Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AL390123.1-201ENST00000603216 237 ntBASIC0.92□□□□□ -2.26
CHMP2AO43633 SNRPGP20-201ENST00000604477 205 ntBASIC0.92□□□□□ -2.26
CHMP2AO43633 AL138726.1-201ENST00000614873 333 ntBASIC0.92□□□□□ -2.26
CHMP2AO43633 AC009248.2-201ENST00000619826 254 ntBASIC0.92□□□□□ -2.26
CHMP2AO43633 AC006504.8-201ENST00000621046 635 ntBASIC0.92□□□□□ -2.26
CHMP2AO43633 Y_RNA.48-201ENST00000362710 103 ntBASIC0.91□□□□□ -2.26
CHMP2AO43633 Y_RNA.100-201ENST00000363141 102 ntBASIC0.91□□□□□ -2.26
CHMP2AO43633 MIR548J-201ENST00000408833 112 ntBASIC0.91□□□□□ -2.26
CHMP2AO43633 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC0.91□□□□□ -2.26
CHMP2AO43633 AL353572.1-201ENST00000442490 417 ntBASIC0.91□□□□□ -2.26
CHMP2AO43633 RNU6-221P-201ENST00000459541 99 ntBASIC0.91□□□□□ -2.26
CHMP2AO43633 AC092991.1-201ENST00000477176 376 ntBASIC0.91□□□□□ -2.26
CHMP2AO43633 DEFB108E-201ENST00000524692 240 ntBASIC0.91□□□□□ -2.26
CHMP2AO43633 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC0.91□□□□□ -2.26
CHMP2AO43633 AL078603.1-201ENST00000603824 313 ntBASIC0.91□□□□□ -2.26
CHMP2AO43633 Six3os1_7.1-201ENST00000621512 201 ntBASIC0.91□□□□□ -2.26
CHMP2AO43633 AC024614.3-201ENST00000637860 256 ntBASIC0.91□□□□□ -2.26
CHMP2AO43633 Y_RNA.212-201ENST00000364177 102 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 RNU6-1042P-201ENST00000384204 107 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 Y_RNA.473-201ENST00000384333 102 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 Y_RNA.481-201ENST00000384373 102 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 Y_RNA.533-201ENST00000384596 114 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 RNU6-1031P-201ENST00000384773 107 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC0.9□□□□□ -2.27
CHMP2AO43633 NDUFA5P4-201ENST00000436704 385 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 SEPT14P3-201ENST00000439401 183 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC0.9□□□□□ -2.27
CHMP2AO43633 AL732372.2-207ENST00000445840 183 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 SEPT14P2-201ENST00000453405 183 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 SEPT14P4-201ENST00000513445 186 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 SCARNA16.2-201ENST00000516520 172 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 RNU6-344P-201ENST00000516635 111 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 RNU6-256P-201ENST00000516747 97 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 SNORA70.22-201ENST00000517160 124 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 FO082796.1-201ENST00000523795 183 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.9□□□□□ -2.27
CHMP2AO43633 AC136932.1-201ENST00000574771 208 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 MIR4778-201ENST00000577635 80 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 PIGPP4-201ENST00000584447 307 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 AC013244.2-201ENST00000603396 103 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 AL021879.1-201ENST00000611756 288 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 MIR8054-201ENST00000620877 86 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 AC090617.10-201ENST00000624308 134 ntBASIC0.9□□□□□ -2.27
CHMP2AO43633 RNU6-222P-201ENST00000362438 107 ntBASIC0.89□□□□□ -2.27
CHMP2AO43633 Y_RNA.116-201ENST00000363292 103 ntBASIC0.89□□□□□ -2.27
CHMP2AO43633 Y_RNA.319-201ENST00000365138 92 ntBASIC0.89□□□□□ -2.27
CHMP2AO43633 RNU6-1240P-201ENST00000365155 104 ntBASIC0.89□□□□□ -2.27
CHMP2AO43633 Y_RNA.559-201ENST00000384686 107 ntBASIC0.89□□□□□ -2.27
CHMP2AO43633 RNU2-16P-201ENST00000410712 136 ntBASIC0.89□□□□□ -2.27
CHMP2AO43633 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.89□□□□□ -2.27
CHMP2AO43633 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.89□□□□□ -2.27
CHMP2AO43633 TRBVA-201ENST00000498804 316 ntBASIC0.89□□□□□ -2.27
CHMP2AO43633 Y_RNA.673-201ENST00000516306 88 ntBASIC0.89□□□□□ -2.27
CHMP2AO43633 AC091144.1-201ENST00000519573 138 ntBASIC0.89□□□□□ -2.27
CHMP2AO43633 AC023157.2-201ENST00000540596 141 ntBASIC0.89□□□□□ -2.27
CHMP2AO43633 POLR3GP2-201ENST00000588366 668 ntBASIC0.89□□□□□ -2.27
CHMP2AO43633 AL162413.1-201ENST00000603198 110 ntBASIC0.89□□□□□ -2.27
CHMP2AO43633 SNORD11B-201ENST00000607707 90 ntBASIC0.89□□□□□ -2.27
CHMP2AO43633 MIR6788-201ENST00000618842 66 ntBASIC0.89□□□□□ -2.27
CHMP2AO43633 RNU6-1123P-201ENST00000362347 106 ntBASIC0.88□□□□□ -2.27
CHMP2AO43633 RNU6-137P-201ENST00000363680 108 ntBASIC0.88□□□□□ -2.27
CHMP2AO43633 RNY3P3-201ENST00000363816 102 ntBASIC0.88□□□□□ -2.27
CHMP2AO43633 Y_RNA.554-201ENST00000384672 102 ntBASIC0.88□□□□□ -2.27
CHMP2AO43633 MIR1185-2-201ENST00000408687 86 ntBASIC0.88□□□□□ -2.27
CHMP2AO43633 AC245047.3-201ENST00000429428 127 ntBASIC0.88□□□□□ -2.27
CHMP2AO43633 MTND2P22-201ENST00000444325 1033 ntBASIC0.88□□□□□ -2.27
CHMP2AO43633 AP000870.1-201ENST00000472927 406 ntBASIC0.88□□□□□ -2.27
CHMP2AO43633 RNU1-142P-201ENST00000516682 145 ntBASIC0.88□□□□□ -2.27
CHMP2AO43633 RNU6-922P-201ENST00000516753 99 ntBASIC0.88□□□□□ -2.27
CHMP2AO43633 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.88□□□□□ -2.27
CHMP2AO43633 CYP3A137P-201ENST00000562436 69 ntBASIC0.88□□□□□ -2.27
CHMP2AO43633 MIR151B-201ENST00000584249 96 ntBASIC0.88□□□□□ -2.27
CHMP2AO43633 AC108706.1-201ENST00000611053 297 ntBASIC0.88□□□□□ -2.27
CHMP2AO43633 DISC2.1-201ENST00000612827 205 ntBASIC0.88□□□□□ -2.27
CHMP2AO43633 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC0.88□□□□□ -2.27
CHMP2AO43633 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.87□□□□□ -2.27
CHMP2AO43633 Y_RNA.135-201ENST00000363439 95 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 RNU4-9P-201ENST00000364951 139 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 SNORA72.2-201ENST00000365028 127 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 RNU6-505P-201ENST00000384427 107 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 Y_RNA.517-201ENST00000384551 106 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.87□□□□□ -2.27
CHMP2AO43633 RNU6-440P-201ENST00000390882 105 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 AC016907.1-201ENST00000419483 435 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 ZNF885P-201ENST00000420174 1098 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC0.87□□□□□ -2.27
CHMP2AO43633 AL589823.1-201ENST00000429577 183 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 MTATP6P13-201ENST00000438531 667 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 RNU6-314P-201ENST00000516574 104 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 RNU6-1088P-201ENST00000516850 104 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 AC245008.1-201ENST00000608123 476 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 AC019193.3-201ENST00000609144 554 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 AL359075.3-201ENST00000613288 217 ntBASIC0.87□□□□□ -2.27
CHMP2AO43633 TTK-211ENST00000627129 240 ntTSL 5 BASIC0.87□□□□□ -2.27
CHMP2AO43633 SNORD115-8-201ENST00000363856 82 ntBASIC0.86□□□□□ -2.27
CHMP2AO43633 SNORD115-38-201ENST00000365037 82 ntBASIC0.86□□□□□ -2.27
CHMP2AO43633 RNY1P14-201ENST00000384426 108 ntBASIC0.86□□□□□ -2.27
CHMP2AO43633 MIR10B-201ENST00000385011 110 ntBASIC0.86□□□□□ -2.27
CHMP2AO43633 RNU6-910P-201ENST00000390844 107 ntBASIC0.86□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms