Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 MIR548A1-201ENST00000385041 97 ntBASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 MIR1302-4-201ENST00000408701 150 ntBASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 RNU6-710P-201ENST00000410424 105 ntBASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 AL158147.1-201ENST00000443970 75 ntBASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 RPL37P4-201ENST00000448908 268 ntBASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 AL031737.1-201ENST00000450125 223 ntBASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 RPS27P29-201ENST00000463110 252 ntBASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 RPS29P24-201ENST00000486345 171 ntBASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 Y_RNA.692-201ENST00000516627 105 ntBASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 AC120024.3-201ENST00000603167 156 ntBASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 SNRPGP20-201ENST00000604477 205 ntBASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 MIR6134-201ENST00000617606 109 ntBASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 AC007318.2-201ENST00000620999 243 ntBASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 AL035425.3-201ENST00000564206 4996 ntBASIC2.97□□□□□ -1.93
C1QTNF3-AMACRE9PGA6 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 RNU6-1164P-201ENST00000364428 107 ntBASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 Y_RNA.368-201ENST00000365547 113 ntBASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 MLLT10P1-201ENST00000418346 262 ntBASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 HSPE1P21-201ENST00000438283 308 ntBASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 SNORA31.8-201ENST00000516327 108 ntBASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC068657.1-201ENST00000520807 306 ntBASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 FTX_3.1-201ENST00000610451 147 ntBASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC012640.5-201ENST00000623897 319 ntBASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 SNORD98-201ENST00000636377 67 ntBASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 U2.21-201ENST00000637295 81 ntBASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 CENPCP1-201ENST00000533085 2578 ntBASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC108866.1-201ENST00000503073 2339 ntTSL 5 BASIC2.96□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 Y_RNA.114-201ENST00000363265 113 ntBASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 SNORA5B-201ENST00000363786 132 ntBASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 U3.9-201ENST00000363823 204 ntBASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 Y_RNA.310-201ENST00000365063 113 ntBASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 SNORA26.3-201ENST00000391119 136 ntBASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC099548.1-201ENST00000421443 426 ntBASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC092047.1-201ENST00000424997 240 ntBASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 RN7SL633P-201ENST00000488974 297 ntBASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC009163.5-201ENST00000575421 637 ntBASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC092435.3-201ENST00000565538 3654 ntBASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.95□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 Y_RNA.116-201ENST00000363292 103 ntBASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 SNORD45.3-201ENST00000363836 72 ntBASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 Y_RNA.456-201ENST00000384232 111 ntBASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 MIR493-201ENST00000385254 89 ntBASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC117454.1-201ENST00000491120 168 ntBASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 SNORA31.1-201ENST00000515993 133 ntBASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 SNORA31.5-201ENST00000516190 133 ntBASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 RNA5SP367-201ENST00000516557 118 ntBASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 CKS1BP7-201ENST00000522230 235 ntBASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 CYP4A27P-201ENST00000567218 190 ntBASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 ELOCP29-201ENST00000588193 334 ntBASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AL356575.1-201ENST00000603008 283 ntBASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC002076.2-201ENST00000617362 122 ntBASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 IL6ST-205ENST00000381294 2574 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC138915.1-201ENST00000565427 1685 ntBASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 CBX3P9-201ENST00000402326 552 ntBASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC004866.1-201ENST00000411748 78 ntBASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC027124.2-201ENST00000428249 105 ntBASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AL135938.1-201ENST00000443141 297 ntBASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 SNORA59A-201ENST00000459326 152 ntBASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 RPS29P20-201ENST00000489592 171 ntBASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 RN7SKP282-201ENST00000516824 299 ntBASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 AC022336.2-201ENST00000568966 2538 ntBASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 ADAM3A-203ENST00000461344 2157 ntBASIC2.93□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 MIR148B-201ENST00000362252 99 ntBASIC2.92□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 Y_RNA.243-201ENST00000364481 109 ntBASIC2.92□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 SNORD58C-201ENST00000365223 64 ntBASIC2.92□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 SNORA46-201ENST00000384762 135 ntBASIC2.92□□□□□ -1.94
C1QTNF3-AMACRE9PGA6 SNORA79-201ENST00000408376 140 ntBASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 189.7 ms