Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.61□□□□□ -2.15
PEX3P56589 Y_RNA.675-201ENST00000516389 149 ntBASIC1.61□□□□□ -2.15
PEX3P56589 RNU1-117P-201ENST00000517041 158 ntBASIC1.61□□□□□ -2.15
PEX3P56589 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC1.61□□□□□ -2.15
PEX3P56589 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.61□□□□□ -2.15
PEX3P56589 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC1.61□□□□□ -2.15
PEX3P56589 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.61□□□□□ -2.15
PEX3P56589 AC010900.2-201ENST00000604508 210 ntBASIC1.61□□□□□ -2.15
PEX3P56589 AL773524.1-201ENST00000614065 229 ntBASIC1.61□□□□□ -2.15
PEX3P56589 AL357075.2-201ENST00000614906 189 ntBASIC1.61□□□□□ -2.15
PEX3P56589 Y_RNA.804-201ENST00000615262 101 ntBASIC1.61□□□□□ -2.15
PEX3P56589 AC138305.3-201ENST00000624988 240 ntBASIC1.61□□□□□ -2.15
PEX3P56589 snoZ196.1-201ENST00000625269 89 ntBASIC1.61□□□□□ -2.15
PEX3P56589 AL159152.1-201ENST00000635019 2587 ntBASIC1.61□□□□□ -2.15
PEX3P56589 MTND5P35-201ENST00000557537 1720 ntBASIC1.6□□□□□ -2.15
PEX3P56589 RNU4-79P-201ENST00000362764 141 ntBASIC1.6□□□□□ -2.15
PEX3P56589 RNU6-727P-201ENST00000363592 107 ntBASIC1.6□□□□□ -2.15
PEX3P56589 Y_RNA.259-201ENST00000364619 101 ntBASIC1.6□□□□□ -2.15
PEX3P56589 Y_RNA.384-201ENST00000383909 102 ntBASIC1.6□□□□□ -2.15
PEX3P56589 AL033519.2-201ENST00000403958 392 ntBASIC1.6□□□□□ -2.15
PEX3P56589 MIR1185-2-201ENST00000408687 86 ntBASIC1.6□□□□□ -2.15
PEX3P56589 AC244636.1-201ENST00000421152 228 ntBASIC1.6□□□□□ -2.15
PEX3P56589 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC1.6□□□□□ -2.15
PEX3P56589 AC092423.1-201ENST00000430165 186 ntBASIC1.6□□□□□ -2.15
PEX3P56589 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC1.6□□□□□ -2.15
PEX3P56589 RPL30P15-201ENST00000457129 321 ntBASIC1.6□□□□□ -2.15
PEX3P56589 RNU7-57P-201ENST00000459540 60 ntBASIC1.6□□□□□ -2.15
PEX3P56589 AC011406.1-201ENST00000512440 370 ntBASIC1.6□□□□□ -2.15
PEX3P56589 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC1.6□□□□□ -2.15
PEX3P56589 Y_RNA.683-201ENST00000516508 93 ntBASIC1.6□□□□□ -2.15
PEX3P56589 AC025647.1-201ENST00000517879 253 ntBASIC1.6□□□□□ -2.15
PEX3P56589 SUMO2P18-201ENST00000518873 252 ntBASIC1.6□□□□□ -2.15
PEX3P56589 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC1.6□□□□□ -2.15
PEX3P56589 U1.36-201ENST00000620684 176 ntBASIC1.6□□□□□ -2.15
PEX3P56589 MIR338-201ENST00000636369 67 ntBASIC1.6□□□□□ -2.15
PEX3P56589 RNU6-1301P-201ENST00000362724 104 ntBASIC1.59□□□□□ -2.15
PEX3P56589 Y_RNA.67-201ENST00000362870 100 ntBASIC1.59□□□□□ -2.15
PEX3P56589 Y_RNA.356-201ENST00000365475 113 ntBASIC1.59□□□□□ -2.15
PEX3P56589 Y_RNA.358-201ENST00000365491 99 ntBASIC1.59□□□□□ -2.15
PEX3P56589 Y_RNA.509-201ENST00000384506 99 ntBASIC1.59□□□□□ -2.15
PEX3P56589 RNU6-296P-201ENST00000384608 107 ntBASIC1.59□□□□□ -2.15
PEX3P56589 RNU6-1156P-201ENST00000410365 100 ntBASIC1.59□□□□□ -2.15
PEX3P56589 ELOCP21-201ENST00000412558 336 ntBASIC1.59□□□□□ -2.15
PEX3P56589 AC245047.4-201ENST00000433189 144 ntBASIC1.59□□□□□ -2.15
PEX3P56589 HMGN2P34-201ENST00000437647 269 ntBASIC1.59□□□□□ -2.15
PEX3P56589 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.59□□□□□ -2.15
PEX3P56589 AC027575.1-201ENST00000481064 460 ntBASIC1.59□□□□□ -2.15
PEX3P56589 AC105758.1-201ENST00000506038 399 ntBASIC1.59□□□□□ -2.15
PEX3P56589 RNA5SP458-201ENST00000516188 119 ntBASIC1.59□□□□□ -2.15
PEX3P56589 RN7SKP49-201ENST00000516675 260 ntBASIC1.59□□□□□ -2.15
PEX3P56589 AC091144.1-201ENST00000519573 138 ntBASIC1.59□□□□□ -2.15
PEX3P56589 AC083806.3-201ENST00000614016 455 ntBASIC1.59□□□□□ -2.15
PEX3P56589 AC126177.8-201ENST00000618339 1015 ntBASIC1.59□□□□□ -2.15
PEX3P56589 AP000648.3-201ENST00000623539 4507 ntBASIC1.58□□□□□ -2.16
PEX3P56589 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
PEX3P56589 MIR410-201ENST00000362222 80 ntBASIC1.58□□□□□ -2.16
PEX3P56589 Y_RNA.58-201ENST00000362807 102 ntBASIC1.58□□□□□ -2.16
PEX3P56589 RNU6-490P-201ENST00000362985 107 ntBASIC1.58□□□□□ -2.16
PEX3P56589 RNU6-112P-201ENST00000363599 104 ntBASIC1.58□□□□□ -2.16
PEX3P56589 Y_RNA.154-201ENST00000363624 102 ntBASIC1.58□□□□□ -2.16
PEX3P56589 Y_RNA.187-201ENST00000363918 113 ntBASIC1.58□□□□□ -2.16
PEX3P56589 RNY3P1-201ENST00000365085 102 ntBASIC1.58□□□□□ -2.16
PEX3P56589 RNY3-201ENST00000365484 102 ntBASIC1.58□□□□□ -2.16
PEX3P56589 Y_RNA.463-201ENST00000384271 102 ntBASIC1.58□□□□□ -2.16
PEX3P56589 Y_RNA.496-201ENST00000384444 101 ntBASIC1.58□□□□□ -2.16
PEX3P56589 MT-TD-201ENST00000387419 68 ntBASIC1.58□□□□□ -2.16
PEX3P56589 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PEX3P56589 Y_RNA.592-201ENST00000410274 109 ntBASIC1.58□□□□□ -2.16
PEX3P56589 RN7SKP51-201ENST00000410781 304 ntBASIC1.58□□□□□ -2.16
PEX3P56589 RNU6-57P-201ENST00000411348 103 ntBASIC1.58□□□□□ -2.16
PEX3P56589 BTF3P4-201ENST00000418852 495 ntBASIC1.58□□□□□ -2.16
PEX3P56589 PSPC1-AS2-201ENST00000423023 376 ntTSL 3 BASIC1.58□□□□□ -2.16
PEX3P56589 RPL23AP6-201ENST00000446637 472 ntBASIC1.58□□□□□ -2.16
PEX3P56589 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.58□□□□□ -2.16
PEX3P56589 AC010409.1-201ENST00000487382 476 ntBASIC1.58□□□□□ -2.16
PEX3P56589 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.58□□□□□ -2.16
PEX3P56589 DNAJC19P9-201ENST00000555084 351 ntBASIC1.58□□□□□ -2.16
PEX3P56589 MIR4795-201ENST00000584182 89 ntBASIC1.58□□□□□ -2.16
PEX3P56589 C8orf59P2-201ENST00000603441 271 ntBASIC1.58□□□□□ -2.16
PEX3P56589 AL512598.1-201ENST00000610158 273 ntBASIC1.58□□□□□ -2.16
PEX3P56589 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.58□□□□□ -2.16
PEX3P56589 AC133104.2-201ENST00000615272 193 ntBASIC1.58□□□□□ -2.16
PEX3P56589 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.58□□□□□ -2.16
PEX3P56589 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.58□□□□□ -2.16
PEX3P56589 MTND5P10-201ENST00000603719 1809 ntBASIC1.58□□□□□ -2.16
PEX3P56589 AC073544.1-201ENST00000600110 1595 ntBASIC1.58□□□□□ -2.16
PEX3P56589 RNU6-862P-201ENST00000362804 105 ntBASIC1.57□□□□□ -2.16
PEX3P56589 snoU2-30.2-201ENST00000362805 70 ntBASIC1.57□□□□□ -2.16
PEX3P56589 Y_RNA.287-201ENST00000364853 94 ntBASIC1.57□□□□□ -2.16
PEX3P56589 Y_RNA.315-201ENST00000365117 102 ntBASIC1.57□□□□□ -2.16
PEX3P56589 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.57□□□□□ -2.16
PEX3P56589 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.57□□□□□ -2.16
PEX3P56589 RPL23AP50-201ENST00000434149 455 ntBASIC1.57□□□□□ -2.16
PEX3P56589 SNRPGP13-201ENST00000442212 177 ntBASIC1.57□□□□□ -2.16
PEX3P56589 AC074290.1-201ENST00000448883 135 ntBASIC1.57□□□□□ -2.16
PEX3P56589 CHEK2P4-201ENST00000450340 246 ntBASIC1.57□□□□□ -2.16
PEX3P56589 LINC01032-201ENST00000451690 276 ntTSL 5 BASIC1.57□□□□□ -2.16
PEX3P56589 RNU7-95P-201ENST00000459222 64 ntBASIC1.57□□□□□ -2.16
PEX3P56589 RNU7-87P-201ENST00000459343 62 ntBASIC1.57□□□□□ -2.16
PEX3P56589 RNU6-1041P-201ENST00000516254 102 ntBASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms