Protein–RNA interactions for Protein: O75534

CSDE1, Cold shock domain-containing protein E1, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1O75534 HMGN1P13-201ENST00000505795 138 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 AC025465.3-201ENST00000510570 311 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 AC093303.1-201ENST00000514549 295 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 RNU6-559P-201ENST00000516151 98 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 RNU6-1146P-201ENST00000516282 102 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 RNU6-107P-201ENST00000516643 102 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 AC105029.1-201ENST00000520250 669 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 MIR4801-201ENST00000582704 82 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 AC016925.2-201ENST00000605108 242 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 RNU6ATAC35P-201ENST00000609276 444 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 AC126177.8-201ENST00000618339 1015 ntBASIC1.57□□□□□ -2.16
CSDE1O75534 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
CSDE1O75534 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
CSDE1O75534 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC1.56□□□□□ -2.16
CSDE1O75534 SNORA72.1-201ENST00000363485 129 ntBASIC1.56□□□□□ -2.16
CSDE1O75534 Y_RNA.142-201ENST00000363491 102 ntBASIC1.56□□□□□ -2.16
CSDE1O75534 Y_RNA.364-201ENST00000365532 101 ntBASIC1.56□□□□□ -2.16
CSDE1O75534 MIR548B-201ENST00000385247 97 ntBASIC1.56□□□□□ -2.16
CSDE1O75534 MIR320A-201ENST00000385302 82 ntBASIC1.56□□□□□ -2.16
CSDE1O75534 RNU1-139P-201ENST00000391307 165 ntBASIC1.56□□□□□ -2.16
CSDE1O75534 RN7SKP51-201ENST00000410781 304 ntBASIC1.56□□□□□ -2.16
CSDE1O75534 EBAG9P1-201ENST00000418955 543 ntBASIC1.56□□□□□ -2.16
CSDE1O75534 AC008134.1-201ENST00000420943 193 ntBASIC1.56□□□□□ -2.16
CSDE1O75534 SNRPGP13-201ENST00000442212 177 ntBASIC1.56□□□□□ -2.16
CSDE1O75534 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC1.56□□□□□ -2.16
CSDE1O75534 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.56□□□□□ -2.16
CSDE1O75534 Y_RNA.683-201ENST00000516508 93 ntBASIC1.56□□□□□ -2.16
CSDE1O75534 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC1.56□□□□□ -2.16
CSDE1O75534 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC1.56□□□□□ -2.16
CSDE1O75534 MIR5690-201ENST00000583739 73 ntBASIC1.56□□□□□ -2.16
CSDE1O75534 MZT1P2-201ENST00000604387 248 ntBASIC1.56□□□□□ -2.16
CSDE1O75534 AC113139.1-201ENST00000605049 239 ntBASIC1.56□□□□□ -2.16
CSDE1O75534 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC1.56□□□□□ -2.16
CSDE1O75534 MTND5P35-201ENST00000557537 1720 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 RNU6-1266P-201ENST00000362794 105 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 snoU2-30.2-201ENST00000362805 70 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 U3.8-201ENST00000363675 217 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 RNU6-414P-201ENST00000363705 104 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 RNU6-879P-201ENST00000364328 108 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 Y_RNA.327-201ENST00000365201 102 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 RNU6-1001P-201ENST00000411265 100 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.55□□□□□ -2.16
CSDE1O75534 MTND4P18-201ENST00000447010 465 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC1.55□□□□□ -2.16
CSDE1O75534 RPL17P19-201ENST00000489069 552 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 RNU6-970P-201ENST00000516312 107 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 RNU6-264P-201ENST00000517134 104 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 AC022868.1-201ENST00000517767 391 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC1.55□□□□□ -2.16
CSDE1O75534 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC1.55□□□□□ -2.16
CSDE1O75534 AC090617.3-201ENST00000573670 475 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 UBE2V2P2-201ENST00000587677 504 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC1.55□□□□□ -2.16
CSDE1O75534 MIR1244-1-201ENST00000612829 85 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 MIR1244-3-201ENST00000635744 85 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 MIR338-201ENST00000636369 67 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 MIR1244-2-201ENST00000636449 85 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 MIR1244-4-202ENST00000636813 85 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 AP000648.3-201ENST00000623539 4507 ntBASIC1.55□□□□□ -2.16
CSDE1O75534 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC1.55□□□□□ -2.16
CSDE1O75534 RNU6-112P-201ENST00000363599 104 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 Y_RNA.358-201ENST00000365491 99 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 RNU6-439P-201ENST00000384188 106 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 RNU6-310P-201ENST00000384655 107 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 RNU6-417P-201ENST00000384712 107 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 MIR520A-201ENST00000384862 85 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 RNA5SP323-201ENST00000391094 133 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 CST2P1-201ENST00000425770 87 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 UBE2V1P7-201ENST00000446395 340 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.54□□□□□ -2.16
CSDE1O75534 RPL30P15-201ENST00000457129 321 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 snoU13.9-201ENST00000458927 103 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 RNU1-98P-201ENST00000458992 160 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 RNU6-221P-201ENST00000459541 99 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 Y_RNA.675-201ENST00000516389 149 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 AL353149.1-201ENST00000610667 244 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC1.54□□□□□ -2.16
CSDE1O75534 AL157834.3-201ENST00000615543 103 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.54□□□□□ -2.16
CSDE1O75534 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
CSDE1O75534 MTND5P10-201ENST00000603719 1809 ntBASIC1.54□□□□□ -2.16
CSDE1O75534 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CSDE1O75534 RNU6-874P-201ENST00000362390 105 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 RNU6-1188P-201ENST00000363795 107 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 RNU6-1019P-201ENST00000364424 107 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 RNU6-99P-201ENST00000364721 107 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 RNU6-281P-201ENST00000384212 103 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 RNU6-1297P-201ENST00000384415 104 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 AL117342.1-201ENST00000404861 406 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 Y_RNA.646-201ENST00000410980 101 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 UQCRBP2-201ENST00000447827 297 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 Y_RNA.653-201ENST00000459091 95 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 RPL36AP21-201ENST00000490372 323 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.53□□□□□ -2.16
CSDE1O75534 AC025647.1-201ENST00000517879 253 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 APOOP3-201ENST00000536787 586 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 AC125232.2-201ENST00000592457 143 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 AC010615.1-201ENST00000594254 1764 ntBASIC1.53□□□□□ -2.16
CSDE1O75534 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.53□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms