Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 Y_RNA.597-201ENST00000410463 100 ntBASIC2.68□□□□□ -1.98
TRIM38O00635 SNORD2.1-201ENST00000458762 69 ntBASIC2.68□□□□□ -1.98
TRIM38O00635 AC091959.1-201ENST00000495857 238 ntBASIC2.68□□□□□ -1.98
TRIM38O00635 Y_RNA.679-201ENST00000516416 91 ntBASIC2.68□□□□□ -1.98
TRIM38O00635 AC022616.8-201ENST00000533569 253 ntBASIC2.68□□□□□ -1.98
TRIM38O00635 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.68□□□□□ -1.98
TRIM38O00635 RPL21P9-201ENST00000556149 474 ntBASIC2.68□□□□□ -1.98
TRIM38O00635 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC2.68□□□□□ -1.98
TRIM38O00635 AL356575.1-201ENST00000603008 283 ntBASIC2.68□□□□□ -1.98
TRIM38O00635 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC2.68□□□□□ -1.98
TRIM38O00635 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC2.68□□□□□ -1.98
TRIM38O00635 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.68□□□□□ -1.98
TRIM38O00635 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC2.67□□□□□ -1.98
TRIM38O00635 UBE2WP1-201ENST00000362030 340 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 SNORA25.1-201ENST00000362326 128 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 RNU1-23P-201ENST00000363361 144 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 RNU6-944P-201ENST00000364023 107 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 Y_RNA.308-201ENST00000365043 101 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 RNU6-546P-201ENST00000383991 107 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 Y_RNA.435-201ENST00000384095 112 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 Y_RNA.441-201ENST00000384123 112 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 RNU6-1289P-201ENST00000384431 106 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 SNORA22C-201ENST00000384614 134 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 RNU6-131P-201ENST00000391144 107 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 MIR1261-201ENST00000408659 82 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 MTCO1P5-201ENST00000433573 344 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 AL513328.1-201ENST00000446460 224 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC2.67□□□□□ -1.98
TRIM38O00635 snoU13.6-201ENST00000458785 104 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 AP000870.1-201ENST00000472927 406 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 TRBV12-1-201ENST00000479785 344 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC2.67□□□□□ -1.98
TRIM38O00635 RNU6-479P-201ENST00000516348 105 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 AC108706.1-201ENST00000611053 297 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 MIR6817-201ENST00000615588 66 ntBASIC2.67□□□□□ -1.98
TRIM38O00635 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
TRIM38O00635 KTN1-203ENST00000395309 4021 ntAPPRIS ALT2 TSL 5 BASIC2.66□□□□□ -1.98
TRIM38O00635 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM38O00635 RNU6-137P-201ENST00000363680 108 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 SNORD115-8-201ENST00000363856 82 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 SNORA25.6-201ENST00000364121 118 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 RNU6-879P-201ENST00000364328 108 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 SNORD115-38-201ENST00000365037 82 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 MIR153-2-201ENST00000385225 87 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 SNORD12B-201ENST00000410433 91 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 RPL23AP36-201ENST00000413895 458 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 AC009238.1-201ENST00000442165 424 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 AC009237.6-201ENST00000446969 424 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 AC009237.7-201ENST00000447357 229 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 MRPS10P1-201ENST00000448483 130 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM38O00635 RPL23AP3-201ENST00000453844 468 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.66□□□□□ -1.98
TRIM38O00635 RNA5SP148-201ENST00000516527 94 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 RNU7-110P-201ENST00000516891 62 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 AK6P2-201ENST00000549020 471 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 ZNF861P-201ENST00000588126 639 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC2.66□□□□□ -1.98
TRIM38O00635 AL365222.1-201ENST00000614661 98 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 Z82195.2-201ENST00000612348 18351 ntBASIC2.66□□□□□ -1.98
TRIM38O00635 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.66□□□□□ -1.98
TRIM38O00635 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.98
TRIM38O00635 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.65□□□□□ -1.98
TRIM38O00635 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
TRIM38O00635 SNORD116-18-201ENST00000383961 92 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 U8.10-201ENST00000384260 133 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 RNU6-21P-201ENST00000384710 107 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 MIR32-201ENST00000384965 70 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 RNU6-1168P-201ENST00000390831 104 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 RNU6-1154P-201ENST00000391001 104 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 RNU1-139P-201ENST00000391307 165 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 MIR1294-201ENST00000408503 142 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 RNU2-32P-201ENST00000411193 191 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 UQCRBP2-201ENST00000447827 297 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 AC007215.1-201ENST00000464893 276 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 AC096725.1-201ENST00000514266 313 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 SNORA27.4-201ENST00000516650 95 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 RNU6-1198P-201ENST00000516904 67 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.65□□□□□ -1.99
TRIM38O00635 AC104984.5-201ENST00000586878 94 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 AC037487.3-201ENST00000606668 112 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 MIR6715A-201ENST00000615929 79 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC2.65□□□□□ -1.99
TRIM38O00635 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM38O00635 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM38O00635 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
TRIM38O00635 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
TRIM38O00635 MIR410-201ENST00000362222 80 ntBASIC2.64□□□□□ -1.99
TRIM38O00635 RNU6-961P-201ENST00000363893 105 ntBASIC2.64□□□□□ -1.99
TRIM38O00635 Y_RNA.272-201ENST00000364696 102 ntBASIC2.64□□□□□ -1.99
TRIM38O00635 SNORA25B-201ENST00000365507 128 ntBASIC2.64□□□□□ -1.99
TRIM38O00635 DEFA7P-201ENST00000382676 285 ntBASIC2.64□□□□□ -1.99
TRIM38O00635 Y_RNA.568-201ENST00000384742 113 ntBASIC2.64□□□□□ -1.99
TRIM38O00635 Y_RNA.570-201ENST00000384750 101 ntBASIC2.64□□□□□ -1.99
TRIM38O00635 Y_RNA.580-201ENST00000391004 95 ntBASIC2.64□□□□□ -1.99
TRIM38O00635 RNU5A-5P-201ENST00000411054 116 ntBASIC2.64□□□□□ -1.99
TRIM38O00635 IFNA11P-201ENST00000446352 526 ntBASIC2.64□□□□□ -1.99
TRIM38O00635 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.64□□□□□ -1.99
TRIM38O00635 TRAPPC2P7-201ENST00000509650 231 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms