Protein–RNA interactions for Protein: A0A0B4J244

TRAV3, T-cell receptor alpha variable 3 (gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV3A0A0B4J244 SSR1P2-201ENST00000415208 787 ntBASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 UBE2D3P4-201ENST00000441973 436 ntBASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 MRPS10P1-201ENST00000448483 130 ntBASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 AC091133.4-201ENST00000511142 308 ntBASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 RNU11-2P-201ENST00000516898 142 ntBASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 SCOCP1-201ENST00000554676 349 ntBASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 MIR4768-201ENST00000585270 74 ntBASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 MIR4438-201ENST00000585271 93 ntBASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 AC100810.6-201ENST00000638068 285 ntBASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.07□□□□□ -2.4
TRAV3A0A0B4J244 AC005592.1-201ENST00000566527 1640 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 RNA5SP325-201ENST00000363756 130 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 Y_RNA.265-201ENST00000364677 108 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 Y_RNA.330-201ENST00000365230 109 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 RNY1P8-201ENST00000383970 114 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 RNU6-784P-201ENST00000384330 106 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 MIR32-201ENST00000384965 70 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 MIR513B-201ENST00000385136 84 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 SNORD73A-201ENST00000386062 65 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 CALM2P3-201ENST00000400429 449 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 AL049545.1-201ENST00000401856 572 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 RNA5SP222-201ENST00000411039 105 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 AL009048.1-201ENST00000450437 298 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 MTCO2P18-201ENST00000457151 658 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 HMGN2P26-201ENST00000463169 339 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 AF235103.2-201ENST00000525753 346 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 AL022161.1-201ENST00000604390 213 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 AP000240.1-201ENST00000609910 452 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 RMST_3.1-201ENST00000611651 109 ntBASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC0.06□□□□□ -2.4
TRAV3A0A0B4J244 ZNF204P-201ENST00000416749 2397 ntBASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 RNU6-1266P-201ENST00000362794 105 ntBASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 MIR450B-201ENST00000401182 78 ntBASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 MTCO3P19-201ENST00000415864 321 ntBASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 AC067940.1-201ENST00000458411 300 ntBASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 SNORD65B-201ENST00000459126 73 ntBASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 UBE2V1P12-201ENST00000503954 474 ntBASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 CYCTP-201ENST00000504253 315 ntBASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 U2.17-201ENST00000611454 95 ntBASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 OR5AK4P-201ENST00000635912 903 ntBASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 AC073544.1-201ENST00000600110 1595 ntBASIC0.05□□□□□ -2.4
TRAV3A0A0B4J244 RNU4-45P-201ENST00000365469 141 ntBASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 RNA5SP219-201ENST00000390940 113 ntBASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 Z99497.1-201ENST00000421282 135 ntBASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 MTND3P9-201ENST00000429526 346 ntBASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 AC005178.1-201ENST00000508392 440 ntBASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 AC097462.1-201ENST00000514125 324 ntBASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 RNU1-117P-201ENST00000517041 158 ntBASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 AL358944.1-201ENST00000528537 144 ntBASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 AP002004.2-201ENST00000531656 154 ntBASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 AC104695.3-201ENST00000604052 296 ntBASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 AC027279.3-201ENST00000625055 122 ntBASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 MIR371B-201ENST00000638082 66 ntBASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 AC068137.4-201ENST00000638485 296 ntBASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC0.04□□□□□ -2.4
TRAV3A0A0B4J244 SNORA1B-201ENST00000362535 133 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 SNORD44.1-201ENST00000363202 61 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 MIR573-201ENST00000384964 99 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 RNU6-903P-201ENST00000391270 109 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 Z98949.2-201ENST00000440996 144 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 AL392103.1-201ENST00000447000 198 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 AL356010.1-201ENST00000456364 102 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 U8.21-201ENST00000459536 136 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 HMGN1P10-201ENST00000474557 553 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 MTND2P14-201ENST00000482139 351 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 RNU6-58P-201ENST00000517143 103 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 CPDP1-201ENST00000579660 283 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 AC087683.1-201ENST00000591187 441 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 AC010620.1-201ENST00000601088 1102 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 RNU6-94P-201ENST00000607728 107 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 AC064836.2-201ENST00000609491 462 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 AC078938.1-201ENST00000620993 318 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 AL008636.1-201ENST00000625038 1018 ntBASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.03□□□□□ -2.4
TRAV3A0A0B4J244 SNORD113.3-201ENST00000364630 78 ntBASIC0.02□□□□□ -2.41
TRAV3A0A0B4J244 RNY4P34-201ENST00000364779 95 ntBASIC0.02□□□□□ -2.41
TRAV3A0A0B4J244 FGFR1OP2P1-201ENST00000395943 500 ntBASIC0.02□□□□□ -2.41
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms