Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RNU6-373P-201ENST00000411247 98 ntBASIC1.44□□□□□ -2.18
CUX2O14529 AC069257.2-201ENST00000441819 155 ntBASIC1.44□□□□□ -2.18
CUX2O14529 RPS20P10-201ENST00000451209 253 ntBASIC1.44□□□□□ -2.18
CUX2O14529 RPL26P26-201ENST00000480251 434 ntBASIC1.44□□□□□ -2.18
CUX2O14529 AF186996.7-201ENST00000492781 209 ntBASIC1.44□□□□□ -2.18
CUX2O14529 RNU6-856P-201ENST00000516959 98 ntBASIC1.44□□□□□ -2.18
CUX2O14529 MIR4273-201ENST00000582824 84 ntBASIC1.44□□□□□ -2.18
CUX2O14529 MIR3672-201ENST00000584290 82 ntBASIC1.44□□□□□ -2.18
CUX2O14529 TEX41-243ENST00000614173 190 ntTSL 5 BASIC1.44□□□□□ -2.18
CUX2O14529 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.44□□□□□ -2.18
CUX2O14529 AC067863.3-201ENST00000624172 122 ntBASIC1.44□□□□□ -2.18
CUX2O14529 Y_RNA.41-201ENST00000362646 102 ntBASIC1.43□□□□□ -2.18
CUX2O14529 SNORD1A-201ENST00000364968 72 ntBASIC1.43□□□□□ -2.18
CUX2O14529 MIR181A1-201ENST00000385026 110 ntBASIC1.43□□□□□ -2.18
CUX2O14529 AC016907.1-201ENST00000419483 435 ntBASIC1.43□□□□□ -2.18
CUX2O14529 MTND1P11-201ENST00000456661 876 ntBASIC1.43□□□□□ -2.18
CUX2O14529 SNORA77B-201ENST00000578179 125 ntBASIC1.43□□□□□ -2.18
CUX2O14529 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.43□□□□□ -2.18
CUX2O14529 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.43□□□□□ -2.18
CUX2O14529 AC024614.3-201ENST00000637860 256 ntBASIC1.43□□□□□ -2.18
CUX2O14529 MIR6759-201ENST00000638110 65 ntBASIC1.43□□□□□ -2.18
CUX2O14529 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC1.43□□□□□ -2.18
CUX2O14529 SNORD50.1-201ENST00000362987 71 ntBASIC1.43□□□□□ -2.18
CUX2O14529 RNY3P3-201ENST00000363816 102 ntBASIC1.43□□□□□ -2.18
CUX2O14529 RNU6-417P-201ENST00000384712 107 ntBASIC1.43□□□□□ -2.18
CUX2O14529 MIR586-201ENST00000385035 97 ntBASIC1.43□□□□□ -2.18
CUX2O14529 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
CUX2O14529 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC1.43□□□□□ -2.18
CUX2O14529 SNORA25.14-201ENST00000516481 132 ntBASIC1.43□□□□□ -2.18
CUX2O14529 RNU6-256P-201ENST00000516747 97 ntBASIC1.43□□□□□ -2.18
CUX2O14529 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.43□□□□□ -2.18
CUX2O14529 AP001485.1-201ENST00000604799 199 ntBASIC1.43□□□□□ -2.18
CUX2O14529 AC015540.1-201ENST00000615828 501 ntBASIC1.43□□□□□ -2.18
CUX2O14529 MIR8063-201ENST00000621930 81 ntBASIC1.43□□□□□ -2.18
CUX2O14529 Y_RNA.9-201ENST00000362354 101 ntBASIC1.42□□□□□ -2.18
CUX2O14529 Y_RNA.100-201ENST00000363141 102 ntBASIC1.42□□□□□ -2.18
CUX2O14529 RNU4-24P-201ENST00000364565 139 ntBASIC1.42□□□□□ -2.18
CUX2O14529 RNU4-75P-201ENST00000364621 146 ntBASIC1.42□□□□□ -2.18
CUX2O14529 RNU4-9P-201ENST00000364951 139 ntBASIC1.42□□□□□ -2.18
CUX2O14529 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.42□□□□□ -2.18
CUX2O14529 COX6CP10-201ENST00000416832 224 ntBASIC1.42□□□□□ -2.18
CUX2O14529 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC1.42□□□□□ -2.18
CUX2O14529 AC245047.4-201ENST00000433189 144 ntBASIC1.42□□□□□ -2.18
CUX2O14529 AC079140.2-201ENST00000506193 142 ntBASIC1.42□□□□□ -2.18
CUX2O14529 AC103851.1-201ENST00000506833 274 ntBASIC1.42□□□□□ -2.18
CUX2O14529 Y_RNA.665-201ENST00000516177 98 ntBASIC1.42□□□□□ -2.18
CUX2O14529 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.42□□□□□ -2.18
CUX2O14529 AP003465.2-201ENST00000602571 373 ntBASIC1.42□□□□□ -2.18
CUX2O14529 AL138726.1-201ENST00000614873 333 ntBASIC1.42□□□□□ -2.18
CUX2O14529 AL078596.1-201ENST00000624856 447 ntBASIC1.42□□□□□ -2.18
CUX2O14529 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.42□□□□□ -2.18
CUX2O14529 SCARNA4-201ENST00000629045 128 ntBASIC1.42□□□□□ -2.18
CUX2O14529 AC073544.1-201ENST00000600110 1595 ntBASIC1.41□□□□□ -2.18
CUX2O14529 SNORD116-11-201ENST00000383882 92 ntBASIC1.41□□□□□ -2.18
CUX2O14529 RNU6-338P-201ENST00000383888 105 ntBASIC1.41□□□□□ -2.18
CUX2O14529 MIR517A-201ENST00000385001 87 ntBASIC1.41□□□□□ -2.18
CUX2O14529 AL117342.1-201ENST00000404861 406 ntBASIC1.41□□□□□ -2.18
CUX2O14529 RNU6-57P-201ENST00000411348 103 ntBASIC1.41□□□□□ -2.18
CUX2O14529 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC1.41□□□□□ -2.18
CUX2O14529 HMGN2P9-201ENST00000476875 229 ntBASIC1.41□□□□□ -2.18
CUX2O14529 RNU6-344P-201ENST00000516635 111 ntBASIC1.41□□□□□ -2.18
CUX2O14529 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.41□□□□□ -2.18
CUX2O14529 AC243829.3-201ENST00000622177 108 ntBASIC1.41□□□□□ -2.18
CUX2O14529 AC009033.1-201ENST00000624279 431 ntBASIC1.41□□□□□ -2.18
CUX2O14529 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC1.41□□□□□ -2.18
CUX2O14529 RNA5SP347-201ENST00000362445 119 ntBASIC1.4□□□□□ -2.19
CUX2O14529 Y_RNA.256-201ENST00000364594 104 ntBASIC1.4□□□□□ -2.19
CUX2O14529 RNU6-1240P-201ENST00000365155 104 ntBASIC1.4□□□□□ -2.19
CUX2O14529 RNU6-95P-201ENST00000384697 107 ntBASIC1.4□□□□□ -2.19
CUX2O14529 MIR508-201ENST00000384857 115 ntBASIC1.4□□□□□ -2.19
CUX2O14529 RNA5SP323-201ENST00000391094 133 ntBASIC1.4□□□□□ -2.19
CUX2O14529 RNA5SP25-201ENST00000410815 110 ntBASIC1.4□□□□□ -2.19
CUX2O14529 AL590632.1-201ENST00000424289 371 ntBASIC1.4□□□□□ -2.19
CUX2O14529 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.4□□□□□ -2.19
CUX2O14529 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.4□□□□□ -2.19
CUX2O14529 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.4□□□□□ -2.19
CUX2O14529 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC1.4□□□□□ -2.19
CUX2O14529 AC124303.1-201ENST00000605703 360 ntBASIC1.4□□□□□ -2.19
CUX2O14529 AC080013.6-201ENST00000606185 215 ntBASIC1.4□□□□□ -2.19
CUX2O14529 AC006001.4-201ENST00000622243 395 ntBASIC1.4□□□□□ -2.19
CUX2O14529 SNORD33-201ENST00000362761 85 ntBASIC1.39□□□□□ -2.19
CUX2O14529 RNU6-623P-201ENST00000363143 105 ntBASIC1.39□□□□□ -2.19
CUX2O14529 RNU6-1090P-201ENST00000364065 94 ntBASIC1.39□□□□□ -2.19
CUX2O14529 RNU6-245P-201ENST00000384020 107 ntBASIC1.39□□□□□ -2.19
CUX2O14529 Y_RNA.573-201ENST00000384763 105 ntBASIC1.39□□□□□ -2.19
CUX2O14529 MIR1912-201ENST00000410389 80 ntBASIC1.39□□□□□ -2.19
CUX2O14529 AC004866.1-201ENST00000411748 78 ntBASIC1.39□□□□□ -2.19
CUX2O14529 SDAD1P3-201ENST00000427380 333 ntBASIC1.39□□□□□ -2.19
CUX2O14529 HMGN2P34-201ENST00000437647 269 ntBASIC1.39□□□□□ -2.19
CUX2O14529 MTCO3P18-201ENST00000440206 761 ntBASIC1.39□□□□□ -2.19
CUX2O14529 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC1.39□□□□□ -2.19
CUX2O14529 MTCO2P7-201ENST00000446518 666 ntBASIC1.39□□□□□ -2.19
CUX2O14529 RNU1-142P-201ENST00000516682 145 ntBASIC1.39□□□□□ -2.19
CUX2O14529 RNU1-117P-201ENST00000517041 158 ntBASIC1.39□□□□□ -2.19
CUX2O14529 RNU6-58P-201ENST00000517143 103 ntBASIC1.39□□□□□ -2.19
CUX2O14529 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.39□□□□□ -2.19
CUX2O14529 AC012557.2-201ENST00000605919 418 ntBASIC1.39□□□□□ -2.19
CUX2O14529 AL353149.1-201ENST00000610667 244 ntBASIC1.39□□□□□ -2.19
CUX2O14529 RNY4P14-201ENST00000363656 96 ntBASIC1.38□□□□□ -2.19
CUX2O14529 SNORA63D-201ENST00000364359 132 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms