Protein–RNA interactions for Protein: O00273

DFFA, DNA fragmentation factor subunit alpha, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DFFAO00273 MRPS10P1-201ENST00000448483 130 ntBASIC0.64□□□□□ -2.31
DFFAO00273 RPL39P39-201ENST00000455840 151 ntBASIC0.64□□□□□ -2.31
DFFAO00273 AC136628.3-201ENST00000521868 290 ntBASIC0.64□□□□□ -2.31
DFFAO00273 APOOP3-201ENST00000536787 586 ntBASIC0.64□□□□□ -2.31
DFFAO00273 AC026371.1-201ENST00000551867 419 ntBASIC0.64□□□□□ -2.31
DFFAO00273 MIR151B-201ENST00000584249 96 ntBASIC0.64□□□□□ -2.31
DFFAO00273 AL158063.1-201ENST00000615349 536 ntBASIC0.64□□□□□ -2.31
DFFAO00273 RNU6-727P-201ENST00000363592 107 ntBASIC0.63□□□□□ -2.31
DFFAO00273 Y_RNA.226-201ENST00000364337 114 ntBASIC0.63□□□□□ -2.31
DFFAO00273 SNORA2.2-201ENST00000365473 135 ntBASIC0.63□□□□□ -2.31
DFFAO00273 AL353572.1-201ENST00000442490 417 ntBASIC0.63□□□□□ -2.31
DFFAO00273 RNU7-187P-201ENST00000458985 68 ntBASIC0.63□□□□□ -2.31
DFFAO00273 RN7SKP298-201ENST00000515950 94 ntBASIC0.63□□□□□ -2.31
DFFAO00273 AC104383.1-201ENST00000530297 370 ntBASIC0.63□□□□□ -2.31
DFFAO00273 AC007834.2-201ENST00000536310 343 ntBASIC0.63□□□□□ -2.31
DFFAO00273 AC027288.2-201ENST00000553028 243 ntBASIC0.63□□□□□ -2.31
DFFAO00273 AC006504.8-201ENST00000621046 635 ntBASIC0.63□□□□□ -2.31
DFFAO00273 Z69908.1-201ENST00000622603 247 ntBASIC0.63□□□□□ -2.31
DFFAO00273 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC0.62□□□□□ -2.31
DFFAO00273 Y_RNA.100-201ENST00000363141 102 ntBASIC0.62□□□□□ -2.31
DFFAO00273 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
DFFAO00273 SNORA69-201ENST00000383895 132 ntBASIC0.62□□□□□ -2.31
DFFAO00273 MIR153-2-201ENST00000385225 87 ntBASIC0.62□□□□□ -2.31
DFFAO00273 U8.16-201ENST00000391279 133 ntBASIC0.62□□□□□ -2.31
DFFAO00273 CALM2P3-201ENST00000400429 449 ntBASIC0.62□□□□□ -2.31
DFFAO00273 MIR1287-201ENST00000408492 90 ntBASIC0.62□□□□□ -2.31
DFFAO00273 MTCO3P18-201ENST00000440206 761 ntBASIC0.62□□□□□ -2.31
DFFAO00273 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.62□□□□□ -2.31
DFFAO00273 MTND3P16-201ENST00000452205 344 ntBASIC0.62□□□□□ -2.31
DFFAO00273 RNU6-956P-201ENST00000458868 103 ntBASIC0.62□□□□□ -2.31
DFFAO00273 SNORD65B-201ENST00000459126 73 ntBASIC0.62□□□□□ -2.31
DFFAO00273 AC091179.3-201ENST00000474761 144 ntBASIC0.62□□□□□ -2.31
DFFAO00273 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.62□□□□□ -2.31
DFFAO00273 RNA5SP255-201ENST00000516370 107 ntBASIC0.62□□□□□ -2.31
DFFAO00273 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC0.62□□□□□ -2.31
DFFAO00273 AL078603.1-201ENST00000603824 313 ntBASIC0.62□□□□□ -2.31
DFFAO00273 AL158209.2-201ENST00000619266 216 ntBASIC0.62□□□□□ -2.31
DFFAO00273 AC023510.2-201ENST00000622162 746 ntBASIC0.62□□□□□ -2.31
DFFAO00273 AC006435.5-201ENST00000624486 112 ntBASIC0.62□□□□□ -2.31
DFFAO00273 MIR6079-201ENST00000635807 62 ntBASIC0.62□□□□□ -2.31
DFFAO00273 RNU6-137P-201ENST00000363680 108 ntBASIC0.61□□□□□ -2.31
DFFAO00273 RNU6-1322P-201ENST00000364309 107 ntBASIC0.61□□□□□ -2.31
DFFAO00273 AL445305.1-201ENST00000432577 575 ntBASIC0.61□□□□□ -2.31
DFFAO00273 MTND4P18-201ENST00000447010 465 ntBASIC0.61□□□□□ -2.31
DFFAO00273 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC0.61□□□□□ -2.31
DFFAO00273 RNU7-21P-201ENST00000459430 62 ntBASIC0.61□□□□□ -2.31
DFFAO00273 RPS27P22-201ENST00000478056 241 ntBASIC0.61□□□□□ -2.31
DFFAO00273 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC0.61□□□□□ -2.31
DFFAO00273 AC022493.2-201ENST00000506122 481 ntBASIC0.61□□□□□ -2.31
DFFAO00273 AC023157.2-201ENST00000540596 141 ntBASIC0.61□□□□□ -2.31
DFFAO00273 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.61□□□□□ -2.31
DFFAO00273 AC004817.2-201ENST00000561794 651 ntBASIC0.61□□□□□ -2.31
DFFAO00273 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC0.61□□□□□ -2.31
DFFAO00273 RNA5SP361-201ENST00000362686 118 ntBASIC0.6□□□□□ -2.31
DFFAO00273 RNU6-522P-201ENST00000364497 107 ntBASIC0.6□□□□□ -2.31
DFFAO00273 Y_RNA.265-201ENST00000364677 108 ntBASIC0.6□□□□□ -2.31
DFFAO00273 RNU6-128P-201ENST00000383976 107 ntBASIC0.6□□□□□ -2.31
DFFAO00273 RNU6-793P-201ENST00000384233 104 ntBASIC0.6□□□□□ -2.31
DFFAO00273 RNU6-790P-201ENST00000384479 105 ntBASIC0.6□□□□□ -2.31
DFFAO00273 MTCO2P7-201ENST00000446518 666 ntBASIC0.6□□□□□ -2.31
DFFAO00273 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC0.6□□□□□ -2.31
DFFAO00273 AC093850.1-201ENST00000454121 251 ntBASIC0.6□□□□□ -2.31
DFFAO00273 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.6□□□□□ -2.31
DFFAO00273 OR9P1P-201ENST00000496431 281 ntBASIC0.6□□□□□ -2.31
DFFAO00273 MTCO2P30-201ENST00000503662 364 ntBASIC0.6□□□□□ -2.31
DFFAO00273 AP002001.1-203ENST00000534002 267 ntBASIC0.6□□□□□ -2.31
DFFAO00273 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.6□□□□□ -2.31
DFFAO00273 RNU6-280P-201ENST00000364145 104 ntBASIC0.59□□□□□ -2.31
DFFAO00273 MIR92A1-201ENST00000385233 78 ntBASIC0.59□□□□□ -2.31
DFFAO00273 SNORA75.2-201ENST00000391138 150 ntBASIC0.59□□□□□ -2.31
DFFAO00273 SNORA75.3-201ENST00000391231 150 ntBASIC0.59□□□□□ -2.31
DFFAO00273 RNU6-648P-201ENST00000410190 107 ntBASIC0.59□□□□□ -2.31
DFFAO00273 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC0.59□□□□□ -2.31
DFFAO00273 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.59□□□□□ -2.31
DFFAO00273 RNU7-90P-201ENST00000459216 62 ntBASIC0.59□□□□□ -2.31
DFFAO00273 AC083904.1-201ENST00000487828 231 ntBASIC0.59□□□□□ -2.31
DFFAO00273 AC010469.2-201ENST00000496412 480 ntBASIC0.59□□□□□ -2.31
DFFAO00273 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.59□□□□□ -2.31
DFFAO00273 AC097462.1-201ENST00000514125 324 ntBASIC0.59□□□□□ -2.31
DFFAO00273 RNU7-28P-201ENST00000516759 62 ntBASIC0.59□□□□□ -2.31
DFFAO00273 RNU6-835P-201ENST00000516974 104 ntBASIC0.59□□□□□ -2.31
DFFAO00273 AC027419.1-201ENST00000522976 328 ntBASIC0.59□□□□□ -2.31
DFFAO00273 AL358937.1-201ENST00000524512 336 ntTSL 2 BASIC0.59□□□□□ -2.31
DFFAO00273 AP003484.1-201ENST00000530974 250 ntBASIC0.59□□□□□ -2.31
DFFAO00273 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.59□□□□□ -2.31
DFFAO00273 UBL5P4-201ENST00000562584 236 ntBASIC0.59□□□□□ -2.31
DFFAO00273 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC0.59□□□□□ -2.31
DFFAO00273 AC009248.2-201ENST00000619826 254 ntBASIC0.59□□□□□ -2.31
DFFAO00273 AC097520.1-201ENST00000624435 385 ntBASIC0.59□□□□□ -2.31
DFFAO00273 AC068137.4-201ENST00000638485 296 ntBASIC0.59□□□□□ -2.31
DFFAO00273 AC068700.1-201ENST00000565862 3754 ntBASIC0.58□□□□□ -2.32
DFFAO00273 Y_RNA.151-201ENST00000363566 112 ntBASIC0.58□□□□□ -2.32
DFFAO00273 RNU5F-3P-201ENST00000363767 117 ntBASIC0.58□□□□□ -2.32
DFFAO00273 Y_RNA.231-201ENST00000364358 102 ntBASIC0.58□□□□□ -2.32
DFFAO00273 SNORD116-13-201ENST00000384408 92 ntBASIC0.58□□□□□ -2.32
DFFAO00273 RNU6-541P-201ENST00000384709 110 ntBASIC0.58□□□□□ -2.32
DFFAO00273 Y_RNA.582-201ENST00000391023 95 ntBASIC0.58□□□□□ -2.32
DFFAO00273 RNU6-159P-201ENST00000391080 106 ntBASIC0.58□□□□□ -2.32
DFFAO00273 RNA5SP247-201ENST00000411181 105 ntBASIC0.58□□□□□ -2.32
DFFAO00273 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 153.9 ms