Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.96□□□□□ -1.78
GFRA3O60609 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.96□□□□□ -1.78
GFRA3O60609 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
GFRA3O60609 AL133412.1-201ENST00000380194 2992 ntBASIC3.96□□□□□ -1.78
GFRA3O60609 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.96□□□□□ -1.78
GFRA3O60609 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC3.96□□□□□ -1.78
GFRA3O60609 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
GFRA3O60609 PWAR6-201ENST00000552334 4618 ntBASIC3.95□□□□□ -1.78
GFRA3O60609 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
GFRA3O60609 Y_RNA.532-201ENST00000384590 113 ntBASIC3.95□□□□□ -1.78
GFRA3O60609 COTL1P1-201ENST00000422309 375 ntBASIC3.95□□□□□ -1.78
GFRA3O60609 AC006011.1-201ENST00000442758 349 ntBASIC3.95□□□□□ -1.78
GFRA3O60609 AC006445.1-201ENST00000491925 405 ntBASIC3.95□□□□□ -1.78
GFRA3O60609 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.95□□□□□ -1.78
GFRA3O60609 SNORA18.7-201ENST00000516910 131 ntBASIC3.95□□□□□ -1.78
GFRA3O60609 HMSD-204ENST00000526932 162 ntTSL 3 BASIC3.95□□□□□ -1.78
GFRA3O60609 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC3.95□□□□□ -1.78
GFRA3O60609 RPL23AP97-201ENST00000568955 471 ntBASIC3.95□□□□□ -1.78
GFRA3O60609 MIR5684-201ENST00000585074 65 ntBASIC3.95□□□□□ -1.78
GFRA3O60609 AC013412.1-201ENST00000610687 192 ntBASIC3.95□□□□□ -1.78
GFRA3O60609 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
GFRA3O60609 AC026241.1-201ENST00000517873 2142 ntBASIC3.95□□□□□ -1.78
GFRA3O60609 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
GFRA3O60609 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC3.95□□□□□ -1.78
GFRA3O60609 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
GFRA3O60609 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.94□□□□□ -1.78
GFRA3O60609 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.94□□□□□ -1.78
GFRA3O60609 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC3.94□□□□□ -1.78
GFRA3O60609 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC3.94□□□□□ -1.78
GFRA3O60609 AL049781.1-201ENST00000623195 3585 ntBASIC3.94□□□□□ -1.78
GFRA3O60609 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA3O60609 AL627390.1-201ENST00000396055 340 ntBASIC3.94□□□□□ -1.78
GFRA3O60609 AC244098.2-201ENST00000422068 99 ntBASIC3.94□□□□□ -1.78
GFRA3O60609 AL445646.1-201ENST00000431784 216 ntBASIC3.94□□□□□ -1.78
GFRA3O60609 AC108751.2-201ENST00000469993 231 ntBASIC3.94□□□□□ -1.78
GFRA3O60609 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.94□□□□□ -1.78
GFRA3O60609 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.94□□□□□ -1.78
GFRA3O60609 RNU6-1258P-201ENST00000516911 111 ntBASIC3.94□□□□□ -1.78
GFRA3O60609 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC3.94□□□□□ -1.78
GFRA3O60609 AC006064.5-201ENST00000541782 248 ntBASIC3.94□□□□□ -1.78
GFRA3O60609 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC3.94□□□□□ -1.78
GFRA3O60609 IGKV1-33-202ENST00000558152 324 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
GFRA3O60609 AC012493.2-201ENST00000595083 291 ntBASIC3.94□□□□□ -1.78
GFRA3O60609 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
GFRA3O60609 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC3.94□□□□□ -1.78
GFRA3O60609 AC093908.1-201ENST00000623125 8092 ntBASIC3.94□□□□□ -1.78
GFRA3O60609 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA3O60609 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA3O60609 NEAT1-202ENST00000501122 22743 ntBASIC3.94□□□□□ -1.78
GFRA3O60609 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA3O60609 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA3O60609 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
GFRA3O60609 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
GFRA3O60609 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC3.93□□□□□ -1.78
GFRA3O60609 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
GFRA3O60609 AC027290.2-201ENST00000623210 18662 ntBASIC3.93□□□□□ -1.78
GFRA3O60609 RNU6-1210P-201ENST00000363775 107 ntBASIC3.93□□□□□ -1.78
GFRA3O60609 TRDJ2-201ENST00000390475 54 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
GFRA3O60609 MIR1251-201ENST00000408552 70 ntBASIC3.93□□□□□ -1.78
GFRA3O60609 RNA5SP296-201ENST00000410523 111 ntBASIC3.93□□□□□ -1.78
GFRA3O60609 TOMM22P1-201ENST00000418578 312 ntBASIC3.93□□□□□ -1.78
GFRA3O60609 AL445685.2-201ENST00000422551 342 ntBASIC3.93□□□□□ -1.78
GFRA3O60609 AL161651.1-201ENST00000440882 223 ntBASIC3.93□□□□□ -1.78
GFRA3O60609 RNU7-14P-201ENST00000459331 62 ntBASIC3.93□□□□□ -1.78
GFRA3O60609 RPS29P21-201ENST00000496272 170 ntBASIC3.93□□□□□ -1.78
GFRA3O60609 AP003484.1-201ENST00000530974 250 ntBASIC3.93□□□□□ -1.78
GFRA3O60609 AC015912.2-201ENST00000571053 181 ntBASIC3.93□□□□□ -1.78
GFRA3O60609 AL160290.3-201ENST00000604869 165 ntBASIC3.93□□□□□ -1.78
GFRA3O60609 AC020891.4-201ENST00000605745 93 ntBASIC3.93□□□□□ -1.78
GFRA3O60609 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
GFRA3O60609 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.93□□□□□ -1.78
GFRA3O60609 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
GFRA3O60609 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
GFRA3O60609 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
GFRA3O60609 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
GFRA3O60609 LINC01355-201ENST00000566551 5444 ntBASIC3.92□□□□□ -1.78
GFRA3O60609 SNORD115-2-201ENST00000362842 82 ntBASIC3.92□□□□□ -1.78
GFRA3O60609 Y_RNA.171-201ENST00000363760 102 ntBASIC3.92□□□□□ -1.78
GFRA3O60609 SNORD115-20-201ENST00000365099 82 ntBASIC3.92□□□□□ -1.78
GFRA3O60609 MIR520G-201ENST00000385064 90 ntBASIC3.92□□□□□ -1.78
GFRA3O60609 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC3.92□□□□□ -1.78
GFRA3O60609 RPS26P2-201ENST00000440331 348 ntBASIC3.92□□□□□ -1.78
GFRA3O60609 AC093423.1-201ENST00000440817 142 ntBASIC3.92□□□□□ -1.78
GFRA3O60609 RPL36AP48-201ENST00000485521 314 ntBASIC3.92□□□□□ -1.78
GFRA3O60609 RNA5SP179-201ENST00000517284 121 ntBASIC3.92□□□□□ -1.78
GFRA3O60609 IGHVIII-5-1-201ENST00000523059 99 ntBASIC3.92□□□□□ -1.78
GFRA3O60609 AL513043.2-201ENST00000573941 143 ntBASIC3.92□□□□□ -1.78
GFRA3O60609 AC091905.2-201ENST00000623143 306 ntBASIC3.92□□□□□ -1.78
GFRA3O60609 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
GFRA3O60609 AC010733.2-201ENST00000589496 5702 ntBASIC3.92□□□□□ -1.78
GFRA3O60609 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
GFRA3O60609 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.92□□□□□ -1.78
GFRA3O60609 BBX-203ENST00000402543 3980 ntTSL 5 BASIC3.92□□□□□ -1.78
GFRA3O60609 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
GFRA3O60609 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
GFRA3O60609 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
GFRA3O60609 AC068254.2-201ENST00000623938 3577 ntBASIC3.91□□□□□ -1.78
GFRA3O60609 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
GFRA3O60609 MAPK10-286ENST00000641208 8747 ntBASIC3.91□□□□□ -1.78
GFRA3O60609 SNORD38.1-201ENST00000363863 68 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms