ -2.11
PRAMEP78395 CHEK2P4-201ENST00000450340 246 ntBASIC1.86□□□□□ -2.11
PRAMEP78395 SNORD65B-201ENST00000459126 73 ntBASIC1.86□□□□□ -2.11
PRAMEP78395 AC027575.1-201ENST00000481064 460 ntBASIC1.86□□□□□ -2.11
PRAMEP78395 AC074133.1-201ENST00000515696 183 ntBASIC1.86□□□□□ -2.11
PRAMEP78395 RNU6-408P-201ENST00000515910 100 ntBASIC1.86□□□□□ -2.11
PRAMEP78395 SNORD116.3-201ENST00000517176 78 ntBASIC1.86□□□□□ -2.11
PRAMEP78395 AL117336.2-201ENST00000602435 335 ntBASIC1.86□□□□□ -2.11
PRAMEP78395 AC103810.8-201ENST00000607347 118 ntBASIC1.86□□□□□ -2.11
PRAMEP78395 U2.1-201ENST00000618978 145 ntBASIC1.86□□□□□ -2.11
PRAMEP78395 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.86□□□□□ -2.11
PRAMEP78395 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.85□□□□□ -2.11
PRAMEP78395 MIR628-201ENST00000385229 95 ntBASIC1.85□□□□□ -2.11
PRAMEP78395 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.85□□□□□ -2.11
PRAMEP78395 RAB28P5-201ENST00000427490 651 ntBASIC1.85□□□□□ -2.11
PRAMEP78395 AC005002.2-201ENST00000438228 269 ntBASIC1.85□□□□□ -2.11
PRAMEP78395 HSPE1P9-201ENST00000440046 311 ntBASIC1.85□□□□□ -2.11
PRAMEP78395 AC073910.1-201ENST00000445047 438 ntBASIC1.85□□□□□ -2.11
PRAMEP78395 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.85□□□□□ -2.11
PRAMEP78395 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.85□□□□□ -2.11
PRAMEP78395 AL163195.1-201ENST00000496941 348 ntBASIC1.85□□□□□ -2.11
PRAMEP78395 AP002001.1-203ENST00000534002 267 ntBASIC1.85□□□□□ -2.11
PRAMEP78395 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
PRAMEP78395 Y_RNA.315-201ENST00000365117 102 ntBASIC1.84□□□□□ -2.11
PRAMEP78395 Y_RNA.419-201ENST00000384041 102 ntBASIC1.84□□□□□ -2.11
PRAMEP78395 AL079342.1-201ENST00000401460 267 ntBASIC1.84□□□□□ -2.11
PRAMEP78395 RNA5SP475-201ENST00000410568 110 ntBASIC1.84□□□□□ -2.11
PRAMEP78395 RPL31P63-201ENST00000422565 375 ntBASIC1.84□□□□□ -2.11
PRAMEP78395 SRP72-202ENST00000504757 745 ntTSL 2 BASIC1.84□□□□□ -2.11
PRAMEP78395 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
PRAMEP78395 RNU1-142P-201ENST00000516682 145 ntBASIC1.84□□□□□ -2.11
PRAMEP78395 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.84□□□□□ -2.11
PRAMEP78395 AC023157.2-201ENST00000540596 141 ntBASIC1.84□□□□□ -2.11
PRAMEP78395 AL442163.3-201ENST00000554110 156 ntBASIC1.84□□□□□ -2.11
PRAMEP78395 AC138305.3-201ENST00000624988 240 ntBASIC1.84□□□□□ -2.11
PRAMEP78395 ANKRD30BP1-201ENST00000451052 2186 ntBASIC1.83□□□□□ -2.12
PRAMEP78395 AL356292.1-201ENST00000283110 373 ntBASIC1.83□□□□□ -2.12
PRAMEP78395 RNU6-1115P-201ENST00000362490 106 ntBASIC1.83□□□□□ -2.12
PRAMEP78395 Y_RNA.496-201ENST00000384444 101 ntBASIC1.83□□□□□ -2.12
PRAMEP78395 EBAG9P1-201ENST00000418955 543 ntBASIC1.83□□□□□ -2.12
PRAMEP78395 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.83□□□□□ -2.12
PRAMEP78395 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.83□□□□□ -2.12
PRAMEP78395 AC010469.2-201ENST00000496412 480 ntBASIC1.83□□□□□ -2.12
PRAMEP78395 HMGN1P13-201ENST00000505795 138 ntBASIC1.83□□□□□ -2.12
PRAMEP78395 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC1.83□□□□□ -2.12
PRAMEP78395 AL137100.2-201ENST00000555786 315 ntBASIC1.83□□□□□ -2.12
PRAMEP78395 AC006600.1-201ENST00000572529 153 ntBASIC1.83□□□□□ -2.12
PRAMEP78395 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.83□□□□□ -2.12
PRAMEP78395 AC116312.1-201ENST00000606841 314 ntBASIC1.83□□□□□ -2.12
PRAMEP78395 AL359075.3-201ENST00000613288 217 ntBASIC1.83□□□□□ -2.12
PRAMEP78395 AC011476.5-201ENST00000615594 130 ntBASIC1.83□□□□□ -2.12
PRAMEP78395 MIR3674-201ENST00000636576 68 ntBASIC1.83□□□□□ -2.12
PRAMEP78395 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
PRAMEP78395 RNU6-961P-201ENST00000363893 105 ntBASIC1.82□□□□□ -2.12
PRAMEP78395 SNORA63D-201ENST00000364359 132 ntBASIC1.82□□□□□ -2.12
PRAMEP78395 RNA5SP109-201ENST00000391010 116 ntBASIC1.82□□□□□ -2.12
PRAMEP78395 AC022028.1-201ENST00000412054 408 ntBASIC1.82□□□□□ -2.12
PRAMEP78395 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.82□□□□□ -2.12
PRAMEP78395 HSPE1P21-201ENST00000438283 308 ntBASIC1.82□□□□□ -2.12
PRAMEP78395 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
PRAMEP78395 AC007677.1-201ENST00000445757 515 ntBASIC1.82□□□□□ -2.12
PRAMEP78395 HMGN2P23-201ENST00000456759 269 ntBASIC1.82□□□□□ -2.12
PRAMEP78395 RPS27P22-201ENST00000478056 241 ntBASIC1.82□□□□□ -2.12
PRAMEP78395 RPL36AP21-201ENST00000490372 323 ntBASIC1.82□□□□□ -2.12
PRAMEP78395 AC107393.1-201ENST00000512403 346 ntBASIC1.82□□□□□ -2.12
PRAMEP78395 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.82□□□□□ -2.12
PRAMEP78395 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.82□□□□□ -2.12
PRAMEP78395 AC110588.1-201ENST00000559699 137 ntBASIC1.82□□□□□ -2.12
PRAMEP78395 AC022432.1-201ENST00000595739 310 ntBASIC1.82□□□□□ -2.12
PRAMEP78395 AC092447.9-201ENST00000603395 144 ntBASIC1.82□□□□□ -2.12
PRAMEP78395 AL133255.1-201ENST00000606374 441 ntBASIC1.82□□□□□ -2.12
PRAMEP78395 U6.73-201ENST00000619194 103 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 94.6 ms