Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.91□□□□□ -2.1
NKX2-2O95096 RNU6-454P-201ENST00000364292 107 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 RNA5SP475-201ENST00000410568 110 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 RNA5SP100-201ENST00000410903 110 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 RNA5SP59-201ENST00000410922 110 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 AC009310.1-201ENST00000414414 451 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.91□□□□□ -2.1
NKX2-2O95096 AL021397.1-201ENST00000451806 248 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 SNORD65B-201ENST00000459126 73 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 SNORA59A-201ENST00000459326 152 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 AC090255.1-201ENST00000495779 349 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 IGKV3-31-201ENST00000523109 329 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 MIR3171-201ENST00000584270 74 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 AC044792.1-201ENST00000593294 196 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 AC005034.5-201ENST00000604219 466 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 MIR6840-201ENST00000611937 71 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 AC011476.5-201ENST00000615594 130 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 MIR219B-201ENST00000637023 88 ntBASIC1.91□□□□□ -2.1
NKX2-2O95096 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
NKX2-2O95096 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
NKX2-2O95096 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.9□□□□□ -2.11
NKX2-2O95096 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
NKX2-2O95096 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NKX2-2O95096 RNU6-1019P-201ENST00000364424 107 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 SNORA72.2-201ENST00000365028 127 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 SNORD14.1-201ENST00000365609 90 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 SNORA22B-201ENST00000383876 138 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 SNORA64-201ENST00000384674 134 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 RNU6-417P-201ENST00000384712 107 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 AL023284.1-201ENST00000403956 276 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 AC244636.1-201ENST00000421152 228 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC1.9□□□□□ -2.11
NKX2-2O95096 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.9□□□□□ -2.11
NKX2-2O95096 DPH3P2-201ENST00000422618 250 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 AC245047.4-201ENST00000433189 144 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC1.9□□□□□ -2.11
NKX2-2O95096 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
NKX2-2O95096 RPL23AP7-203ENST00000449021 469 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 RNA5SP233-201ENST00000459153 113 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 AL163540.1-201ENST00000485382 386 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 RPS27P21-201ENST00000486977 252 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 AC010598.1-201ENST00000510378 103 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 AC040926.1-201ENST00000530195 238 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.9□□□□□ -2.11
NKX2-2O95096 AC121758.2-201ENST00000553271 193 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 AC022254.1-201ENST00000567857 235 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 AC005828.6-201ENST00000606610 232 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.9□□□□□ -2.11
NKX2-2O95096 AC092881.1-201ENST00000638218 2733 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 Y_RNA.230-201ENST00000364348 109 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 RNU4-50P-201ENST00000364361 141 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 RNA5SP160-201ENST00000364866 120 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 RNU6-1227P-201ENST00000383981 107 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 Y_RNA.458-201ENST00000384240 102 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 SNORA51.11-201ENST00000384442 131 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 Y_RNA.645-201ENST00000391229 102 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 AL139156.1-201ENST00000412785 841 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.89□□□□□ -2.11
NKX2-2O95096 SUMO1P2-201ENST00000452524 304 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 RNU6-717P-201ENST00000459076 104 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 RNU1-40P-201ENST00000516816 164 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 RNU1-97P-201ENST00000516872 164 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 IGLV3-17-201ENST00000519099 244 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 AC024995.1-201ENST00000523014 93 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.89□□□□□ -2.11
NKX2-2O95096 AC055872.1-201ENST00000570978 278 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 MIR4299-201ENST00000577899 72 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 MIR5694-201ENST00000581190 76 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 AL390123.1-201ENST00000603216 237 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 AC010900.2-201ENST00000604508 210 ntBASIC1.89□□□□□ -2.11
NKX2-2O95096 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
NKX2-2O95096 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NKX2-2O95096 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NKX2-2O95096 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
NKX2-2O95096 RNU6-112P-201ENST00000363599 104 ntBASIC1.88□□□□□ -2.11
NKX2-2O95096 AC117470.1-201ENST00000381974 330 ntBASIC1.88□□□□□ -2.11
NKX2-2O95096 RNU6-20P-201ENST00000384106 107 ntBASIC1.88□□□□□ -2.11
NKX2-2O95096 SNORA67.3-201ENST00000384366 140 ntBASIC1.88□□□□□ -2.11
NKX2-2O95096 MIR23A-201ENST00000385245 73 ntBASIC1.88□□□□□ -2.11
NKX2-2O95096 AC005534.2-201ENST00000431047 433 ntBASIC1.88□□□□□ -2.11
NKX2-2O95096 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.88□□□□□ -2.11
NKX2-2O95096 RNU2-12P-201ENST00000517216 168 ntBASIC1.88□□□□□ -2.11
NKX2-2O95096 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.88□□□□□ -2.11
NKX2-2O95096 AL137100.2-201ENST00000555786 315 ntBASIC1.88□□□□□ -2.11
NKX2-2O95096 Y_RNA.772-201ENST00000606692 102 ntBASIC1.88□□□□□ -2.11
NKX2-2O95096 AL627230.6-201ENST00000611129 280 ntBASIC1.88□□□□□ -2.11
NKX2-2O95096 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.88□□□□□ -2.11
NKX2-2O95096 AC004467.1-201ENST00000615678 330 ntBASIC1.88□□□□□ -2.11
NKX2-2O95096 AC091932.3-201ENST00000624223 323 ntBASIC1.88□□□□□ -2.11
NKX2-2O95096 U6.115-201ENST00000636045 103 ntBASIC1.88□□□□□ -2.11
NKX2-2O95096 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
NKX2-2O95096 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.87□□□□□ -2.11
NKX2-2O95096 RNU6-626P-201ENST00000363354 107 ntBASIC1.87□□□□□ -2.11
NKX2-2O95096 SNORA33-201ENST00000363664 130 ntBASIC1.87□□□□□ -2.11
NKX2-2O95096 Y_RNA.243-201ENST00000364481 109 ntBASIC1.87□□□□□ -2.11
NKX2-2O95096 Y_RNA.361-201ENST00000365515 120 ntBASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms