Protein–RNA interactions for Protein: P55318

FOXA3, Hepatocyte nuclear factor 3-gamma, humanhuman

Predicted RBP Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA3P55318 HSFY5P-201ENST00000453726 309 ntBASIC-0.06□□□□□ -2.42
FOXA3P55318 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.06□□□□□ -2.42
FOXA3P55318 AC107401.1-201ENST00000503426 685 ntBASIC-0.06□□□□□ -2.42
FOXA3P55318 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.06□□□□□ -2.42
FOXA3P55318 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.06□□□□□ -2.42
FOXA3P55318 MTND1P35-201ENST00000526739 508 ntBASIC-0.06□□□□□ -2.42
FOXA3P55318 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC-0.06□□□□□ -2.42
FOXA3P55318 HIF1AP1-201ENST00000553642 175 ntBASIC-0.06□□□□□ -2.42
FOXA3P55318 RPL21P9-201ENST00000556149 474 ntBASIC-0.06□□□□□ -2.42
FOXA3P55318 MIR3612-201ENST00000579753 87 ntBASIC-0.06□□□□□ -2.42
FOXA3P55318 MIR5583-1-201ENST00000580941 59 ntBASIC-0.06□□□□□ -2.42
FOXA3P55318 MIR4768-201ENST00000585270 74 ntBASIC-0.06□□□□□ -2.42
FOXA3P55318 AC012433.1-201ENST00000588916 398 ntBASIC-0.06□□□□□ -2.42
FOXA3P55318 AC023932.2-201ENST00000603176 175 ntBASIC-0.06□□□□□ -2.42
FOXA3P55318 AC104695.3-201ENST00000604052 296 ntBASIC-0.06□□□□□ -2.42
FOXA3P55318 AL158050.2-201ENST00000605336 568 ntBASIC-0.06□□□□□ -2.42
FOXA3P55318 AC064836.2-201ENST00000609491 462 ntBASIC-0.06□□□□□ -2.42
FOXA3P55318 AC007742.2-201ENST00000618226 398 ntBASIC-0.06□□□□□ -2.42
FOXA3P55318 SNORD114-16-201ENST00000363044 70 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 RNU6-833P-201ENST00000363486 107 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 SNORD114-9-201ENST00000364370 72 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 RNU4-41P-201ENST00000364426 143 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 Y_RNA.415-201ENST00000384012 112 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 MIR598-201ENST00000384868 97 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 MIR516B2-201ENST00000385190 85 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 MIR518E-201ENST00000385252 88 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 Y_RNA.598-201ENST00000410480 95 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 AL008987.1-201ENST00000415528 237 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.07□□□□□ -2.42
FOXA3P55318 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.07□□□□□ -2.42
FOXA3P55318 AL353997.1-201ENST00000432936 108 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 AC112518.1-201ENST00000436089 575 ntTSL 4 BASIC-0.07□□□□□ -2.42
FOXA3P55318 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC-0.07□□□□□ -2.42
FOXA3P55318 ZNF114P1-201ENST00000453500 292 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 ELOCP24-201ENST00000456370 334 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 RNU7-167P-201ENST00000459160 62 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.07□□□□□ -2.42
FOXA3P55318 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC-0.07□□□□□ -2.42
FOXA3P55318 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC-0.07□□□□□ -2.42
FOXA3P55318 MTATP6P9-201ENST00000515039 680 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 SNORA25.14-201ENST00000516481 132 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 RNU6-341P-201ENST00000516973 96 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC-0.07□□□□□ -2.42
FOXA3P55318 AC069113.3-201ENST00000521019 150 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 AC093027.1-201ENST00000546698 429 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC-0.07□□□□□ -2.42
FOXA3P55318 EIF1P4-201ENST00000572664 335 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 FGF7P1-201ENST00000582820 288 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 AC091178.2-201ENST00000584401 117 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 SNORA25.18-201ENST00000607153 114 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 AP000240.1-201ENST00000609910 452 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 U2.17-201ENST00000611454 95 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 MIR4315-1-201ENST00000636800 73 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 MIR371B-201ENST00000638082 66 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 MIR4315-2-201ENST00000640925 73 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 ANKRD30BP1-201ENST00000451052 2186 ntBASIC-0.07□□□□□ -2.42
FOXA3P55318 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
FOXA3P55318 Y_RNA.399-201ENST00000383955 105 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 MIR32-201ENST00000384965 70 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
FOXA3P55318 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
FOXA3P55318 MIR1298-201ENST00000408783 112 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 SNORA40.8-201ENST00000411034 126 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 SNORD71-201ENST00000411292 86 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.08□□□□□ -2.42
FOXA3P55318 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.08□□□□□ -2.42
FOXA3P55318 RNU7-138P-201ENST00000459479 64 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 RPL23AP75-201ENST00000491601 451 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 AC005178.1-201ENST00000508392 440 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 AC097462.1-201ENST00000514125 324 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 RNU6-430P-201ENST00000517078 107 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 AC104576.1-201ENST00000524225 88 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC-0.08□□□□□ -2.42
FOXA3P55318 AP002004.2-201ENST00000531656 154 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 MIR4764-201ENST00000580680 88 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 MIR548AB-201ENST00000584917 84 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 AC087683.2-201ENST00000611384 326 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 AC010999.1-201ENST00000611856 324 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 AC107308.1-201ENST00000615897 301 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 AC104260.1-201ENST00000616660 539 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 uc_338.11-201ENST00000619132 160 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 AC078938.1-201ENST00000620993 318 ntBASIC-0.08□□□□□ -2.42
FOXA3P55318 RNU6-222P-201ENST00000362438 107 ntBASIC-0.09□□□□□ -2.42
FOXA3P55318 RNU6-369P-201ENST00000362515 102 ntBASIC-0.09□□□□□ -2.42
FOXA3P55318 RNU6-108P-201ENST00000365558 107 ntBASIC-0.09□□□□□ -2.42
FOXA3P55318 MIR122-201ENST00000385044 85 ntBASIC-0.09□□□□□ -2.42
FOXA3P55318 AC098592.1-201ENST00000419352 333 ntBASIC-0.09□□□□□ -2.42
FOXA3P55318 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.09□□□□□ -2.42
FOXA3P55318 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC-0.09□□□□□ -2.42
FOXA3P55318 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC-0.09□□□□□ -2.42
FOXA3P55318 MTATP6P14-201ENST00000455189 673 ntBASIC-0.09□□□□□ -2.42
FOXA3P55318 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.09□□□□□ -2.42
FOXA3P55318 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC-0.09□□□□□ -2.42
FOXA3P55318 AC114811.1-201ENST00000507207 168 ntBASIC-0.09□□□□□ -2.42
FOXA3P55318 SNORA18.7-201ENST00000516910 131 ntBASIC-0.09□□□□□ -2.42
FOXA3P55318 SNORA74.3-201ENST00000517108 154 ntBASIC-0.09□□□□□ -2.42
FOXA3P55318 AP003072.2-201ENST00000527756 676 ntBASIC-0.09□□□□□ -2.42
FOXA3P55318 AP003327.1-201ENST00000529684 127 ntBASIC-0.09□□□□□ -2.42
FOXA3P55318 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC-0.09□□□□□ -2.42
FOXA3P55318 MTND4P33-201ENST00000556706 766 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms