Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RNU6-1335P-201ENST00000365426 107 ntBASIC0.41□□□□□ -2.34
ACTBP60709 Y_RNA.466-201ENST00000384294 113 ntBASIC0.41□□□□□ -2.34
ACTBP60709 MT-TH-201ENST00000387441 69 ntBASIC0.41□□□□□ -2.34
ACTBP60709 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC0.41□□□□□ -2.34
ACTBP60709 AL359672.1-201ENST00000442302 409 ntBASIC0.41□□□□□ -2.34
ACTBP60709 MRPS10P1-201ENST00000448483 130 ntBASIC0.41□□□□□ -2.34
ACTBP60709 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.41□□□□□ -2.34
ACTBP60709 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.41□□□□□ -2.34
ACTBP60709 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.41□□□□□ -2.34
ACTBP60709 Y_RNA.670-201ENST00000516255 105 ntBASIC0.41□□□□□ -2.34
ACTBP60709 RNU6-229P-201ENST00000516614 102 ntBASIC0.41□□□□□ -2.34
ACTBP60709 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.41□□□□□ -2.34
ACTBP60709 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.41□□□□□ -2.34
ACTBP60709 MIR5692C1-201ENST00000585309 91 ntBASIC0.41□□□□□ -2.34
ACTBP60709 AC011712.1-201ENST00000588959 234 ntBASIC0.41□□□□□ -2.34
ACTBP60709 AC243829.3-201ENST00000622177 108 ntBASIC0.41□□□□□ -2.34
ACTBP60709 AC006435.5-201ENST00000624486 112 ntBASIC0.41□□□□□ -2.34
ACTBP60709 SNORD115-32-201ENST00000364079 82 ntBASIC0.4□□□□□ -2.35
ACTBP60709 SNORD87-201ENST00000364849 89 ntBASIC0.4□□□□□ -2.35
ACTBP60709 AL606923.1-201ENST00000406616 190 ntBASIC0.4□□□□□ -2.35
ACTBP60709 AL663109.1-201ENST00000411498 844 ntBASIC0.4□□□□□ -2.35
ACTBP60709 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC0.4□□□□□ -2.35
ACTBP60709 AL358934.1-201ENST00000432346 324 ntBASIC0.4□□□□□ -2.35
ACTBP60709 TPTE2P5-203ENST00000458118 728 ntBASIC0.4□□□□□ -2.35
ACTBP60709 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC0.4□□□□□ -2.35
ACTBP60709 AC022868.1-201ENST00000517767 391 ntBASIC0.4□□□□□ -2.35
ACTBP60709 AC027419.1-201ENST00000522976 328 ntBASIC0.4□□□□□ -2.35
ACTBP60709 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.4□□□□□ -2.35
ACTBP60709 RN7SL793P-201ENST00000583259 296 ntBASIC0.4□□□□□ -2.35
ACTBP60709 MIR4438-201ENST00000585271 93 ntBASIC0.4□□□□□ -2.35
ACTBP60709 AC004223.2-201ENST00000590309 544 ntBASIC0.4□□□□□ -2.35
ACTBP60709 AC007494.3-201ENST00000624660 743 ntBASIC0.4□□□□□ -2.35
ACTBP60709 MIRLET7C-201ENST00000362160 84 ntBASIC0.39□□□□□ -2.35
ACTBP60709 RNU6-1266P-201ENST00000362794 105 ntBASIC0.39□□□□□ -2.35
ACTBP60709 RNU6-137P-201ENST00000363680 108 ntBASIC0.39□□□□□ -2.35
ACTBP60709 RNU6-1103P-201ENST00000384150 107 ntBASIC0.39□□□□□ -2.35
ACTBP60709 RNU6-163P-201ENST00000384396 106 ntBASIC0.39□□□□□ -2.35
ACTBP60709 RNY1P4-201ENST00000384595 115 ntBASIC0.39□□□□□ -2.35
ACTBP60709 RNY3P9-201ENST00000384727 106 ntBASIC0.39□□□□□ -2.35
ACTBP60709 RNU6-1158P-201ENST00000391167 107 ntBASIC0.39□□□□□ -2.35
ACTBP60709 SNORA26.8-201ENST00000391306 124 ntBASIC0.39□□□□□ -2.35
ACTBP60709 MTCO1P20-201ENST00000425366 358 ntBASIC0.39□□□□□ -2.35
ACTBP60709 AC079354.2-201ENST00000453523 154 ntBASIC0.39□□□□□ -2.35
ACTBP60709 AC233266.1-201ENST00000454518 96 ntBASIC0.39□□□□□ -2.35
ACTBP60709 LINC01399-202ENST00000458450 244 ntBASIC0.39□□□□□ -2.35
ACTBP60709 MTCO1P29-201ENST00000496868 288 ntBASIC0.39□□□□□ -2.35
ACTBP60709 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC0.39□□□□□ -2.35
ACTBP60709 RNU7-28P-201ENST00000516759 62 ntBASIC0.39□□□□□ -2.35
ACTBP60709 AP003716.2-201ENST00000528260 108 ntBASIC0.39□□□□□ -2.35
ACTBP60709 AL118558.2-201ENST00000556294 238 ntBASIC0.39□□□□□ -2.35
ACTBP60709 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC0.39□□□□□ -2.35
ACTBP60709 AC100830.2-201ENST00000581636 240 ntBASIC0.39□□□□□ -2.35
ACTBP60709 AC242852.1-201ENST00000612151 96 ntBASIC0.39□□□□□ -2.35
ACTBP60709 AL050303.3-201ENST00000613704 284 ntBASIC0.39□□□□□ -2.35
ACTBP60709 AC007742.2-201ENST00000618226 398 ntBASIC0.39□□□□□ -2.35
ACTBP60709 MIR6079-201ENST00000635807 62 ntBASIC0.39□□□□□ -2.35
ACTBP60709 MTND4P12-201ENST00000498999 1377 ntBASIC0.39□□□□□ -2.35
ACTBP60709 SNORD50.1-201ENST00000362987 71 ntBASIC0.38□□□□□ -2.35
ACTBP60709 RNA5SP499-201ENST00000363982 119 ntBASIC0.38□□□□□ -2.35
ACTBP60709 Y_RNA.393-201ENST00000383936 102 ntBASIC0.38□□□□□ -2.35
ACTBP60709 RNU5A-6P-201ENST00000384136 116 ntBASIC0.38□□□□□ -2.35
ACTBP60709 AC114737.2-201ENST00000421583 173 ntBASIC0.38□□□□□ -2.35
ACTBP60709 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.38□□□□□ -2.35
ACTBP60709 MTCO2P19-201ENST00000427513 598 ntBASIC0.38□□□□□ -2.35
ACTBP60709 AC092628.1-201ENST00000436250 252 ntBASIC0.38□□□□□ -2.35
ACTBP60709 AC093850.1-201ENST00000454121 251 ntBASIC0.38□□□□□ -2.35
ACTBP60709 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.38□□□□□ -2.35
ACTBP60709 SNORD65B-201ENST00000459126 73 ntBASIC0.38□□□□□ -2.35
ACTBP60709 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC0.38□□□□□ -2.35
ACTBP60709 SNORD111.1-201ENST00000516421 86 ntBASIC0.38□□□□□ -2.35
ACTBP60709 RNU6-58P-201ENST00000517143 103 ntBASIC0.38□□□□□ -2.35
ACTBP60709 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.38□□□□□ -2.35
ACTBP60709 AL117336.2-201ENST00000602435 335 ntBASIC0.38□□□□□ -2.35
ACTBP60709 Z94722.1-201ENST00000604328 474 ntBASIC0.38□□□□□ -2.35
ACTBP60709 AL133215.3-201ENST00000609801 448 ntBASIC0.38□□□□□ -2.35
ACTBP60709 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
ACTBP60709 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.38□□□□□ -2.35
ACTBP60709 SNORD114-23-201ENST00000363536 72 ntBASIC0.37□□□□□ -2.35
ACTBP60709 Y_RNA.167-201ENST00000363735 109 ntBASIC0.37□□□□□ -2.35
ACTBP60709 MIR936-201ENST00000401264 98 ntBASIC0.37□□□□□ -2.35
ACTBP60709 AC244023.1-201ENST00000426884 112 ntBASIC0.37□□□□□ -2.35
ACTBP60709 MTCO2P16-201ENST00000436962 677 ntBASIC0.37□□□□□ -2.35
ACTBP60709 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.37□□□□□ -2.35
ACTBP60709 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.37□□□□□ -2.35
ACTBP60709 U7.7-201ENST00000459276 60 ntBASIC0.37□□□□□ -2.35
ACTBP60709 AC097462.1-201ENST00000514125 324 ntBASIC0.37□□□□□ -2.35
ACTBP60709 MTND4LP26-201ENST00000518144 282 ntBASIC0.37□□□□□ -2.35
ACTBP60709 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.37□□□□□ -2.35
ACTBP60709 AC027288.2-201ENST00000553028 243 ntBASIC0.37□□□□□ -2.35
ACTBP60709 AC025627.3-201ENST00000582078 182 ntBASIC0.37□□□□□ -2.35
ACTBP60709 AC091178.2-201ENST00000584401 117 ntBASIC0.37□□□□□ -2.35
ACTBP60709 AC092747.3-201ENST00000603769 301 ntBASIC0.37□□□□□ -2.35
ACTBP60709 AC242498.1-201ENST00000604134 111 ntBASIC0.37□□□□□ -2.35
ACTBP60709 AL357078.3-201ENST00000607528 618 ntBASIC0.37□□□□□ -2.35
ACTBP60709 AL354950.2-201ENST00000617939 290 ntBASIC0.37□□□□□ -2.35
ACTBP60709 AC243994.1-201ENST00000618627 109 ntBASIC0.37□□□□□ -2.35
ACTBP60709 AL158209.2-201ENST00000619266 216 ntBASIC0.37□□□□□ -2.35
ACTBP60709 Y_RNA.265-201ENST00000364677 108 ntBASIC0.36□□□□□ -2.35
ACTBP60709 RNU6-945P-201ENST00000383947 107 ntBASIC0.36□□□□□ -2.35
ACTBP60709 Y_RNA.415-201ENST00000384012 112 ntBASIC0.36□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 173.5 ms