Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.37□□□□□ -2.19
CTNNA1P35221 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.37□□□□□ -2.19
CTNNA1P35221 RNU1-54P-201ENST00000517181 120 ntBASIC1.37□□□□□ -2.19
CTNNA1P35221 AL590705.4-201ENST00000532209 134 ntBASIC1.37□□□□□ -2.19
CTNNA1P35221 DNAJC19P9-201ENST00000555084 351 ntBASIC1.37□□□□□ -2.19
CTNNA1P35221 FRG2DP-202ENST00000566967 323 ntBASIC1.37□□□□□ -2.19
CTNNA1P35221 MIR5695-201ENST00000579717 85 ntBASIC1.37□□□□□ -2.19
CTNNA1P35221 MIR4303-201ENST00000581299 66 ntBASIC1.37□□□□□ -2.19
CTNNA1P35221 AC060780.3-201ENST00000589464 80 ntBASIC1.37□□□□□ -2.19
CTNNA1P35221 AC093913.1-201ENST00000614178 329 ntBASIC1.37□□□□□ -2.19
CTNNA1P35221 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.37□□□□□ -2.19
CTNNA1P35221 RNU1-17P-201ENST00000363022 152 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 RNU6-595P-201ENST00000363944 107 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 RNU6-593P-201ENST00000364716 112 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 MIR10B-201ENST00000385011 110 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 RNU6-440P-201ENST00000390882 105 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 RNU6-510P-201ENST00000391239 108 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 USMG5P1-201ENST00000425964 177 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 MTND1P4-201ENST00000435196 415 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 RNU6-329P-201ENST00000459618 107 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 AC004223.1-201ENST00000479840 271 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 MTND5P5-201ENST00000503764 376 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 RNU4-49P-201ENST00000516080 140 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 RNU1-92P-201ENST00000517017 135 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 AF235103.2-201ENST00000525753 346 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.36□□□□□ -2.19
CTNNA1P35221 MIR4438-201ENST00000585271 93 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 AC010999.1-201ENST00000611856 324 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 AC007014.2-201ENST00000615581 479 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 AL513423.1-201ENST00000621695 132 ntBASIC1.36□□□□□ -2.19
CTNNA1P35221 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.35□□□□□ -2.19
CTNNA1P35221 AC091812.1-201ENST00000432235 1948 ntBASIC1.35□□□□□ -2.19
CTNNA1P35221 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.35□□□□□ -2.19
CTNNA1P35221 MIR4790-201ENST00000577799 79 ntBASIC1.35□□□□□ -2.19
CTNNA1P35221 AL021879.1-201ENST00000611756 288 ntBASIC1.35□□□□□ -2.19
CTNNA1P35221 AC068647.2-201ENST00000637380 353 ntBASIC1.35□□□□□ -2.19
CTNNA1P35221 Y_RNA.72-201ENST00000362894 103 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 RNA5SP213-201ENST00000391031 106 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 RNU6-192P-201ENST00000391253 100 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 USP9YP30-201ENST00000430729 455 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 MRPS10P1-201ENST00000448483 130 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 AC092991.1-201ENST00000477176 376 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 RPS27P22-201ENST00000478056 241 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 RNU6-107P-201ENST00000516643 102 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 RNU6-1016P-201ENST00000516689 94 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 MIR3660-201ENST00000584845 100 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 AC068790.6-201ENST00000602558 258 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 AC080078.2-201ENST00000603766 501 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 BNIP3P10-201ENST00000605360 577 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 AC073349.3-201ENST00000617616 186 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 AC006435.5-201ENST00000624486 112 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 SNORD3E-202ENST00000627253 216 ntBASIC1.34□□□□□ -2.19
CTNNA1P35221 ZNF209P-201ENST00000593450 2304 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 Y_RNA.86-201ENST00000363020 111 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 RNU6-457P-201ENST00000363999 107 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 Y_RNA.405-201ENST00000383979 100 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 Y_RNA.451-201ENST00000384200 100 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 RNU6-842P-201ENST00000384269 107 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 RNU6-505P-201ENST00000384427 107 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 Y_RNA.524-201ENST00000384564 100 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 Y_RNA.561-201ENST00000384694 100 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 RNU1-139P-201ENST00000391307 165 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.33□□□□□ -2.2
CTNNA1P35221 MIR548K-201ENST00000408406 116 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.33□□□□□ -2.2
CTNNA1P35221 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.33□□□□□ -2.2
CTNNA1P35221 USP9YP16-201ENST00000430287 407 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 MTND3P23-201ENST00000431980 347 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC1.33□□□□□ -2.2
CTNNA1P35221 USP9YP23-201ENST00000455085 407 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.33□□□□□ -2.2
CTNNA1P35221 RNU6-1114P-201ENST00000516022 107 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 Y_RNA.683-201ENST00000516508 93 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 RNU6-358P-201ENST00000516564 75 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 Y_RNA.706-201ENST00000516933 99 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 AC091144.1-201ENST00000519573 138 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 AC027419.1-201ENST00000522976 328 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 AC090821.2-201ENST00000523552 176 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.33□□□□□ -2.2
CTNNA1P35221 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC1.33□□□□□ -2.2
CTNNA1P35221 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC1.33□□□□□ -2.2
CTNNA1P35221 AL162424.1-201ENST00000602325 221 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 AC018462.2-201ENST00000605375 395 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 MIR6128-201ENST00000615528 109 ntBASIC1.33□□□□□ -2.2
CTNNA1P35221 AC018630.2-201ENST00000534866 2403 ntBASIC1.32□□□□□ -2.2
CTNNA1P35221 RNU6-1059P-201ENST00000363752 98 ntBASIC1.32□□□□□ -2.2
CTNNA1P35221 SNORA12.1-201ENST00000390873 148 ntBASIC1.32□□□□□ -2.2
CTNNA1P35221 SNORA40.6-201ENST00000391153 128 ntBASIC1.32□□□□□ -2.2
CTNNA1P35221 MTND3P8-201ENST00000412909 339 ntBASIC1.32□□□□□ -2.2
CTNNA1P35221 STAG3L5P-204ENST00000443759 179 ntBASIC1.32□□□□□ -2.2
CTNNA1P35221 RN7SKP179-201ENST00000516126 217 ntBASIC1.32□□□□□ -2.2
CTNNA1P35221 RNU6-165P-201ENST00000517170 99 ntBASIC1.32□□□□□ -2.2
CTNNA1P35221 AC023157.2-201ENST00000540596 141 ntBASIC1.32□□□□□ -2.2
CTNNA1P35221 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC1.32□□□□□ -2.2
CTNNA1P35221 MIR5701-3-201ENST00000578890 82 ntBASIC1.32□□□□□ -2.2
CTNNA1P35221 MIR5701-1-201ENST00000585138 82 ntBASIC1.32□□□□□ -2.2
CTNNA1P35221 AC100812.1-201ENST00000607622 580 ntBASIC1.32□□□□□ -2.2
CTNNA1P35221 MIR5701-2-201ENST00000615634 82 ntBASIC1.32□□□□□ -2.2
CTNNA1P35221 PPP1R3A-201ENST00000284601 4384 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
CTNNA1P35221 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.31□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 126.3 ms