Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.04□□□□□ -2.24
FDFT1P37268 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC1.03□□□□□ -2.24
FDFT1P37268 Y_RNA.179-201ENST00000363844 90 ntBASIC1.03□□□□□ -2.24
FDFT1P37268 Y_RNA.327-201ENST00000365201 102 ntBASIC1.03□□□□□ -2.24
FDFT1P37268 AL356776.1-201ENST00000406574 447 ntBASIC1.03□□□□□ -2.24
FDFT1P37268 RNU6-373P-201ENST00000411247 98 ntBASIC1.03□□□□□ -2.24
FDFT1P37268 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.03□□□□□ -2.24
FDFT1P37268 LINC01323-201ENST00000486767 576 ntTSL 3 BASIC1.03□□□□□ -2.24
FDFT1P37268 AC005840.1-201ENST00000498412 377 ntBASIC1.03□□□□□ -2.24
FDFT1P37268 RNU7-175P-201ENST00000515915 61 ntBASIC1.03□□□□□ -2.24
FDFT1P37268 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC1.03□□□□□ -2.24
FDFT1P37268 MIR5696-201ENST00000578474 85 ntBASIC1.03□□□□□ -2.24
FDFT1P37268 MIR3942-201ENST00000585264 109 ntBASIC1.03□□□□□ -2.24
FDFT1P37268 AC022432.1-201ENST00000595739 310 ntBASIC1.03□□□□□ -2.24
FDFT1P37268 U6.73-201ENST00000619194 103 ntBASIC1.03□□□□□ -2.24
FDFT1P37268 AC090617.10-201ENST00000624308 134 ntBASIC1.03□□□□□ -2.24
FDFT1P37268 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
FDFT1P37268 RNU5F-3P-201ENST00000363767 117 ntBASIC1.02□□□□□ -2.25
FDFT1P37268 RNU4-38P-201ENST00000364472 129 ntBASIC1.02□□□□□ -2.25
FDFT1P37268 Y_RNA.402-201ENST00000383972 102 ntBASIC1.02□□□□□ -2.25
FDFT1P37268 SNORA25-201ENST00000384384 134 ntBASIC1.02□□□□□ -2.25
FDFT1P37268 Y_RNA.533-201ENST00000384596 114 ntBASIC1.02□□□□□ -2.25
FDFT1P37268 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.02□□□□□ -2.25
FDFT1P37268 RNU6-440P-201ENST00000390882 105 ntBASIC1.02□□□□□ -2.25
FDFT1P37268 MRPL42P3-201ENST00000401492 326 ntBASIC1.02□□□□□ -2.25
FDFT1P37268 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.02□□□□□ -2.25
FDFT1P37268 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.02□□□□□ -2.25
FDFT1P37268 MTND3P21-201ENST00000433774 331 ntBASIC1.02□□□□□ -2.25
FDFT1P37268 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.02□□□□□ -2.25
FDFT1P37268 RNU7-128P-201ENST00000517247 62 ntBASIC1.02□□□□□ -2.25
FDFT1P37268 AC134698.4-201ENST00000523451 826 ntBASIC1.02□□□□□ -2.25
FDFT1P37268 AL391516.1-201ENST00000554380 2449 ntBASIC1.02□□□□□ -2.25
FDFT1P37268 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC1.02□□□□□ -2.25
FDFT1P37268 MIR4781-201ENST00000585250 76 ntBASIC1.02□□□□□ -2.25
FDFT1P37268 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.02□□□□□ -2.25
FDFT1P37268 AL021879.1-201ENST00000611756 288 ntBASIC1.02□□□□□ -2.25
FDFT1P37268 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
FDFT1P37268 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
FDFT1P37268 Y_RNA.164-201ENST00000363709 102 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 RNU4-24P-201ENST00000364565 139 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 Y_RNA.405-201ENST00000383979 100 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 Y_RNA.451-201ENST00000384200 100 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 Y_RNA.524-201ENST00000384564 100 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 Y_RNA.561-201ENST00000384694 100 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.01□□□□□ -2.25
FDFT1P37268 AC243428.1-201ENST00000421099 264 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 RPL39P38-201ENST00000467018 153 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 AP000870.1-201ENST00000472927 406 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 AC093534.1-201ENST00000504977 132 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 RNU7-99P-201ENST00000516271 62 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 RNU6-107P-201ENST00000516643 102 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 AC027419.1-201ENST00000522976 328 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 APOOP3-201ENST00000536787 586 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 MIR5695-201ENST00000579717 85 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 BX284668.6-201ENST00000606899 438 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 AC015540.1-201ENST00000615828 501 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 AC012676.2-201ENST00000619258 186 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 AC068647.2-201ENST00000637380 353 ntBASIC1.01□□□□□ -2.25
FDFT1P37268 Y_RNA.184-201ENST00000363884 108 ntBASIC1□□□□□ -2.25
FDFT1P37268 MIR181A1-201ENST00000385026 110 ntBASIC1□□□□□ -2.25
FDFT1P37268 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1□□□□□ -2.25
FDFT1P37268 AL034345.1-201ENST00000407768 123 ntBASIC1□□□□□ -2.25
FDFT1P37268 MTND4P18-201ENST00000447010 465 ntBASIC1□□□□□ -2.25
FDFT1P37268 AC093303.1-201ENST00000514549 295 ntBASIC1□□□□□ -2.25
FDFT1P37268 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1□□□□□ -2.25
FDFT1P37268 AL590705.4-201ENST00000532209 134 ntBASIC1□□□□□ -2.25
FDFT1P37268 AC004584.2-201ENST00000570407 410 ntBASIC1□□□□□ -2.25
FDFT1P37268 MIR4438-201ENST00000585271 93 ntBASIC1□□□□□ -2.25
FDFT1P37268 AL390123.1-201ENST00000603216 237 ntBASIC1□□□□□ -2.25
FDFT1P37268 AL022345.2-201ENST00000606307 135 ntBASIC1□□□□□ -2.25
FDFT1P37268 AC010999.1-201ENST00000611856 324 ntBASIC1□□□□□ -2.25
FDFT1P37268 AC100810.6-201ENST00000638068 285 ntBASIC1□□□□□ -2.25
FDFT1P37268 Y_RNA.9-201ENST00000362354 101 ntBASIC0.99□□□□□ -2.25
FDFT1P37268 RNU6-392P-201ENST00000364926 101 ntBASIC0.99□□□□□ -2.25
FDFT1P37268 MIR10B-201ENST00000385011 110 ntBASIC0.99□□□□□ -2.25
FDFT1P37268 AC009161.1-201ENST00000417306 376 ntBASIC0.99□□□□□ -2.25
FDFT1P37268 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.99□□□□□ -2.25
FDFT1P37268 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.99□□□□□ -2.25
FDFT1P37268 SNORD65B-201ENST00000459126 73 ntBASIC0.99□□□□□ -2.25
FDFT1P37268 RPS27P22-201ENST00000478056 241 ntBASIC0.99□□□□□ -2.25
FDFT1P37268 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.99□□□□□ -2.25
FDFT1P37268 AC023157.2-201ENST00000540596 141 ntBASIC0.99□□□□□ -2.25
FDFT1P37268 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.99□□□□□ -2.25
FDFT1P37268 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC0.99□□□□□ -2.25
FDFT1P37268 AC012557.2-201ENST00000605919 418 ntBASIC0.99□□□□□ -2.25
FDFT1P37268 SNORD3E-202ENST00000627253 216 ntBASIC0.99□□□□□ -2.25
FDFT1P37268 ZNF299P-201ENST00000406845 1804 ntBASIC0.99□□□□□ -2.25
FDFT1P37268 Y_RNA.436-201ENST00000384097 102 ntBASIC0.98□□□□□ -2.25
FDFT1P37268 USMG5P1-201ENST00000425964 177 ntBASIC0.98□□□□□ -2.25
FDFT1P37268 MTND4LP16-201ENST00000440828 295 ntBASIC0.98□□□□□ -2.25
FDFT1P37268 DYNLT3P2-201ENST00000442517 295 ntBASIC0.98□□□□□ -2.25
FDFT1P37268 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.98□□□□□ -2.25
FDFT1P37268 RNU7-94P-201ENST00000459576 63 ntBASIC0.98□□□□□ -2.25
FDFT1P37268 RNU6-864P-201ENST00000516256 108 ntBASIC0.98□□□□□ -2.25
FDFT1P37268 RNU6-1314P-201ENST00000517139 104 ntBASIC0.98□□□□□ -2.25
FDFT1P37268 RNU1-54P-201ENST00000517181 120 ntBASIC0.98□□□□□ -2.25
FDFT1P37268 AC091144.1-201ENST00000519573 138 ntBASIC0.98□□□□□ -2.25
FDFT1P37268 CYCSP23-201ENST00000519781 313 ntBASIC0.98□□□□□ -2.25
FDFT1P37268 AC073349.3-201ENST00000617616 186 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms