Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 Y_RNA.100-201ENST00000363141 102 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 RNU5E-10P-201ENST00000363506 118 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 Y_RNA.251-201ENST00000364551 99 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 RNU6V-201ENST00000384105 107 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 MIR329-2-201ENST00000385029 84 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 RNA5SP95-201ENST00000410319 137 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 RNU4-46P-201ENST00000410818 138 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 AC079140.5-201ENST00000507882 310 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 AP001372.4-201ENST00000524889 472 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 AGGF1P4-201ENST00000568249 801 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 SNORA25.18-201ENST00000607153 114 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 AL133173.2-201ENST00000614270 90 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 MIR2909-201ENST00000617113 69 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 AC139792.3-201ENST00000623525 224 ntBASIC-0.18□□□□□ -2.44
TRAV5A0A0B4J249 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-227P-201ENST00000362865 103 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 SNORD114-5-201ENST00000362928 70 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 SNORD87-201ENST00000364849 89 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-636P-201ENST00000384598 107 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-1106P-201ENST00000390845 107 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 RNA5SP482-201ENST00000391269 118 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 MIR1185-2-201ENST00000408687 86 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 ZNF885P-201ENST00000420174 1098 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 MTND3P9-201ENST00000429526 346 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 AC104850.1-201ENST00000435940 476 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 MTCO2P3-201ENST00000442543 421 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 AC091021.1-201ENST00000468051 388 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 MRPS36P4-201ENST00000534436 298 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 AC104408.1-201ENST00000605241 170 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 SNORD11B-201ENST00000607707 90 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 AC137590.2-201ENST00000619709 240 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 AC009878.1-201ENST00000621819 340 ntBASIC-0.19□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-1286P-201ENST00000383871 107 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-1029P-201ENST00000384109 107 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 MIR487A-201ENST00000385009 80 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-700P-201ENST00000391043 107 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 PDCL2P1-201ENST00000419302 352 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 AL353997.1-201ENST00000432936 108 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 MRPS10P1-201ENST00000448483 130 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 RPS29P15-201ENST00000458329 171 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 AC091133.4-201ENST00000511142 308 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-430P-201ENST00000517078 107 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 AC023442.1-201ENST00000531247 422 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 MIR548AO-201ENST00000579992 96 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 MIR4775-201ENST00000581168 75 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 BNIP3P39-201ENST00000601077 554 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 AC138749.5-201ENST00000611461 208 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 AC090517.2-201ENST00000614966 680 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 MTND4P4-201ENST00000439033 1366 ntBASIC-0.2□□□□□ -2.44
TRAV5A0A0B4J249 SNORA32.1-201ENST00000364514 115 ntBASIC-0.21□□□□□ -2.44
TRAV5A0A0B4J249 AL355143.1-201ENST00000407101 841 ntBASIC-0.21□□□□□ -2.44
TRAV5A0A0B4J249 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRAV5A0A0B4J249 SEPT7P4-201ENST00000437076 306 ntBASIC-0.21□□□□□ -2.44
TRAV5A0A0B4J249 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.21□□□□□ -2.44
TRAV5A0A0B4J249 RNU7-182P-201ENST00000459009 62 ntBASIC-0.21□□□□□ -2.44
TRAV5A0A0B4J249 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-410P-201ENST00000517006 107 ntBASIC-0.21□□□□□ -2.44
TRAV5A0A0B4J249 AC090572.1-201ENST00000519251 160 ntBASIC-0.21□□□□□ -2.44
TRAV5A0A0B4J249 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.21□□□□□ -2.44
TRAV5A0A0B4J249 AP002004.2-201ENST00000531656 154 ntBASIC-0.21□□□□□ -2.44
TRAV5A0A0B4J249 AC141557.1-201ENST00000540982 400 ntBASIC-0.21□□□□□ -2.44
TRAV5A0A0B4J249 RPL21P9-201ENST00000556149 474 ntBASIC-0.21□□□□□ -2.44
TRAV5A0A0B4J249 AC067863.3-201ENST00000624172 122 ntBASIC-0.21□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-369P-201ENST00000362515 102 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 Y_RNA.123-201ENST00000363338 102 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-833P-201ENST00000363486 107 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 RNA5SP48-201ENST00000363969 126 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-501P-201ENST00000364072 100 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-923P-201ENST00000364753 107 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 Y_RNA.412-201ENST00000384001 104 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-1127P-201ENST00000384580 107 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 SNORD73A-201ENST00000386062 65 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 RNA5SP496-201ENST00000391240 109 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 AL139396.1-201ENST00000421137 167 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 PIGPP3-201ENST00000425307 415 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 RNA5SP285-201ENST00000516619 119 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 RNU7-172P-201ENST00000517125 64 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 HIF1AP1-201ENST00000553642 175 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 AC112693.2-201ENST00000556538 232 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 AC027807.2-201ENST00000616099 408 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 AC104260.1-201ENST00000616660 539 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 SEPT14P19-203ENST00000633205 211 ntBASIC-0.22□□□□□ -2.44
TRAV5A0A0B4J249 SNORD118-201ENST00000363593 134 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 RNU6-1200P-201ENST00000384162 107 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 MIR562-201ENST00000384894 95 ntBASIC-0.23□□□□□ -2.45
TRAV5A0A0B4J249 MIR454-201ENST00000390180 115 ntBASIC-0.23□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms