Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC006435.5-201ENST00000624486 112 ntBASIC-0.69□□□□□ -2.52
CKS1BP61024 RNU6-137P-201ENST00000363680 108 ntBASIC-0.7□□□□□ -2.52
CKS1BP61024 RNU6-116P-201ENST00000384042 109 ntBASIC-0.7□□□□□ -2.52
CKS1BP61024 RNU6-925P-201ENST00000384629 104 ntBASIC-0.7□□□□□ -2.52
CKS1BP61024 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.7□□□□□ -2.52
CKS1BP61024 MIR15B-201ENST00000385045 98 ntBASIC-0.7□□□□□ -2.52
CKS1BP61024 RNU6-269P-201ENST00000391077 97 ntBASIC-0.7□□□□□ -2.52
CKS1BP61024 MIR548H2-201ENST00000408874 88 ntBASIC-0.7□□□□□ -2.52
CKS1BP61024 HMGN2P22-201ENST00000427588 175 ntBASIC-0.7□□□□□ -2.52
CKS1BP61024 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC-0.7□□□□□ -2.52
CKS1BP61024 XIRP2-AS1-201ENST00000525330 776 ntTSL 3 BASIC-0.7□□□□□ -2.52
CKS1BP61024 AC120024.3-201ENST00000603167 156 ntBASIC-0.7□□□□□ -2.52
CKS1BP61024 UGP2-231ENST00000627474 264 ntTSL 5 BASIC-0.7□□□□□ -2.52
CKS1BP61024 Y_RNA.480-201ENST00000384364 102 ntBASIC-0.71□□□□□ -2.52
CKS1BP61024 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.71□□□□□ -2.52
CKS1BP61024 RNU6ATAC25P-201ENST00000408798 117 ntBASIC-0.71□□□□□ -2.52
CKS1BP61024 RPL22P17-201ENST00000438729 315 ntBASIC-0.71□□□□□ -2.52
CKS1BP61024 AC079140.5-201ENST00000507882 310 ntBASIC-0.71□□□□□ -2.52
CKS1BP61024 RNU6-848P-201ENST00000515948 107 ntBASIC-0.71□□□□□ -2.52
CKS1BP61024 RNU6-617P-201ENST00000516147 107 ntBASIC-0.71□□□□□ -2.52
CKS1BP61024 RNU6-473P-201ENST00000516164 107 ntBASIC-0.71□□□□□ -2.52
CKS1BP61024 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.71□□□□□ -2.52
CKS1BP61024 RNA5SP480-201ENST00000516840 109 ntBASIC-0.71□□□□□ -2.52
CKS1BP61024 RNU6-1116P-201ENST00000517269 99 ntBASIC-0.71□□□□□ -2.52
CKS1BP61024 AC023442.1-201ENST00000531247 422 ntBASIC-0.71□□□□□ -2.52
CKS1BP61024 AL592221.1-201ENST00000605266 382 ntBASIC-0.71□□□□□ -2.52
CKS1BP61024 AC240442.1-201ENST00000616055 283 ntBASIC-0.71□□□□□ -2.52
CKS1BP61024 AC104260.1-201ENST00000616660 539 ntBASIC-0.71□□□□□ -2.52
CKS1BP61024 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.72□□□□□ -2.52
CKS1BP61024 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC-0.72□□□□□ -2.52
CKS1BP61024 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.72□□□□□ -2.52
CKS1BP61024 RNU4-1-201ENST00000363925 141 ntBASIC-0.72□□□□□ -2.52
CKS1BP61024 RNU6-715P-201ENST00000365204 103 ntBASIC-0.72□□□□□ -2.52
CKS1BP61024 SNORA32.3-201ENST00000384772 121 ntBASIC-0.72□□□□□ -2.52
CKS1BP61024 MTND4LP11-201ENST00000422184 280 ntBASIC-0.72□□□□□ -2.52
CKS1BP61024 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC-0.72□□□□□ -2.52
CKS1BP61024 AC119618.1-201ENST00000434191 222 ntBASIC-0.72□□□□□ -2.52
CKS1BP61024 AC005042.3-201ENST00000453230 174 ntBASIC-0.72□□□□□ -2.52
CKS1BP61024 RPL17P19-201ENST00000489069 552 ntBASIC-0.72□□□□□ -2.52
CKS1BP61024 RNA5SP285-201ENST00000516619 119 ntBASIC-0.72□□□□□ -2.52
CKS1BP61024 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC-0.72□□□□□ -2.52
CKS1BP61024 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC-0.72□□□□□ -2.52
CKS1BP61024 AC091178.2-201ENST00000584401 117 ntBASIC-0.72□□□□□ -2.52
CKS1BP61024 AL512427.1-201ENST00000618593 349 ntBASIC-0.72□□□□□ -2.52
CKS1BP61024 MIR377-201ENST00000362145 69 ntBASIC-0.73□□□□□ -2.53
CKS1BP61024 Y_RNA.267-201ENST00000364679 109 ntBASIC-0.73□□□□□ -2.53
CKS1BP61024 RNU6-934P-201ENST00000365154 107 ntBASIC-0.73□□□□□ -2.53
CKS1BP61024 SNORD14C-201ENST00000365382 88 ntBASIC-0.73□□□□□ -2.53
CKS1BP61024 AL355143.1-201ENST00000407101 841 ntBASIC-0.73□□□□□ -2.53
CKS1BP61024 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC-0.73□□□□□ -2.53
CKS1BP61024 RPS29P27-201ENST00000463711 170 ntBASIC-0.73□□□□□ -2.53
CKS1BP61024 AC091021.1-201ENST00000468051 388 ntBASIC-0.73□□□□□ -2.53
CKS1BP61024 RPL21P9-201ENST00000556149 474 ntBASIC-0.73□□□□□ -2.53
CKS1BP61024 MTATP6P25-201ENST00000574491 261 ntBASIC-0.73□□□□□ -2.53
CKS1BP61024 SNORD11B-201ENST00000607707 90 ntBASIC-0.73□□□□□ -2.53
CKS1BP61024 AC006157.1-201ENST00000611750 366 ntBASIC-0.73□□□□□ -2.53
CKS1BP61024 MIR548AZ-201ENST00000616567 95 ntBASIC-0.73□□□□□ -2.53
CKS1BP61024 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.73□□□□□ -2.53
CKS1BP61024 Y_RNA.22-201ENST00000362492 102 ntBASIC-0.74□□□□□ -2.53
CKS1BP61024 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.74□□□□□ -2.53
CKS1BP61024 RNU6-580P-201ENST00000365159 107 ntBASIC-0.74□□□□□ -2.53
CKS1BP61024 Y_RNA.465-201ENST00000384293 102 ntBASIC-0.74□□□□□ -2.53
CKS1BP61024 SNORA8.3-201ENST00000384679 139 ntBASIC-0.74□□□□□ -2.53
CKS1BP61024 AL136310.1-201ENST00000404926 654 ntBASIC-0.74□□□□□ -2.53
CKS1BP61024 RNA5SP494-201ENST00000410653 129 ntBASIC-0.74□□□□□ -2.53
CKS1BP61024 MTCO3P19-201ENST00000415864 321 ntBASIC-0.74□□□□□ -2.53
CKS1BP61024 AC114811.1-201ENST00000507207 168 ntBASIC-0.74□□□□□ -2.53
CKS1BP61024 AC097462.1-201ENST00000514125 324 ntBASIC-0.74□□□□□ -2.53
CKS1BP61024 RNU7-129P-201ENST00000516128 62 ntBASIC-0.74□□□□□ -2.53
CKS1BP61024 RNU6-1178P-201ENST00000516674 107 ntBASIC-0.74□□□□□ -2.53
CKS1BP61024 AL121895.2-201ENST00000619558 447 ntBASIC-0.74□□□□□ -2.53
CKS1BP61024 AC139792.3-201ENST00000623525 224 ntBASIC-0.74□□□□□ -2.53
CKS1BP61024 AC098679.4-201ENST00000624241 654 ntBASIC-0.74□□□□□ -2.53
CKS1BP61024 RNA5SP257-201ENST00000363023 116 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 MIR136-201ENST00000385207 82 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 ERHP2-201ENST00000402323 299 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 MIR1298-201ENST00000408783 112 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 AC243428.1-201ENST00000421099 264 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 Z98949.2-201ENST00000440996 144 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 RNU7-165P-201ENST00000458864 60 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 RNU7-182P-201ENST00000459009 62 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 SNORD126-201ENST00000459475 77 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 HIF1AP1-201ENST00000553642 175 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 MIR4771-2-201ENST00000577758 74 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 MIR4771-1-201ENST00000582617 74 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 AP001180.6-201ENST00000584918 159 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 uc_338.36-201ENST00000622331 158 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 SCARNA4-201ENST00000629045 128 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 MIR4251-201ENST00000635819 61 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 MIR6759-201ENST00000638110 65 ntBASIC-0.75□□□□□ -2.53
CKS1BP61024 SNORA36.1-201ENST00000363424 132 ntBASIC-0.76□□□□□ -2.53
CKS1BP61024 SNORD115-7-201ENST00000365306 82 ntBASIC-0.76□□□□□ -2.53
CKS1BP61024 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC-0.76□□□□□ -2.53
CKS1BP61024 snoU13.21-201ENST00000459368 105 ntBASIC-0.76□□□□□ -2.53
CKS1BP61024 MTCO2P6-201ENST00000463134 685 ntBASIC-0.76□□□□□ -2.53
CKS1BP61024 AC010587.1-201ENST00000505809 469 ntBASIC-0.76□□□□□ -2.53
CKS1BP61024 AC005178.1-201ENST00000508392 440 ntBASIC-0.76□□□□□ -2.53
CKS1BP61024 RNU6-782P-201ENST00000516852 104 ntBASIC-0.76□□□□□ -2.53
CKS1BP61024 AC090897.1-201ENST00000580909 226 ntBASIC-0.76□□□□□ -2.53
CKS1BP61024 MIR4676-201ENST00000583078 72 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms