Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNY4P14-201ENST00000363656 96 ntBASIC1.07□□□□□ -2.24
RORAP35398 RNU6-1059P-201ENST00000363752 98 ntBASIC1.07□□□□□ -2.24
RORAP35398 Y_RNA.191-201ENST00000363972 113 ntBASIC1.07□□□□□ -2.24
RORAP35398 SNORD114-22-201ENST00000365423 72 ntBASIC1.07□□□□□ -2.24
RORAP35398 Y_RNA.402-201ENST00000383972 102 ntBASIC1.07□□□□□ -2.24
RORAP35398 RNU6-831P-201ENST00000384548 107 ntBASIC1.07□□□□□ -2.24
RORAP35398 Y_RNA.533-201ENST00000384596 114 ntBASIC1.07□□□□□ -2.24
RORAP35398 RNU6-950P-201ENST00000384651 107 ntBASIC1.07□□□□□ -2.24
RORAP35398 MIR181A1-201ENST00000385026 110 ntBASIC1.07□□□□□ -2.24
RORAP35398 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
RORAP35398 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.07□□□□□ -2.24
RORAP35398 RPL30P16-201ENST00000419341 429 ntBASIC1.07□□□□□ -2.24
RORAP35398 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC1.07□□□□□ -2.24
RORAP35398 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.07□□□□□ -2.24
RORAP35398 NDUFB4P10-201ENST00000452541 359 ntBASIC1.07□□□□□ -2.24
RORAP35398 OR2A41P-201ENST00000473586 105 ntBASIC1.07□□□□□ -2.24
RORAP35398 RPS29P25-201ENST00000481709 171 ntBASIC1.07□□□□□ -2.24
RORAP35398 ACA59.1-201ENST00000515966 143 ntBASIC1.07□□□□□ -2.24
RORAP35398 RNU6-1198P-201ENST00000516904 67 ntBASIC1.07□□□□□ -2.24
RORAP35398 RNU6-1314P-201ENST00000517139 104 ntBASIC1.07□□□□□ -2.24
RORAP35398 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC1.07□□□□□ -2.24
RORAP35398 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.07□□□□□ -2.24
RORAP35398 AL512310.8-201ENST00000550183 120 ntBASIC1.07□□□□□ -2.24
RORAP35398 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.07□□□□□ -2.24
RORAP35398 MIR4452-201ENST00000583004 71 ntBASIC1.07□□□□□ -2.24
RORAP35398 AL050343.2-201ENST00000607338 280 ntBASIC1.07□□□□□ -2.24
RORAP35398 AL359075.3-201ENST00000613288 217 ntBASIC1.07□□□□□ -2.24
RORAP35398 U3.8-201ENST00000363675 217 ntBASIC1.06□□□□□ -2.24
RORAP35398 RNU6-137P-201ENST00000363680 108 ntBASIC1.06□□□□□ -2.24
RORAP35398 Y_RNA.224-201ENST00000364308 111 ntBASIC1.06□□□□□ -2.24
RORAP35398 RNU1-93P-201ENST00000364704 169 ntBASIC1.06□□□□□ -2.24
RORAP35398 RNA5SP259-201ENST00000365541 109 ntBASIC1.06□□□□□ -2.24
RORAP35398 SNORA22-201ENST00000383907 134 ntBASIC1.06□□□□□ -2.24
RORAP35398 RNU6-1080P-201ENST00000383982 107 ntBASIC1.06□□□□□ -2.24
RORAP35398 SNORA22C-201ENST00000384614 134 ntBASIC1.06□□□□□ -2.24
RORAP35398 RNU6-1031P-201ENST00000384773 107 ntBASIC1.06□□□□□ -2.24
RORAP35398 MIR10B-201ENST00000385011 110 ntBASIC1.06□□□□□ -2.24
RORAP35398 AL591704.2-201ENST00000421658 181 ntBASIC1.06□□□□□ -2.24
RORAP35398 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.06□□□□□ -2.24
RORAP35398 RPS29P28-201ENST00000446439 141 ntBASIC1.06□□□□□ -2.24
RORAP35398 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.06□□□□□ -2.24
RORAP35398 AP000870.1-201ENST00000472927 406 ntBASIC1.06□□□□□ -2.24
RORAP35398 AC103851.1-201ENST00000506833 274 ntBASIC1.06□□□□□ -2.24
RORAP35398 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.06□□□□□ -2.24
RORAP35398 RNU1-142P-201ENST00000516682 145 ntBASIC1.06□□□□□ -2.24
RORAP35398 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.06□□□□□ -2.24
RORAP35398 EIF1P4-201ENST00000572664 335 ntBASIC1.06□□□□□ -2.24
RORAP35398 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC1.06□□□□□ -2.24
RORAP35398 MIR4295-201ENST00000585286 85 ntBASIC1.06□□□□□ -2.24
RORAP35398 MZT1P2-201ENST00000604387 248 ntBASIC1.06□□□□□ -2.24
RORAP35398 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.06□□□□□ -2.24
RORAP35398 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.06□□□□□ -2.24
RORAP35398 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
RORAP35398 Y_RNA.89-201ENST00000363031 102 ntBASIC1.05□□□□□ -2.24
RORAP35398 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.05□□□□□ -2.24
RORAP35398 AL133373.1-201ENST00000497098 94 ntBASIC1.05□□□□□ -2.24
RORAP35398 RNU6-273P-201ENST00000516937 96 ntBASIC1.05□□□□□ -2.24
RORAP35398 U6.73-201ENST00000619194 103 ntBASIC1.05□□□□□ -2.24
RORAP35398 MIR8054-201ENST00000620877 86 ntBASIC1.05□□□□□ -2.24
RORAP35398 MIR6767-201ENST00000637302 66 ntBASIC1.05□□□□□ -2.24
RORAP35398 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
RORAP35398 SNORD114-27-201ENST00000363766 70 ntBASIC1.04□□□□□ -2.24
RORAP35398 RNU6-596P-201ENST00000365395 98 ntBASIC1.04□□□□□ -2.24
RORAP35398 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.04□□□□□ -2.24
RORAP35398 Y_RNA.450-201ENST00000384198 113 ntBASIC1.04□□□□□ -2.24
RORAP35398 RNU6-793P-201ENST00000384233 104 ntBASIC1.04□□□□□ -2.24
RORAP35398 RNU6-842P-201ENST00000384269 107 ntBASIC1.04□□□□□ -2.24
RORAP35398 MIR518E-201ENST00000385252 88 ntBASIC1.04□□□□□ -2.24
RORAP35398 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.04□□□□□ -2.24
RORAP35398 AC087343.1-201ENST00000477341 475 ntBASIC1.04□□□□□ -2.24
RORAP35398 AC093303.1-201ENST00000514549 295 ntBASIC1.04□□□□□ -2.24
RORAP35398 RNU6-720P-201ENST00000516363 108 ntBASIC1.04□□□□□ -2.24
RORAP35398 SUMO2P16-201ENST00000519475 264 ntBASIC1.04□□□□□ -2.24
RORAP35398 AC091144.1-201ENST00000519573 138 ntBASIC1.04□□□□□ -2.24
RORAP35398 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.04□□□□□ -2.24
RORAP35398 Y_RNA.3-201ENST00000362331 103 ntBASIC1.03□□□□□ -2.24
RORAP35398 RNU6-595P-201ENST00000363944 107 ntBASIC1.03□□□□□ -2.24
RORAP35398 Y_RNA.796-201ENST00000364268 102 ntBASIC1.03□□□□□ -2.24
RORAP35398 Y_RNA.799-201ENST00000364992 102 ntBASIC1.03□□□□□ -2.24
RORAP35398 Y_RNA.355-201ENST00000365462 98 ntBASIC1.03□□□□□ -2.24
RORAP35398 Y_RNA.405-201ENST00000383979 100 ntBASIC1.03□□□□□ -2.24
RORAP35398 Y_RNA.451-201ENST00000384200 100 ntBASIC1.03□□□□□ -2.24
RORAP35398 Y_RNA.508-201ENST00000384502 114 ntBASIC1.03□□□□□ -2.24
RORAP35398 Y_RNA.524-201ENST00000384564 100 ntBASIC1.03□□□□□ -2.24
RORAP35398 Y_RNA.561-201ENST00000384694 100 ntBASIC1.03□□□□□ -2.24
RORAP35398 RNU6-541P-201ENST00000384709 110 ntBASIC1.03□□□□□ -2.24
RORAP35398 RNU6-1186P-201ENST00000410429 97 ntBASIC1.03□□□□□ -2.24
RORAP35398 RNU6-373P-201ENST00000411247 98 ntBASIC1.03□□□□□ -2.24
RORAP35398 USP9YP30-201ENST00000430729 455 ntBASIC1.03□□□□□ -2.24
RORAP35398 MTND4P18-201ENST00000447010 465 ntBASIC1.03□□□□□ -2.24
RORAP35398 MTND1P17-201ENST00000448961 204 ntBASIC1.03□□□□□ -2.24
RORAP35398 HSPE1P13-201ENST00000451143 297 ntBASIC1.03□□□□□ -2.24
RORAP35398 RNU6-165P-201ENST00000517170 99 ntBASIC1.03□□□□□ -2.24
RORAP35398 MIR3664-201ENST00000579074 99 ntBASIC1.03□□□□□ -2.24
RORAP35398 MIR5695-201ENST00000579717 85 ntBASIC1.03□□□□□ -2.24
RORAP35398 AC022432.1-201ENST00000595739 310 ntBASIC1.03□□□□□ -2.24
RORAP35398 AC100810.6-201ENST00000638068 285 ntBASIC1.03□□□□□ -2.24
RORAP35398 Y_RNA.9-201ENST00000362354 101 ntBASIC1.02□□□□□ -2.25
RORAP35398 RNU6-222P-201ENST00000362438 107 ntBASIC1.02□□□□□ -2.25
RORAP35398 Y_RNA.301-201ENST00000364990 103 ntBASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms