Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 MIR151B-201ENST00000584249 96 ntBASIC1.54□□□□□ -2.16
VCPP55072 AP001485.1-201ENST00000604799 199 ntBASIC1.54□□□□□ -2.16
VCPP55072 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.54□□□□□ -2.16
VCPP55072 SNORD11B-201ENST00000607707 90 ntBASIC1.54□□□□□ -2.16
VCPP55072 AC008873.1-201ENST00000625051 138 ntBASIC1.54□□□□□ -2.16
VCPP55072 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
VCPP55072 AL161722.3-201ENST00000605789 2983 ntBASIC1.53□□□□□ -2.16
VCPP55072 Y_RNA.2-201ENST00000362330 96 ntBASIC1.53□□□□□ -2.16
VCPP55072 RNU1-62P-201ENST00000362599 164 ntBASIC1.53□□□□□ -2.16
VCPP55072 RNU6-862P-201ENST00000362804 105 ntBASIC1.53□□□□□ -2.16
VCPP55072 Y_RNA.67-201ENST00000362870 100 ntBASIC1.53□□□□□ -2.16
VCPP55072 Y_RNA.88-201ENST00000363029 99 ntBASIC1.53□□□□□ -2.16
VCPP55072 Y_RNA.184-201ENST00000363884 108 ntBASIC1.53□□□□□ -2.16
VCPP55072 Y_RNA.482-201ENST00000384377 111 ntBASIC1.53□□□□□ -2.16
VCPP55072 RNU6-601P-201ENST00000384540 107 ntBASIC1.53□□□□□ -2.16
VCPP55072 RNA5SP504-201ENST00000410676 117 ntBASIC1.53□□□□□ -2.16
VCPP55072 RPL21P111-201ENST00000418453 477 ntBASIC1.53□□□□□ -2.16
VCPP55072 USMG5P1-201ENST00000425964 177 ntBASIC1.53□□□□□ -2.16
VCPP55072 AC099677.2-201ENST00000436385 175 ntBASIC1.53□□□□□ -2.16
VCPP55072 RNU7-57P-201ENST00000459540 60 ntBASIC1.53□□□□□ -2.16
VCPP55072 MTND4P12-201ENST00000498999 1377 ntBASIC1.53□□□□□ -2.16
VCPP55072 AC025465.3-201ENST00000510570 311 ntBASIC1.53□□□□□ -2.16
VCPP55072 AC011406.1-201ENST00000512440 370 ntBASIC1.53□□□□□ -2.16
VCPP55072 RNA5SP384-201ENST00000516615 116 ntBASIC1.53□□□□□ -2.16
VCPP55072 Y_RNA.708-201ENST00000516950 96 ntBASIC1.53□□□□□ -2.16
VCPP55072 AP003174.2-201ENST00000544663 294 ntTSL 3 BASIC1.53□□□□□ -2.16
VCPP55072 UBL5P4-201ENST00000562584 236 ntBASIC1.53□□□□□ -2.16
VCPP55072 FAM106DP-201ENST00000586416 501 ntBASIC1.53□□□□□ -2.16
VCPP55072 AC080078.3-201ENST00000605407 463 ntBASIC1.53□□□□□ -2.16
VCPP55072 AL078596.1-201ENST00000624856 447 ntBASIC1.53□□□□□ -2.16
VCPP55072 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.52□□□□□ -2.17
VCPP55072 Y_RNA.166-201ENST00000363730 102 ntBASIC1.52□□□□□ -2.17
VCPP55072 RNU6-280P-201ENST00000364145 104 ntBASIC1.52□□□□□ -2.17
VCPP55072 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC1.52□□□□□ -2.17
VCPP55072 snoU13.9-201ENST00000458927 103 ntBASIC1.52□□□□□ -2.17
VCPP55072 AP000870.1-201ENST00000472927 406 ntBASIC1.52□□□□□ -2.17
VCPP55072 Y_RNA.706-201ENST00000516933 99 ntBASIC1.52□□□□□ -2.17
VCPP55072 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.52□□□□□ -2.17
VCPP55072 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.52□□□□□ -2.17
VCPP55072 AL355802.3-201ENST00000607571 545 ntBASIC1.52□□□□□ -2.17
VCPP55072 AC100812.1-201ENST00000607622 580 ntBASIC1.52□□□□□ -2.17
VCPP55072 AC005014.2-201ENST00000607795 599 ntBASIC1.52□□□□□ -2.17
VCPP55072 AC009229.3-201ENST00000608056 282 ntBASIC1.52□□□□□ -2.17
VCPP55072 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.52□□□□□ -2.17
VCPP55072 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.52□□□□□ -2.17
VCPP55072 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.52□□□□□ -2.17
VCPP55072 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.52□□□□□ -2.17
VCPP55072 RNU6-112P-201ENST00000363599 104 ntBASIC1.51□□□□□ -2.17
VCPP55072 RNU5F-3P-201ENST00000363767 117 ntBASIC1.51□□□□□ -2.17
VCPP55072 MIR10B-201ENST00000385011 110 ntBASIC1.51□□□□□ -2.17
VCPP55072 AL117342.1-201ENST00000404861 406 ntBASIC1.51□□□□□ -2.17
VCPP55072 RNU6-57P-201ENST00000411348 103 ntBASIC1.51□□□□□ -2.17
VCPP55072 PDCL2P1-201ENST00000419302 352 ntBASIC1.51□□□□□ -2.17
VCPP55072 MTND3P23-201ENST00000431980 347 ntBASIC1.51□□□□□ -2.17
VCPP55072 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.51□□□□□ -2.17
VCPP55072 MTND3P10-201ENST00000450967 341 ntBASIC1.51□□□□□ -2.17
VCPP55072 AC103851.1-201ENST00000506833 274 ntBASIC1.51□□□□□ -2.17
VCPP55072 RNA5SP436-201ENST00000516020 115 ntBASIC1.51□□□□□ -2.17
VCPP55072 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.51□□□□□ -2.17
VCPP55072 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.51□□□□□ -2.17
VCPP55072 MIR5701-3-201ENST00000578890 82 ntBASIC1.51□□□□□ -2.17
VCPP55072 MIR5701-1-201ENST00000585138 82 ntBASIC1.51□□□□□ -2.17
VCPP55072 AL353149.1-201ENST00000610667 244 ntBASIC1.51□□□□□ -2.17
VCPP55072 MIR5701-2-201ENST00000615634 82 ntBASIC1.51□□□□□ -2.17
VCPP55072 AC022306.2-201ENST00000617563 647 ntBASIC1.51□□□□□ -2.17
VCPP55072 MIR6788-201ENST00000618842 66 ntBASIC1.51□□□□□ -2.17
VCPP55072 AC068205.3-201ENST00000636385 468 ntBASIC1.51□□□□□ -2.17
VCPP55072 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
VCPP55072 RNU1-96P-201ENST00000364163 162 ntBASIC1.5□□□□□ -2.17
VCPP55072 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.5□□□□□ -2.17
VCPP55072 MIR548J-201ENST00000408833 112 ntBASIC1.5□□□□□ -2.17
VCPP55072 RBMX2P4-201ENST00000441256 376 ntBASIC1.5□□□□□ -2.17
VCPP55072 RPS29P23-201ENST00000458635 123 ntBASIC1.5□□□□□ -2.17
VCPP55072 AC091179.3-201ENST00000474761 144 ntBASIC1.5□□□□□ -2.17
VCPP55072 RPL7P42-201ENST00000481005 679 ntBASIC1.5□□□□□ -2.17
VCPP55072 AC116353.2-201ENST00000505332 712 ntBASIC1.5□□□□□ -2.17
VCPP55072 PRDX4P1-201ENST00000507189 574 ntBASIC1.5□□□□□ -2.17
VCPP55072 RNA5SP61-201ENST00000516453 100 ntBASIC1.5□□□□□ -2.17
VCPP55072 Y_RNA.691-201ENST00000516611 103 ntBASIC1.5□□□□□ -2.17
VCPP55072 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.5□□□□□ -2.17
VCPP55072 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.5□□□□□ -2.17
VCPP55072 MIR4422-201ENST00000581938 83 ntBASIC1.5□□□□□ -2.17
VCPP55072 AC005730.3-201ENST00000583067 366 ntBASIC1.5□□□□□ -2.17
VCPP55072 AC069114.2-201ENST00000604699 304 ntBASIC1.5□□□□□ -2.17
VCPP55072 PRR13P7-201ENST00000605538 430 ntBASIC1.5□□□□□ -2.17
VCPP55072 PISRT1.1-201ENST00000616930 107 ntBASIC1.5□□□□□ -2.17
VCPP55072 AC126177.8-201ENST00000618339 1015 ntBASIC1.5□□□□□ -2.17
VCPP55072 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.5□□□□□ -2.17
VCPP55072 snoZ196.1-201ENST00000625269 89 ntBASIC1.5□□□□□ -2.17
VCPP55072 AC099654.5-201ENST00000636479 350 ntBASIC1.5□□□□□ -2.17
VCPP55072 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
VCPP55072 RNY1P16-201ENST00000363063 111 ntBASIC1.49□□□□□ -2.17
VCPP55072 Y_RNA.106-201ENST00000363189 100 ntBASIC1.49□□□□□ -2.17
VCPP55072 RNU6-727P-201ENST00000363592 107 ntBASIC1.49□□□□□ -2.17
VCPP55072 Y_RNA.179-201ENST00000363844 90 ntBASIC1.49□□□□□ -2.17
VCPP55072 SNORD87-201ENST00000364849 89 ntBASIC1.49□□□□□ -2.17
VCPP55072 SNORD81.2-201ENST00000365153 76 ntBASIC1.49□□□□□ -2.17
VCPP55072 Y_RNA.393-201ENST00000383936 102 ntBASIC1.49□□□□□ -2.17
VCPP55072 Y_RNA.404-201ENST00000383978 102 ntBASIC1.49□□□□□ -2.17
VCPP55072 RNU6-793P-201ENST00000384233 104 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms