Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 AC080013.3-201ENST00000606839 578 ntBASIC-0.55□□□□□ -2.5
RPS28P62857 MIR8087-201ENST00000612745 78 ntBASIC-0.55□□□□□ -2.5
RPS28P62857 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.55□□□□□ -2.5
RPS28P62857 AC098679.4-201ENST00000624241 654 ntBASIC-0.55□□□□□ -2.5
RPS28P62857 MTND4P4-201ENST00000439033 1366 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 SNORA18.1-201ENST00000363418 128 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 SNORD114-28-201ENST00000363610 72 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 RNU6-266P-201ENST00000364225 107 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 SNORD114-12-201ENST00000365400 75 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 Y_RNA.376-201ENST00000365638 108 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 RNU6-533P-201ENST00000384144 107 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 MIR196A2-201ENST00000385189 110 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 AC243428.1-201ENST00000421099 264 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 Z99497.1-201ENST00000421282 135 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 RPS27AP14-201ENST00000422868 454 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-0.56□□□□□ -2.5
RPS28P62857 AC092989.1-201ENST00000481235 277 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC-0.56□□□□□ -2.5
RPS28P62857 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 SNORA18.7-201ENST00000516910 131 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 SNORA25.17-201ENST00000517184 124 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 AP003181.2-201ENST00000528941 181 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 MIR4771-2-201ENST00000577758 74 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 MIR4771-1-201ENST00000582617 74 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 MIR4645-201ENST00000583158 77 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 MIR8070-201ENST00000616510 88 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 MIR548AZ-201ENST00000616567 95 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 AC137590.2-201ENST00000619709 240 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 AC027279.3-201ENST00000625055 122 ntBASIC-0.56□□□□□ -2.5
RPS28P62857 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC-0.56□□□□□ -2.5
RPS28P62857 SNORD114-31-201ENST00000363219 75 ntBASIC-0.57□□□□□ -2.5
RPS28P62857 Y_RNA.302-201ENST00000364997 102 ntBASIC-0.57□□□□□ -2.5
RPS28P62857 MIR136-201ENST00000385207 82 ntBASIC-0.57□□□□□ -2.5
RPS28P62857 SNORD115.1-201ENST00000391109 76 ntBASIC-0.57□□□□□ -2.5
RPS28P62857 RNU4-46P-201ENST00000410818 138 ntBASIC-0.57□□□□□ -2.5
RPS28P62857 MTCO3P19-201ENST00000415864 321 ntBASIC-0.57□□□□□ -2.5
RPS28P62857 RNU7-56P-201ENST00000458744 62 ntBASIC-0.57□□□□□ -2.5
RPS28P62857 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.57□□□□□ -2.5
RPS28P62857 RNA5SP436-201ENST00000516020 115 ntBASIC-0.57□□□□□ -2.5
RPS28P62857 RNU6-276P-201ENST00000516114 96 ntBASIC-0.57□□□□□ -2.5
RPS28P62857 MIR4804-201ENST00000581683 73 ntBASIC-0.57□□□□□ -2.5
RPS28P62857 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC-0.57□□□□□ -2.5
RPS28P62857 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC-0.57□□□□□ -2.5
RPS28P62857 AC011921.3-201ENST00000605540 361 ntBASIC-0.57□□□□□ -2.5
RPS28P62857 MIR98-201ENST00000606724 119 ntBASIC-0.57□□□□□ -2.5
RPS28P62857 AC139792.3-201ENST00000623525 224 ntBASIC-0.57□□□□□ -2.5
RPS28P62857 AC006435.5-201ENST00000624486 112 ntBASIC-0.57□□□□□ -2.5
RPS28P62857 MIR4251-201ENST00000635819 61 ntBASIC-0.57□□□□□ -2.5
RPS28P62857 RNU6-227P-201ENST00000362865 103 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 RNU6-934P-201ENST00000365154 107 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 SNORA32.3-201ENST00000384772 121 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 RNU6ATAC15P-201ENST00000408279 121 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 MIR1298-201ENST00000408783 112 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 MIR1197-201ENST00000408818 88 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 MIR1302-7-201ENST00000408841 72 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 AL358176.2-201ENST00000425769 204 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 BTBD7P2-201ENST00000441962 620 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.58□□□□□ -2.5
RPS28P62857 RNU7-165P-201ENST00000458864 60 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 RNU7-182P-201ENST00000459009 62 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 RNU7-159P-201ENST00000459284 62 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 AC091133.4-201ENST00000511142 308 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 RNU6-612P-201ENST00000516909 102 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 AC010376.1-201ENST00000522101 334 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 MTND2P38-201ENST00000522536 667 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC-0.58□□□□□ -2.5
RPS28P62857 FTX_2.1-201ENST00000618816 94 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 MIR6515-201ENST00000619843 57 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 uc_338.36-201ENST00000622331 158 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 AL049777.1-201ENST00000622740 518 ntBASIC-0.58□□□□□ -2.5
RPS28P62857 MTND5P17-201ENST00000418405 1603 ntBASIC-0.59□□□□□ -2.5
RPS28P62857 RNU6-716P-201ENST00000365621 103 ntBASIC-0.59□□□□□ -2.5
RPS28P62857 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.59□□□□□ -2.5
RPS28P62857 RNU6-434P-201ENST00000384376 107 ntBASIC-0.59□□□□□ -2.5
RPS28P62857 RNU6-393P-201ENST00000384475 107 ntBASIC-0.59□□□□□ -2.5
RPS28P62857 MIR598-201ENST00000384868 97 ntBASIC-0.59□□□□□ -2.5
RPS28P62857 RNA5SP300-201ENST00000391197 107 ntBASIC-0.59□□□□□ -2.5
RPS28P62857 MIR892B-201ENST00000401279 77 ntBASIC-0.59□□□□□ -2.5
RPS28P62857 AL355143.1-201ENST00000407101 841 ntBASIC-0.59□□□□□ -2.5
RPS28P62857 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-0.59□□□□□ -2.5
RPS28P62857 AC015818.7-201ENST00000428754 109 ntBASIC-0.59□□□□□ -2.5
RPS28P62857 AC087499.7-201ENST00000441958 109 ntBASIC-0.59□□□□□ -2.5
RPS28P62857 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC-0.59□□□□□ -2.5
RPS28P62857 EPS15P1-201ENST00000448836 336 ntBASIC-0.59□□□□□ -2.5
RPS28P62857 IGLVI-20-201ENST00000519296 130 ntBASIC-0.59□□□□□ -2.5
RPS28P62857 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC-0.59□□□□□ -2.5
RPS28P62857 MIR1273G-201ENST00000577677 100 ntBASIC-0.59□□□□□ -2.5
RPS28P62857 RN7SL793P-201ENST00000583259 296 ntBASIC-0.59□□□□□ -2.5
RPS28P62857 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC-0.59□□□□□ -2.5
RPS28P62857 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.59□□□□□ -2.5
RPS28P62857 RNU4-41P-201ENST00000364426 143 ntBASIC-0.6□□□□□ -2.51
RPS28P62857 RNU6-923P-201ENST00000364753 107 ntBASIC-0.6□□□□□ -2.51
RPS28P62857 SNORD87-201ENST00000364849 89 ntBASIC-0.6□□□□□ -2.51
RPS28P62857 RNY1P4-201ENST00000384595 115 ntBASIC-0.6□□□□□ -2.51
RPS28P62857 RNU6-376P-201ENST00000384731 106 ntBASIC-0.6□□□□□ -2.51
RPS28P62857 MIR329-2-201ENST00000385029 84 ntBASIC-0.6□□□□□ -2.51
RPS28P62857 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.6□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms