Protein–RNA interactions for Protein: P31415

CASQ1, Calsequestrin-1, humanhuman

Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ1P31415 MIR573-201ENST00000384964 99 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 RNA5SP219-201ENST00000390940 113 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 RNU6-1304P-201ENST00000411374 106 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.05□□□□□ -2.4
CASQ1P31415 AL359672.1-201ENST00000442302 409 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 ZNF736P12Y-201ENST00000443152 1243 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 SNRPGP12-201ENST00000449481 213 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 RPS20P10-201ENST00000451209 253 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 MCHR2-AS1-203ENST00000451220 429 ntTSL 3 BASIC0.05□□□□□ -2.4
CASQ1P31415 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC0.05□□□□□ -2.4
CASQ1P31415 AC091179.3-201ENST00000474761 144 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 SNORA14.1-201ENST00000516113 141 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 RNU6-445P-201ENST00000516949 107 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 AC091144.1-201ENST00000519573 138 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC0.05□□□□□ -2.4
CASQ1P31415 AC078938.1-201ENST00000620993 318 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 AC009161.2-201ENST00000624626 138 ntBASIC0.05□□□□□ -2.4
CASQ1P31415 MIR18A-201ENST00000362310 71 ntBASIC0.04□□□□□ -2.4
CASQ1P31415 SNORD50.1-201ENST00000362987 71 ntBASIC0.04□□□□□ -2.4
CASQ1P31415 RNU6-833P-201ENST00000363486 107 ntBASIC0.04□□□□□ -2.4
CASQ1P31415 RNU6-1214P-201ENST00000363650 109 ntBASIC0.04□□□□□ -2.4
CASQ1P31415 RNU6-456P-201ENST00000384493 107 ntBASIC0.04□□□□□ -2.4
CASQ1P31415 MIR562-201ENST00000384894 95 ntBASIC0.04□□□□□ -2.4
CASQ1P31415 RNU6-248P-201ENST00000410720 107 ntBASIC0.04□□□□□ -2.4
CASQ1P31415 RNU6-325P-201ENST00000411132 105 ntBASIC0.04□□□□□ -2.4
CASQ1P31415 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.04□□□□□ -2.4
CASQ1P31415 ZNF885P-201ENST00000420174 1098 ntBASIC0.04□□□□□ -2.4
CASQ1P31415 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC0.04□□□□□ -2.4
CASQ1P31415 MTND4P18-201ENST00000447010 465 ntBASIC0.04□□□□□ -2.4
CASQ1P31415 MTND1P22-201ENST00000510572 951 ntBASIC0.04□□□□□ -2.4
CASQ1P31415 RNU6-237P-201ENST00000515985 71 ntBASIC0.04□□□□□ -2.4
CASQ1P31415 MIR4424-201ENST00000585257 86 ntBASIC0.04□□□□□ -2.4
CASQ1P31415 uc_338.34-201ENST00000617467 174 ntBASIC0.04□□□□□ -2.4
CASQ1P31415 AC008133.2-201ENST00000624540 351 ntBASIC0.04□□□□□ -2.4
CASQ1P31415 Y_RNA.159-201ENST00000363674 87 ntBASIC0.03□□□□□ -2.4
CASQ1P31415 RNU6-873P-201ENST00000363833 107 ntBASIC0.03□□□□□ -2.4
CASQ1P31415 RNU1-133P-201ENST00000364867 167 ntBASIC0.03□□□□□ -2.4
CASQ1P31415 RNU6-245P-201ENST00000384020 107 ntBASIC0.03□□□□□ -2.4
CASQ1P31415 MIR936-201ENST00000401264 98 ntBASIC0.03□□□□□ -2.4
CASQ1P31415 RNU5A-5P-201ENST00000411054 116 ntBASIC0.03□□□□□ -2.4
CASQ1P31415 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC0.03□□□□□ -2.4
CASQ1P31415 BX295541.1-201ENST00000417774 250 ntBASIC0.03□□□□□ -2.4
CASQ1P31415 PIGPP3-201ENST00000425307 415 ntBASIC0.03□□□□□ -2.4
CASQ1P31415 AC079354.2-201ENST00000453523 154 ntBASIC0.03□□□□□ -2.4
CASQ1P31415 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.03□□□□□ -2.4
CASQ1P31415 RNU7-172P-201ENST00000517125 64 ntBASIC0.03□□□□□ -2.4
CASQ1P31415 AP002963.1-201ENST00000530590 184 ntBASIC0.03□□□□□ -2.4
CASQ1P31415 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC0.03□□□□□ -2.4
CASQ1P31415 MTND1P8-201ENST00000571424 950 ntBASIC0.03□□□□□ -2.4
CASQ1P31415 AC087683.1-201ENST00000591187 441 ntBASIC0.03□□□□□ -2.4
CASQ1P31415 LARP7P1-201ENST00000605576 316 ntBASIC0.03□□□□□ -2.4
CASQ1P31415 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
CASQ1P31415 LINC00583-201ENST00000381010 387 ntTSL 2 BASIC0.02□□□□□ -2.41
CASQ1P31415 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.02□□□□□ -2.41
CASQ1P31415 SNORA40.3-201ENST00000390964 122 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 RNA5SP482-201ENST00000391269 118 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 MIR891A-201ENST00000401237 79 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 AL603825.1-201ENST00000438481 80 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 AL031667.1-201ENST00000440222 725 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC0.02□□□□□ -2.41
CASQ1P31415 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.02□□□□□ -2.41
CASQ1P31415 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC0.02□□□□□ -2.41
CASQ1P31415 snoU13.21-201ENST00000459368 105 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 AC092436.3-201ENST00000511788 257 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 SNORA25.14-201ENST00000516481 132 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 RNU6-1223P-201ENST00000517124 104 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.02□□□□□ -2.41
CASQ1P31415 AP003461.1-201ENST00000528866 78 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 AP002004.2-201ENST00000531656 154 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 AL118558.2-201ENST00000556294 238 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 AC087683.2-201ENST00000611384 326 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 AP001506.1-201ENST00000615444 211 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 RMST_2.1-201ENST00000617263 136 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 AP002371.2-201ENST00000624450 503 ntBASIC0.02□□□□□ -2.41
CASQ1P31415 AL589743.1-201ENST00000551932 2712 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 SNORD113.3-201ENST00000364630 78 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 SNORA25.9-201ENST00000365087 128 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 RNU6-815P-201ENST00000384080 113 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 SNORA20B-201ENST00000384220 132 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 MIR620-201ENST00000385232 95 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 MTCO3P19-201ENST00000415864 321 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 AC073415.1-201ENST00000449240 153 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 AL356010.1-201ENST00000456364 102 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 AC093534.1-201ENST00000504977 132 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC0.01□□□□□ -2.41
CASQ1P31415 SNORA74.3-201ENST00000517108 154 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 NTS-203ENST00000551529 801 ntTSL 3 BASIC0.01□□□□□ -2.41
CASQ1P31415 UBL5P4-201ENST00000562584 236 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 MIR4300-201ENST00000581016 96 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 MIR3682-201ENST00000581338 84 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 AC010999.1-201ENST00000611856 324 ntBASIC0.01□□□□□ -2.41
CASQ1P31415 LRRD1-203ENST00000430130 2661 ntAPPRIS P1 TSL 5 BASIC0.01□□□□□ -2.41
CASQ1P31415 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC0.01□□□□□ -2.41
CASQ1P31415 RNA5SP62-201ENST00000363457 110 ntBASIC0□□□□□ -2.41
CASQ1P31415 RNA5SP517-201ENST00000364724 117 ntBASIC0□□□□□ -2.41
CASQ1P31415 MIR516B2-201ENST00000385190 85 ntBASIC0□□□□□ -2.41
CASQ1P31415 MIR1298-201ENST00000408783 112 ntBASIC0□□□□□ -2.41
CASQ1P31415 RNA5SP193-201ENST00000410353 107 ntBASIC0□□□□□ -2.41
CASQ1P31415 SNORD83.1-201ENST00000411362 77 ntBASIC0□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 170.9 ms