Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 RNU6-1026P-201ENST00000384465 108 ntBASIC-2.31□□□□□ -2.78
RPL39P62891 SNORD28-201ENST00000384706 75 ntBASIC-2.31□□□□□ -2.78
RPL39P62891 MIR125B2-201ENST00000385128 89 ntBASIC-2.31□□□□□ -2.78
RPL39P62891 snoU13.16-201ENST00000459350 104 ntBASIC-2.31□□□□□ -2.78
RPL39P62891 SNORD38.3-201ENST00000516599 73 ntBASIC-2.31□□□□□ -2.78
RPL39P62891 MIR5591-201ENST00000578248 65 ntBASIC-2.31□□□□□ -2.78
RPL39P62891 SNORD45.3-201ENST00000363836 72 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 Y_RNA.181-201ENST00000363872 101 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 RNA5SP331-201ENST00000364986 107 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 RNU6-396P-201ENST00000365369 105 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 SNORD115-44-201ENST00000365391 82 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 RNU6-637P-201ENST00000384050 107 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 MIR147A-201ENST00000385079 72 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 MIR517B-201ENST00000385102 67 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 HSFY7P-201ENST00000432672 318 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 HSFY8P-201ENST00000437934 318 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-2.32□□□□□ -2.78
RPL39P62891 RNU5F-4P-201ENST00000516581 114 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 SNORA74.3-201ENST00000517108 154 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 ZNF971P-201ENST00000562068 1249 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 AC095057.3-201ENST00000567102 1157 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 RNU6-86P-201ENST00000606534 107 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 AC099654.9-201ENST00000637055 678 ntBASIC-2.32□□□□□ -2.78
RPL39P62891 Y_RNA.125-201ENST00000363371 111 ntBASIC-2.33□□□□□ -2.78
RPL39P62891 AL122001.1-201ENST00000457027 370 ntBASIC-2.33□□□□□ -2.78
RPL39P62891 SNORA31.19-201ENST00000517079 126 ntBASIC-2.33□□□□□ -2.78
RPL39P62891 MIR4639-201ENST00000584938 69 ntBASIC-2.33□□□□□ -2.78
RPL39P62891 AC110760.3-201ENST00000598794 467 ntBASIC-2.33□□□□□ -2.78
RPL39P62891 RNU6-490P-201ENST00000362985 107 ntBASIC-2.34□□□□□ -2.78
RPL39P62891 Y_RNA.121-201ENST00000363309 113 ntBASIC-2.34□□□□□ -2.78
RPL39P62891 SNORA40C-201ENST00000391285 128 ntBASIC-2.34□□□□□ -2.78
RPL39P62891 AC016831.2-201ENST00000417179 352 ntBASIC-2.34□□□□□ -2.78
RPL39P62891 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC-2.34□□□□□ -2.78
RPL39P62891 VN1R88P-201ENST00000596787 292 ntBASIC-2.34□□□□□ -2.78
RPL39P62891 AL354696.1-201ENST00000614652 497 ntBASIC-2.34□□□□□ -2.78
RPL39P62891 MIR365A-201ENST00000362260 87 ntBASIC-2.35□□□□□ -2.79
RPL39P62891 SNORA22B-201ENST00000383876 138 ntBASIC-2.35□□□□□ -2.79
RPL39P62891 Y_RNA.488-201ENST00000384403 102 ntBASIC-2.35□□□□□ -2.79
RPL39P62891 SNORD56B-201ENST00000384713 71 ntBASIC-2.35□□□□□ -2.79
RPL39P62891 MIR518B-201ENST00000385127 83 ntBASIC-2.35□□□□□ -2.79
RPL39P62891 RNU6-817P-201ENST00000391083 104 ntBASIC-2.35□□□□□ -2.79
RPL39P62891 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-2.35□□□□□ -2.79
RPL39P62891 AC022137.1-201ENST00000483735 151 ntBASIC-2.35□□□□□ -2.79
RPL39P62891 AC113347.3-201ENST00000509113 148 ntBASIC-2.35□□□□□ -2.79
RPL39P62891 AC110760.3-202ENST00000515177 371 ntBASIC-2.35□□□□□ -2.79
RPL39P62891 snoU83B.1-201ENST00000517136 88 ntBASIC-2.35□□□□□ -2.79
RPL39P62891 RNU7-156P-201ENST00000517214 74 ntBASIC-2.35□□□□□ -2.79
RPL39P62891 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC-2.35□□□□□ -2.79
RPL39P62891 AP001372.4-201ENST00000524889 472 ntBASIC-2.35□□□□□ -2.79
RPL39P62891 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-2.35□□□□□ -2.79
RPL39P62891 AC124016.2-201ENST00000610058 665 ntBASIC-2.35□□□□□ -2.79
RPL39P62891 RNU4-28P-201ENST00000364739 141 ntBASIC-2.36□□□□□ -2.79
RPL39P62891 MIR9-2-201ENST00000384838 87 ntBASIC-2.36□□□□□ -2.79
RPL39P62891 MIR19A-201ENST00000384878 82 ntBASIC-2.36□□□□□ -2.79
RPL39P62891 U8.15-201ENST00000390947 134 ntBASIC-2.36□□□□□ -2.79
RPL39P62891 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC-2.36□□□□□ -2.79
RPL39P62891 AC005002.2-201ENST00000438228 269 ntBASIC-2.36□□□□□ -2.79
RPL39P62891 AC244505.6-201ENST00000452829 130 ntBASIC-2.36□□□□□ -2.79
RPL39P62891 Y_RNA.654-201ENST00000497848 106 ntBASIC-2.36□□□□□ -2.79
RPL39P62891 RNU7-43P-201ENST00000516554 64 ntBASIC-2.36□□□□□ -2.79
RPL39P62891 RNU6-1069P-201ENST00000516612 133 ntBASIC-2.36□□□□□ -2.79
RPL39P62891 AP001189.2-201ENST00000527320 189 ntBASIC-2.36□□□□□ -2.79
RPL39P62891 MIR4441-201ENST00000582623 100 ntBASIC-2.36□□□□□ -2.79
RPL39P62891 BNIP3P24-201ENST00000593398 557 ntBASIC-2.36□□□□□ -2.79
RPL39P62891 AL008636.1-201ENST00000625038 1018 ntBASIC-2.36□□□□□ -2.79
RPL39P62891 Y_RNA.37-201ENST00000362606 108 ntBASIC-2.37□□□□□ -2.79
RPL39P62891 PCNPP5-201ENST00000452246 481 ntBASIC-2.37□□□□□ -2.79
RPL39P62891 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC-2.37□□□□□ -2.79
RPL39P62891 AC011374.2-201ENST00000607135 526 ntBASIC-2.37□□□□□ -2.79
RPL39P62891 MIR1246-201ENST00000636535 73 ntBASIC-2.37□□□□□ -2.79
RPL39P62891 AC006927.4-201ENST00000639187 543 ntBASIC-2.37□□□□□ -2.79
RPL39P62891 SNORD14.1-201ENST00000365609 90 ntBASIC-2.38□□□□□ -2.79
RPL39P62891 RNU6-166P-201ENST00000384371 107 ntBASIC-2.38□□□□□ -2.79
RPL39P62891 SNORD116-20-201ENST00000384529 92 ntBASIC-2.38□□□□□ -2.79
RPL39P62891 AL353572.1-201ENST00000442490 417 ntBASIC-2.38□□□□□ -2.79
RPL39P62891 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-2.38□□□□□ -2.79
RPL39P62891 AC010205.1-201ENST00000616668 449 ntBASIC-2.38□□□□□ -2.79
RPL39P62891 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC-2.38□□□□□ -2.79
RPL39P62891 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC-2.39□□□□□ -2.79
RPL39P62891 Y_RNA.25-201ENST00000362528 102 ntBASIC-2.39□□□□□ -2.79
RPL39P62891 MTCYBP2-201ENST00000407745 171 ntBASIC-2.39□□□□□ -2.79
RPL39P62891 AC098592.1-201ENST00000419352 333 ntBASIC-2.39□□□□□ -2.79
RPL39P62891 USP9YP21-201ENST00000420603 432 ntBASIC-2.39□□□□□ -2.79
RPL39P62891 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC-2.39□□□□□ -2.79
RPL39P62891 MTND3P4-201ENST00000453537 303 ntBASIC-2.39□□□□□ -2.79
RPL39P62891 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-2.39□□□□□ -2.79
RPL39P62891 RNU7-94P-201ENST00000459576 63 ntBASIC-2.39□□□□□ -2.79
RPL39P62891 RPL17P51-201ENST00000605218 238 ntBASIC-2.39□□□□□ -2.79
RPL39P62891 AL139022.2-201ENST00000606934 443 ntBASIC-2.39□□□□□ -2.79
RPL39P62891 Y_RNA.12-201ENST00000362393 112 ntBASIC-2.4□□□□□ -2.79
RPL39P62891 RNU6-901P-201ENST00000384593 106 ntBASIC-2.4□□□□□ -2.79
RPL39P62891 RNA5SP475-201ENST00000410568 110 ntBASIC-2.4□□□□□ -2.79
RPL39P62891 AC114491.1-201ENST00000416095 246 ntBASIC-2.4□□□□□ -2.79
RPL39P62891 ZNF736P7Y-201ENST00000425158 820 ntBASIC-2.4□□□□□ -2.79
RPL39P62891 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC-2.4□□□□□ -2.79
RPL39P62891 AC022447.4-201ENST00000504053 364 ntBASIC-2.4□□□□□ -2.79
RPL39P62891 AC010486.3-201ENST00000511602 785 ntBASIC-2.4□□□□□ -2.79
RPL39P62891 RNU6-475P-201ENST00000516073 104 ntBASIC-2.4□□□□□ -2.79
RPL39P62891 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC-2.4□□□□□ -2.79
RPL39P62891 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC-2.4□□□□□ -2.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms