Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 SNORA33-201ENST00000363664 130 ntBASIC4.26□□□□□ -1.73
RNF40O75150 RNU6-198P-201ENST00000384258 104 ntBASIC4.26□□□□□ -1.73
RNF40O75150 MIR520G-201ENST00000385064 90 ntBASIC4.26□□□□□ -1.73
RNF40O75150 MIR1912-201ENST00000410389 80 ntBASIC4.26□□□□□ -1.73
RNF40O75150 SNRPGP5-201ENST00000456003 220 ntBASIC4.26□□□□□ -1.73
RNF40O75150 RNA5SP246-201ENST00000458909 119 ntBASIC4.26□□□□□ -1.73
RNF40O75150 RPL23AP67-201ENST00000465341 474 ntBASIC4.26□□□□□ -1.73
RNF40O75150 RNA5SP490-201ENST00000517141 136 ntBASIC4.26□□□□□ -1.73
RNF40O75150 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.26□□□□□ -1.73
RNF40O75150 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.26□□□□□ -1.73
RNF40O75150 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.26□□□□□ -1.73
RNF40O75150 AC013412.1-201ENST00000610687 192 ntBASIC4.26□□□□□ -1.73
RNF40O75150 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC4.26□□□□□ -1.73
RNF40O75150 FAS-AS1.2-201ENST00000620386 170 ntBASIC4.26□□□□□ -1.73
RNF40O75150 MIR6075-201ENST00000620782 95 ntBASIC4.26□□□□□ -1.73
RNF40O75150 MIR6500-201ENST00000622700 86 ntBASIC4.26□□□□□ -1.73
RNF40O75150 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.26□□□□□ -1.73
RNF40O75150 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
RNF40O75150 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
RNF40O75150 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC4.25□□□□□ -1.73
RNF40O75150 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF40O75150 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF40O75150 ZNF720P1-201ENST00000562403 1939 ntBASIC4.25□□□□□ -1.73
RNF40O75150 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
RNF40O75150 IPO8P1-201ENST00000455509 3109 ntBASIC4.25□□□□□ -1.73
RNF40O75150 RNU6-1125P-201ENST00000363601 107 ntBASIC4.25□□□□□ -1.73
RNF40O75150 RN7SKP177-201ENST00000410567 355 ntBASIC4.25□□□□□ -1.73
RNF40O75150 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF40O75150 SNRPGP10-201ENST00000432323 225 ntBASIC4.25□□□□□ -1.73
RNF40O75150 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.25□□□□□ -1.73
RNF40O75150 RNU7-61P-201ENST00000515897 61 ntBASIC4.25□□□□□ -1.73
RNF40O75150 RNU6ATAC12P-201ENST00000516542 115 ntBASIC4.25□□□□□ -1.73
RNF40O75150 AP000867.2-201ENST00000532468 320 ntBASIC4.25□□□□□ -1.73
RNF40O75150 AC022254.1-201ENST00000567857 235 ntBASIC4.25□□□□□ -1.73
RNF40O75150 MIR5685-201ENST00000579080 79 ntBASIC4.25□□□□□ -1.73
RNF40O75150 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
RNF40O75150 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
RNF40O75150 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF40O75150 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RNF40O75150 RNU6-979P-201ENST00000383896 107 ntBASIC4.24□□□□□ -1.73
RNF40O75150 RNU6-1274P-201ENST00000384557 107 ntBASIC4.24□□□□□ -1.73
RNF40O75150 RNU6-816P-201ENST00000390914 107 ntBASIC4.24□□□□□ -1.73
RNF40O75150 RNU6-1268P-201ENST00000391214 107 ntBASIC4.24□□□□□ -1.73
RNF40O75150 RNU6-1239P-201ENST00000391310 107 ntBASIC4.24□□□□□ -1.73
RNF40O75150 Y_RNA.601-201ENST00000410500 113 ntBASIC4.24□□□□□ -1.73
RNF40O75150 CRYBB2P1-203ENST00000415709 538 ntBASIC4.24□□□□□ -1.73
RNF40O75150 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF40O75150 AC009238.1-201ENST00000442165 424 ntBASIC4.24□□□□□ -1.73
RNF40O75150 AC009237.6-201ENST00000446969 424 ntBASIC4.24□□□□□ -1.73
RNF40O75150 AL133162.1-201ENST00000463228 453 ntBASIC4.24□□□□□ -1.73
RNF40O75150 RAC1P2-201ENST00000511164 579 ntBASIC4.24□□□□□ -1.73
RNF40O75150 CR392039.5-201ENST00000623201 510 ntBASIC4.24□□□□□ -1.73
RNF40O75150 AC006504.1-201ENST00000562493 3666 ntBASIC4.24□□□□□ -1.73
RNF40O75150 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF40O75150 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RNF40O75150 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC4.24□□□□□ -1.73
RNF40O75150 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF40O75150 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF40O75150 SNORA70.4-201ENST00000365509 134 ntBASIC4.23□□□□□ -1.73
RNF40O75150 Y_RNA.410-201ENST00000383992 113 ntBASIC4.23□□□□□ -1.73
RNF40O75150 RNY1P6-201ENST00000384193 109 ntBASIC4.23□□□□□ -1.73
RNF40O75150 RNU6-242P-201ENST00000384359 107 ntBASIC4.23□□□□□ -1.73
RNF40O75150 MIR200C-201ENST00000384980 68 ntBASIC4.23□□□□□ -1.73
RNF40O75150 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RNF40O75150 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC4.23□□□□□ -1.73
RNF40O75150 GOT2P5-201ENST00000433995 546 ntBASIC4.23□□□□□ -1.73
RNF40O75150 RNU7-164P-201ENST00000459221 62 ntBASIC4.23□□□□□ -1.73
RNF40O75150 AC091826.1-201ENST00000514065 313 ntBASIC4.23□□□□□ -1.73
RNF40O75150 RNU6-857P-201ENST00000515893 110 ntBASIC4.23□□□□□ -1.73
RNF40O75150 AC244505.7-201ENST00000599675 272 ntBASIC4.23□□□□□ -1.73
RNF40O75150 MIR6076-201ENST00000617521 113 ntBASIC4.23□□□□□ -1.73
RNF40O75150 U7.8-201ENST00000619968 63 ntBASIC4.23□□□□□ -1.73
RNF40O75150 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RNF40O75150 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC4.23□□□□□ -1.73
RNF40O75150 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RNF40O75150 SYT14-208ENST00000637265 13567 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF40O75150 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
RNF40O75150 SNORA71.3-201ENST00000362582 128 ntBASIC4.22□□□□□ -1.73
RNF40O75150 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.22□□□□□ -1.73
RNF40O75150 AL451046.2-201ENST00000403074 277 ntBASIC4.22□□□□□ -1.73
RNF40O75150 AC097463.2-201ENST00000421074 142 ntBASIC4.22□□□□□ -1.73
RNF40O75150 AC004941.2-201ENST00000427009 228 ntBASIC4.22□□□□□ -1.73
RNF40O75150 HMGN2P31-201ENST00000432430 273 ntBASIC4.22□□□□□ -1.73
RNF40O75150 AC025750.2-201ENST00000442609 450 ntBASIC4.22□□□□□ -1.73
RNF40O75150 HMGN2P16-201ENST00000456802 261 ntBASIC4.22□□□□□ -1.73
RNF40O75150 RPS29P21-201ENST00000496272 170 ntBASIC4.22□□□□□ -1.73
RNF40O75150 AC026726.1-201ENST00000512859 601 ntBASIC4.22□□□□□ -1.73
RNF40O75150 SCGB1D5P-201ENST00000515134 247 ntBASIC4.22□□□□□ -1.73
RNF40O75150 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.22□□□□□ -1.73
RNF40O75150 IGLL4P-201ENST00000614590 133 ntBASIC4.22□□□□□ -1.73
RNF40O75150 U7.3-201ENST00000616123 62 ntBASIC4.22□□□□□ -1.73
RNF40O75150 MIR7151-201ENST00000617477 60 ntBASIC4.22□□□□□ -1.73
RNF40O75150 AC090517.3-201ENST00000625170 141 ntBASIC4.22□□□□□ -1.73
RNF40O75150 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
RNF40O75150 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNF40O75150 TNPO1P3-201ENST00000436471 2662 ntBASIC4.22□□□□□ -1.73
RNF40O75150 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC4.22□□□□□ -1.73
RNF40O75150 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
RNF40O75150 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC4.22□□□□□ -1.73
RNF40O75150 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms