Protein–RNA interactions for Protein: P53420

COL4A4, Collagen alpha-4(IV) chain, humanhuman

Predicted RBP Predictions only

Length 1,690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4P53420 RNU6-377P-201ENST00000515965 102 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 RNU6-927P-201ENST00000516199 100 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 SNORA25.14-201ENST00000516481 132 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 RNU6-861P-201ENST00000516745 106 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC1.63□□□□□ -2.15
COL4A4P53420 AC090617.3-201ENST00000573670 475 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 AC012493.3-201ENST00000604494 112 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 AC005828.6-201ENST00000606610 232 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 U73479.1-201ENST00000618062 168 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 AL359854.1-201ENST00000614203 1594 ntBASIC1.63□□□□□ -2.15
COL4A4P53420 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
COL4A4P53420 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.62□□□□□ -2.15
COL4A4P53420 DEFB108F-201ENST00000344638 222 ntBASIC1.62□□□□□ -2.15
COL4A4P53420 RNU6-1167P-201ENST00000363227 94 ntBASIC1.62□□□□□ -2.15
COL4A4P53420 SNORD113-8-201ENST00000363497 74 ntBASIC1.62□□□□□ -2.15
COL4A4P53420 RNU6-682P-201ENST00000363843 106 ntBASIC1.62□□□□□ -2.15
COL4A4P53420 RNU6-651P-201ENST00000411040 105 ntBASIC1.62□□□□□ -2.15
COL4A4P53420 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC1.62□□□□□ -2.15
COL4A4P53420 RPL21P66-201ENST00000426566 466 ntBASIC1.62□□□□□ -2.15
COL4A4P53420 MTCO1P5-201ENST00000433573 344 ntBASIC1.62□□□□□ -2.15
COL4A4P53420 SEPT14P8-201ENST00000508026 178 ntBASIC1.62□□□□□ -2.15
COL4A4P53420 RNU6-572P-201ENST00000516724 80 ntBASIC1.62□□□□□ -2.15
COL4A4P53420 AP004607.1-201ENST00000524456 203 ntBASIC1.62□□□□□ -2.15
COL4A4P53420 TRAV28-201ENST00000557548 323 ntBASIC1.62□□□□□ -2.15
COL4A4P53420 MIR4300-201ENST00000581016 96 ntBASIC1.62□□□□□ -2.15
COL4A4P53420 MIR151B-201ENST00000584249 96 ntBASIC1.62□□□□□ -2.15
COL4A4P53420 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.62□□□□□ -2.15
COL4A4P53420 MIR6767-201ENST00000637302 66 ntBASIC1.62□□□□□ -2.15
COL4A4P53420 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
COL4A4P53420 MIR411-201ENST00000362239 96 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNU6-600P-201ENST00000362524 99 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 Y_RNA.68-201ENST00000362881 102 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNU6-512P-201ENST00000364438 103 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 Y_RNA.245-201ENST00000364493 95 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNU6-740P-201ENST00000364734 105 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNU6-81P-201ENST00000365608 104 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 Y_RNA.405-201ENST00000383979 100 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNU6-1181P-201ENST00000384191 106 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 Y_RNA.451-201ENST00000384200 100 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNU6-17P-201ENST00000384245 107 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNU6-18P-201ENST00000384527 107 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 Y_RNA.524-201ENST00000384564 100 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 Y_RNA.561-201ENST00000384694 100 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNU6-493P-201ENST00000391321 108 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 Y_RNA.602-201ENST00000410535 92 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNU5A-5P-201ENST00000411054 116 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 AL591043.1-201ENST00000432461 424 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 AL445305.1-201ENST00000432577 575 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 Y_RNA.662-201ENST00000516028 97 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNA5SP468-201ENST00000516782 93 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 Y_RNA.706-201ENST00000516933 99 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNU6-255P-201ENST00000516957 105 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 SNORA31.24-201ENST00000517232 57 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNU6-840P-201ENST00000517275 65 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A4P53420 AP001485.1-201ENST00000604799 199 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 SNORD113-5-201ENST00000607261 78 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.61□□□□□ -2.15
COL4A4P53420 U6.92-201ENST00000636464 89 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 MAPK10-266ENST00000641066 6555 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 ZNF209P-201ENST00000593450 2304 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNU6-227P-201ENST00000362865 103 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNU6-942P-201ENST00000363002 107 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 SNORD113-1-201ENST00000365321 69 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNU6-837P-201ENST00000391056 108 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RNU6-394P-201ENST00000410735 107 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 Y_RNA.626-201ENST00000411288 95 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.61□□□□□ -2.15
COL4A4P53420 CKS1BP5-201ENST00000434172 273 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A4P53420 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A4P53420 RNU7-87P-201ENST00000459343 62 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 RPL30P1-201ENST00000488676 339 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 AC074198.2-201ENST00000508153 258 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.61□□□□□ -2.15
COL4A4P53420 CR383656.8-201ENST00000549046 145 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.61□□□□□ -2.15
COL4A4P53420 AC021753.1-201ENST00000635724 168 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 U4.7-201ENST00000638126 106 ntBASIC1.61□□□□□ -2.15
COL4A4P53420 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
COL4A4P53420 AC009812.4-201ENST00000569134 1805 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
COL4A4P53420 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.6□□□□□ -2.15
COL4A4P53420 Y_RNA.82-201ENST00000363000 102 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 Y_RNA.92-201ENST00000363043 102 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 RNU6-626P-201ENST00000363354 107 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 Y_RNA.235-201ENST00000364412 102 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 Y_RNA.306-201ENST00000365015 102 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 Y_RNA.308-201ENST00000365043 101 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 Y_RNA.312-201ENST00000365089 102 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 Y_RNA.322-201ENST00000365151 102 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 RNU5E-7P-201ENST00000365290 117 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 RNA5SP240-201ENST00000365355 128 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 RNU6-47P-201ENST00000383866 107 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 SNORD63-201ENST00000384262 68 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 RNU6-937P-201ENST00000384325 106 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
COL4A4P53420 RNU1-101P-201ENST00000391171 127 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 COX6CP10-201ENST00000416832 224 ntBASIC1.6□□□□□ -2.15
COL4A4P53420 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 253.3 ms