Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 U8.16-201ENST00000391279 133 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC-0.21□□□□□ -2.44
ABCA1O95477 RNU7-56P-201ENST00000458744 62 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 RNU6-782P-201ENST00000516852 104 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC-0.21□□□□□ -2.44
ABCA1O95477 RNY1P9-201ENST00000532431 109 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC-0.21□□□□□ -2.44
ABCA1O95477 AC023827.1-201ENST00000569247 97 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 MIR3678-201ENST00000578455 94 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 FGF7P1-201ENST00000582820 288 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 AC091178.2-201ENST00000584401 117 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 AC120024.3-201ENST00000603167 156 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 MIR1-1-201ENST00000362147 71 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 RNU5B-2P-201ENST00000363036 113 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 MIR548H2-201ENST00000408874 88 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 AC016909.1-201ENST00000415916 166 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC-0.21□□□□□ -2.44
ABCA1O95477 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC-0.21□□□□□ -2.44
ABCA1O95477 MIR3681-201ENST00000580089 72 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 MIR4438-201ENST00000585271 93 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 AC010525.2-201ENST00000590920 195 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 AP001542.1-201ENST00000591314 200 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 AC092447.9-201ENST00000603395 144 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 AL121895.2-201ENST00000619558 447 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 AC139792.3-201ENST00000623525 224 ntBASIC-0.21□□□□□ -2.44
ABCA1O95477 SNORA25.3-201ENST00000363205 127 ntBASIC-0.22□□□□□ -2.44
ABCA1O95477 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.22□□□□□ -2.44
ABCA1O95477 Y_RNA.568-201ENST00000384742 113 ntBASIC-0.22□□□□□ -2.44
ABCA1O95477 MIR760-201ENST00000390220 80 ntBASIC-0.22□□□□□ -2.44
ABCA1O95477 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC-0.22□□□□□ -2.44
ABCA1O95477 MTCO2P6-201ENST00000463134 685 ntBASIC-0.22□□□□□ -2.44
ABCA1O95477 AC010587.1-201ENST00000505809 469 ntBASIC-0.22□□□□□ -2.44
ABCA1O95477 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC-0.22□□□□□ -2.44
ABCA1O95477 RNU7-12P-201ENST00000516030 62 ntBASIC-0.22□□□□□ -2.44
ABCA1O95477 RN7SKP164-201ENST00000516138 266 ntBASIC-0.22□□□□□ -2.44
ABCA1O95477 AC010376.1-201ENST00000522101 334 ntBASIC-0.22□□□□□ -2.44
ABCA1O95477 AC138869.1-201ENST00000568623 124 ntBASIC-0.22□□□□□ -2.44
ABCA1O95477 MIR4743-201ENST00000584576 69 ntBASIC-0.22□□□□□ -2.44
ABCA1O95477 BNIP3P40-201ENST00000596017 556 ntBASIC-0.22□□□□□ -2.44
ABCA1O95477 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC-0.22□□□□□ -2.44
ABCA1O95477 MIR8076-201ENST00000611401 83 ntBASIC-0.22□□□□□ -2.44
ABCA1O95477 AC019226.2-201ENST00000625973 424 ntBASIC-0.22□□□□□ -2.44
ABCA1O95477 SNORA72.1-201ENST00000363485 129 ntBASIC-0.22□□□□□ -2.45
ABCA1O95477 SNORA75.6-201ENST00000391318 127 ntBASIC-0.22□□□□□ -2.45
ABCA1O95477 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.22□□□□□ -2.45
ABCA1O95477 SNORD57-201ENST00000448188 72 ntBASIC-0.22□□□□□ -2.45
ABCA1O95477 AC105185.1-201ENST00000518705 535 ntBASIC-0.22□□□□□ -2.45
ABCA1O95477 RPL23AP91-201ENST00000569211 455 ntBASIC-0.22□□□□□ -2.45
ABCA1O95477 AC015726.2-201ENST00000620112 122 ntBASIC-0.22□□□□□ -2.45
ABCA1O95477 AC027279.3-201ENST00000625055 122 ntBASIC-0.22□□□□□ -2.45
ABCA1O95477 RNA5SP48-201ENST00000363969 126 ntBASIC-0.23□□□□□ -2.45
ABCA1O95477 RNU6-396P-201ENST00000365369 105 ntBASIC-0.23□□□□□ -2.45
ABCA1O95477 RNU6-756P-201ENST00000383997 107 ntBASIC-0.23□□□□□ -2.45
ABCA1O95477 RNU6-1093P-201ENST00000391194 107 ntBASIC-0.23□□□□□ -2.45
ABCA1O95477 AL136310.1-201ENST00000404926 654 ntBASIC-0.23□□□□□ -2.45
ABCA1O95477 MED13P1-201ENST00000428342 171 ntBASIC-0.23□□□□□ -2.45
ABCA1O95477 CALM2P4-201ENST00000430810 426 ntBASIC-0.23□□□□□ -2.45
ABCA1O95477 AC005002.2-201ENST00000438228 269 ntBASIC-0.23□□□□□ -2.45
ABCA1O95477 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC-0.23□□□□□ -2.45
ABCA1O95477 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC-0.23□□□□□ -2.45
ABCA1O95477 RNA5SP268-201ENST00000516828 124 ntBASIC-0.23□□□□□ -2.45
ABCA1O95477 AC007751.1-201ENST00000529260 376 ntBASIC-0.23□□□□□ -2.45
ABCA1O95477 MIR6079-201ENST00000635807 62 ntBASIC-0.23□□□□□ -2.45
ABCA1O95477 RNU6-428P-201ENST00000362942 107 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 RNU6-364P-201ENST00000384387 107 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 Y_RNA.576-201ENST00000384781 102 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 MIR643-201ENST00000385267 97 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 AC096531.1-201ENST00000419107 107 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 MTCO2P3-201ENST00000442543 421 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 HSPE1P23-201ENST00000509838 286 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 AC010493.1-201ENST00000513479 292 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 AC069113.1-201ENST00000517763 267 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 AC025647.1-201ENST00000517879 253 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 AL358944.1-201ENST00000528537 144 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 AC138749.5-201ENST00000611461 208 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.24□□□□□ -2.45
ABCA1O95477 MTND4P9-201ENST00000507819 1346 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 RNU6-674P-201ENST00000363831 107 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 RNU6-641P-201ENST00000384006 107 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 MIR1302-7-201ENST00000408841 72 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 RNU4-63P-201ENST00000411313 118 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 RPS3AP3-201ENST00000411933 242 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 AC010975.2-201ENST00000427781 588 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 AC007215.1-201ENST00000464893 276 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 SNORA31.10-201ENST00000516482 106 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC-0.24□□□□□ -2.45
ABCA1O95477 AC026470.2-201ENST00000561492 181 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC-0.24□□□□□ -2.45
ABCA1O95477 MIR3192-201ENST00000584920 77 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 Six3os1_7.1-201ENST00000621512 201 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 AL445984.1-201ENST00000637834 659 ntBASIC-0.24□□□□□ -2.45
ABCA1O95477 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.24□□□□□ -2.45
ABCA1O95477 RNU6-827P-201ENST00000365553 106 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 RNU6-376P-201ENST00000384731 106 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 MIR635-201ENST00000384830 98 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 MIR196A2-201ENST00000385189 110 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 RNU6-269P-201ENST00000391077 97 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 MIR892B-201ENST00000401279 77 ntBASIC-0.25□□□□□ -2.45
ABCA1O95477 ELOCP4-201ENST00000420090 333 ntBASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms