Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 MIR487A-201ENST00000385009 80 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 AL049545.1-201ENST00000401856 572 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 RNA5SP222-201ENST00000411039 105 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 SNORD65B-201ENST00000459126 73 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 MTND2P14-201ENST00000482139 351 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 RNA5SP54-201ENST00000516951 92 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU1-117P-201ENST00000517041 158 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 AP001372.4-201ENST00000524889 472 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 AC036111.3-201ENST00000526389 112 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 AP003327.1-201ENST00000529684 127 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 SCOCP1-201ENST00000554676 349 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 AC091178.2-201ENST00000584401 117 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR4438-201ENST00000585271 93 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 AC023932.2-201ENST00000603176 175 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6-94P-201ENST00000607728 107 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 AC064836.2-201ENST00000609491 462 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 AC091925.1-201ENST00000623204 462 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 AC009161.2-201ENST00000624626 138 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.12□□□□□ -2.39
TRAV1-1A0A0B4J248 Y_RNA.123-201ENST00000363338 102 ntBASIC0.11□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6-833P-201ENST00000363486 107 ntBASIC0.11□□□□□ -2.39
TRAV1-1A0A0B4J248 Y_RNA.336-201ENST00000365307 109 ntBASIC0.11□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR562-201ENST00000384894 95 ntBASIC0.11□□□□□ -2.39
TRAV1-1A0A0B4J248 RNA5SP482-201ENST00000391269 118 ntBASIC0.11□□□□□ -2.39
TRAV1-1A0A0B4J248 RNA5SP127-201ENST00000411051 133 ntBASIC0.11□□□□□ -2.39
TRAV1-1A0A0B4J248 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.11□□□□□ -2.39
TRAV1-1A0A0B4J248 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV1-1A0A0B4J248 MRPS10P1-201ENST00000448483 130 ntBASIC0.11□□□□□ -2.39
TRAV1-1A0A0B4J248 U8.21-201ENST00000459536 136 ntBASIC0.11□□□□□ -2.39
TRAV1-1A0A0B4J248 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC0.11□□□□□ -2.39
TRAV1-1A0A0B4J248 AC010608.3-201ENST00000625048 527 ntBASIC0.11□□□□□ -2.39
TRAV1-1A0A0B4J248 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR103A2-201ENST00000362154 78 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR103A1-201ENST00000362165 78 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU4-67P-201ENST00000364569 141 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6-793P-201ENST00000384233 104 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 Y_RNA.476-201ENST00000384347 108 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR140-201ENST00000385282 100 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 SNORD111-201ENST00000408139 94 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR1827-201ENST00000408549 66 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 AL356010.1-201ENST00000456364 102 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 MTCO2P18-201ENST00000457151 658 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU7-180P-201ENST00000459240 63 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 HMGN2P26-201ENST00000463169 339 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 RPL23AP75-201ENST00000491601 451 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 SNORA14.1-201ENST00000516113 141 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6-311P-201ENST00000516224 102 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6-341P-201ENST00000516973 96 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 MTND1P35-201ENST00000526739 508 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR5583-1-201ENST00000580941 59 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 MIR548AB-201ENST00000584917 84 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 AC245014.2-201ENST00000603689 287 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 AC246785.4-201ENST00000605374 287 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 AC004223.4-201ENST00000612426 332 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 AP001506.1-201ENST00000615444 211 ntBASIC0.1□□□□□ -2.39
TRAV1-1A0A0B4J248 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.09□□□□□ -2.39
TRAV1-1A0A0B4J248 RNU6-222P-201ENST00000362438 107 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 SNORA1B-201ENST00000362535 133 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-1266P-201ENST00000362794 105 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 RNA5SP457-201ENST00000363657 124 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-1317P-201ENST00000364582 104 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 SNORD87-201ENST00000364849 89 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-282P-201ENST00000365357 103 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 SNORD105-201ENST00000386910 85 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 MTCO3P19-201ENST00000415864 321 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 AL358176.2-201ENST00000425769 204 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 OFD1P4Y-201ENST00000455273 1179 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 AC005178.1-201ENST00000508392 440 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 AC105313.1-201ENST00000509121 353 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 RN7SKP164-201ENST00000516138 266 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-58P-201ENST00000517143 103 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 MRPS36P3-201ENST00000519284 130 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 AF235103.2-201ENST00000525753 346 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 CPDP1-201ENST00000579660 283 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 AC100812.1-201ENST00000607622 580 ntBASIC0.09□□□□□ -2.4
TRAV1-1A0A0B4J248 SNORA25.3-201ENST00000363205 127 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 Y_RNA.115-201ENST00000363272 98 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU6-1329P-201ENST00000365664 107 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 MIR620-201ENST00000385232 95 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 RNA5SP63-201ENST00000391225 112 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 RNU2-70P-201ENST00000410718 179 ntBASIC0.08□□□□□ -2.4
TRAV1-1A0A0B4J248 AL593851.1-201ENST00000426171 157 ntBASIC0.08□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms