Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 MIR4635-201ENST00000583759 79 ntBASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 AC091932.3-201ENST00000624223 323 ntBASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 MIR7157-201ENST00000635801 60 ntBASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 ANKRD30BP1-201ENST00000451052 2186 ntBASIC3.07□□□□□ -1.92
CTDP1Q9Y5B0 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 RNU4-15P-201ENST00000362613 141 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 Y_RNA.82-201ENST00000363000 102 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 Y_RNA.92-201ENST00000363043 102 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 RNU6-1210P-201ENST00000363775 107 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 U3.9-201ENST00000363823 204 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 Y_RNA.235-201ENST00000364412 102 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 Y_RNA.306-201ENST00000365015 102 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 Y_RNA.312-201ENST00000365089 102 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 Y_RNA.322-201ENST00000365151 102 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 RNU1-57P-201ENST00000384491 166 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 RNU4ATAC16P-201ENST00000408512 126 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 AC027124.2-201ENST00000428249 105 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 AL513328.1-201ENST00000446460 224 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 Y_RNA.650-201ENST00000459002 102 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 Y_RNA.638-201ENST00000459374 113 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 RN7SL429P-201ENST00000479090 223 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 RPL36AP48-201ENST00000485521 314 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 RN7SL489P-201ENST00000486185 223 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 RN7SL327P-201ENST00000488659 223 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 AC145146.1-201ENST00000496370 254 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 RNU6-155P-201ENST00000516347 100 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 RNU6-966P-201ENST00000516479 104 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 RNU6-826P-201ENST00000516827 104 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 Y_RNA.777-201ENST00000516982 102 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 MIR4282-201ENST00000583613 67 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 Y_RNA.771-201ENST00000598668 102 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 RN7SL853P-201ENST00000617250 223 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 Y_RNA.789-201ENST00000622480 102 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 MIR3674-201ENST00000636576 68 ntBASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
CTDP1Q9Y5B0 IL33-202ENST00000417746 2327 ntTSL 2 BASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 RNU6-1020P-201ENST00000363684 107 ntBASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 RNU6-662P-201ENST00000384253 104 ntBASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 AC007064.1-201ENST00000412238 351 ntBASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 RPS29P6-201ENST00000438196 145 ntBASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 RPS3P1-201ENST00000456781 192 ntBASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 SCARNA17.1-201ENST00000516211 143 ntBASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 SCARNA17.2-201ENST00000516334 143 ntBASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 RNU6-107P-201ENST00000516643 102 ntBASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 AC013412.1-201ENST00000610687 192 ntBASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 uc_338.14-201ENST00000613162 166 ntBASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 SCARNA17.4-201ENST00000614296 143 ntBASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 AC005562.2-201ENST00000618264 111 ntBASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 MIR6733-201ENST00000635723 61 ntBASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC3.05□□□□□ -1.92
CTDP1Q9Y5B0 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 RNU6-545P-201ENST00000362681 104 ntBASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 RNU4-80P-201ENST00000363200 141 ntBASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 Y_RNA.415-201ENST00000384012 112 ntBASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 RNU6-1072P-201ENST00000384703 107 ntBASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 RNU6-443P-201ENST00000384780 107 ntBASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 PCNPP3-201ENST00000393579 471 ntBASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 COX6CP10-201ENST00000416832 224 ntBASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 AC004386.2-201ENST00000441858 148 ntBASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 AC009237.7-201ENST00000447357 229 ntBASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 AC087441.2-201ENST00000529141 262 ntBASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 MIR3145-201ENST00000580727 82 ntBASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 TCL6_2.1-201ENST00000615162 119 ntBASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC3.04□□□□□ -1.92
CTDP1Q9Y5B0 snoU2_19.1-201ENST00000362361 80 ntBASIC3.03□□□□□ -1.92
CTDP1Q9Y5B0 RNA5SP393-201ENST00000363423 117 ntBASIC3.03□□□□□ -1.92
CTDP1Q9Y5B0 RNU2-54P-201ENST00000410299 190 ntBASIC3.03□□□□□ -1.92
CTDP1Q9Y5B0 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC3.03□□□□□ -1.92
CTDP1Q9Y5B0 AC079598.5-201ENST00000547460 117 ntBASIC3.03□□□□□ -1.92
CTDP1Q9Y5B0 MIR5006-201ENST00000583027 110 ntBASIC3.03□□□□□ -1.92
CTDP1Q9Y5B0 AC006380.1-201ENST00000603598 186 ntBASIC3.03□□□□□ -1.92
CTDP1Q9Y5B0 AC011921.3-201ENST00000605540 361 ntBASIC3.03□□□□□ -1.92
CTDP1Q9Y5B0 AC005828.6-201ENST00000606610 232 ntBASIC3.03□□□□□ -1.92
CTDP1Q9Y5B0 SNORD11B-201ENST00000607707 90 ntBASIC3.03□□□□□ -1.92
CTDP1Q9Y5B0 DLEU2_6.1-201ENST00000610536 112 ntBASIC3.03□□□□□ -1.92
CTDP1Q9Y5B0 AC073349.3-201ENST00000617616 186 ntBASIC3.03□□□□□ -1.92
CTDP1Q9Y5B0 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC3.03□□□□□ -1.92
CTDP1Q9Y5B0 AC069528.2-201ENST00000624849 1991 ntBASIC3.03□□□□□ -1.92
CTDP1Q9Y5B0 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.02□□□□□ -1.93
CTDP1Q9Y5B0 SNORA18.2-201ENST00000383865 132 ntBASIC3.02□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms