Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AL022345.2-201ENST00000606307 135 ntBASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 AC027335.2-201ENST00000624030 375 ntBASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 snoZ196.1-201ENST00000625269 89 ntBASIC1.11□□□□□ -2.23
CTNNA3Q9UI47 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 MIR373-201ENST00000362273 69 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 RNU1-124P-201ENST00000363861 145 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 Y_RNA.287-201ENST00000364853 94 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 RNU1-133P-201ENST00000364867 167 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 RNU6-933P-201ENST00000384424 107 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 MIR450B-201ENST00000401182 78 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 RNU2-66P-201ENST00000410650 161 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 MTND1P26-201ENST00000440488 538 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 AC079354.2-201ENST00000453523 154 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 RNA5SP436-201ENST00000516020 115 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 AC025647.1-201ENST00000517879 253 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 AC026407.1-201ENST00000518369 204 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 CYCSP23-201ENST00000519781 313 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 AL442163.3-201ENST00000554110 156 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 RMST_3.1-201ENST00000611651 109 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 MIR6863-201ENST00000636112 90 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 AC068647.2-201ENST00000637380 353 ntBASIC1.1□□□□□ -2.23
CTNNA3Q9UI47 AP000568.1-201ENST00000282964 442 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 SNORD50.1-201ENST00000362987 71 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 RNU4-9P-201ENST00000364951 139 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 SEPT14P3-201ENST00000439401 183 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 AL732372.2-207ENST00000445840 183 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 AC016717.1-201ENST00000448918 286 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 SEPT14P2-201ENST00000453405 183 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 SEPT14P4-201ENST00000513445 186 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 SNORD116-28-201ENST00000516123 91 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 FO082796.1-201ENST00000523795 183 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 MIR3611-201ENST00000584484 83 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 AC010620.1-201ENST00000601088 1102 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 AL020996.3-201ENST00000606617 222 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 Z99129.1-201ENST00000612510 255 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 AC097520.1-201ENST00000624435 385 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 AL078596.1-201ENST00000624856 447 ntBASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC1.09□□□□□ -2.23
CTNNA3Q9UI47 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.09□□□□□ -2.24
CTNNA3Q9UI47 RNU6-1305P-201ENST00000364353 104 ntBASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 RNU6-1240P-201ENST00000365155 104 ntBASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 Y_RNA.374-201ENST00000365606 101 ntBASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 MIR625-201ENST00000385047 85 ntBASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 MIR549A-201ENST00000385268 96 ntBASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 AF228730.1-201ENST00000397972 663 ntBASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 DAP3P1-201ENST00000441522 278 ntBASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 HMGN1P12-201ENST00000499125 195 ntBASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 AC019235.1-201ENST00000503847 207 ntBASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 MTND1P5-201ENST00000517906 940 ntBASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 AL162413.1-201ENST00000603198 110 ntBASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 SNORD11B-201ENST00000607707 90 ntBASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 DISC2.1-201ENST00000612827 205 ntBASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 AL158209.2-201ENST00000619266 216 ntBASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.08□□□□□ -2.24
CTNNA3Q9UI47 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 RNU5F-3P-201ENST00000363767 117 ntBASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 RNU4-41P-201ENST00000364426 143 ntBASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 Y_RNA.409-201ENST00000383990 98 ntBASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 MIR521-1-201ENST00000384902 87 ntBASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 AL356776.1-201ENST00000406574 447 ntBASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 RNA5SP504-201ENST00000410676 117 ntBASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 AC016909.1-201ENST00000415916 166 ntBASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 ZNF885P-201ENST00000420174 1098 ntBASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 AL500522.1-201ENST00000423667 318 ntTSL 3 BASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 MTND3P21-201ENST00000433774 331 ntBASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 AC107401.1-201ENST00000503426 685 ntBASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 RNU6-1332P-201ENST00000516666 104 ntBASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 MTND3P12-201ENST00000559068 328 ntBASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 AC004584.2-201ENST00000570407 410 ntBASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 U6.108-201ENST00000637764 58 ntBASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 AL391516.1-201ENST00000554380 2449 ntBASIC1.07□□□□□ -2.24
CTNNA3Q9UI47 U3.8-201ENST00000363675 217 ntBASIC1.06□□□□□ -2.24
CTNNA3Q9UI47 Y_RNA.212-201ENST00000364177 102 ntBASIC1.06□□□□□ -2.24
CTNNA3Q9UI47 Y_RNA.372-201ENST00000365599 102 ntBASIC1.06□□□□□ -2.24
CTNNA3Q9UI47 RNU6-908P-201ENST00000410160 94 ntBASIC1.06□□□□□ -2.24
CTNNA3Q9UI47 MTATP6P17-201ENST00000431030 672 ntBASIC1.06□□□□□ -2.24
CTNNA3Q9UI47 AL353572.1-201ENST00000442490 417 ntBASIC1.06□□□□□ -2.24
CTNNA3Q9UI47 MTND1P29-201ENST00000448112 647 ntBASIC1.06□□□□□ -2.24
CTNNA3Q9UI47 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC1.06□□□□□ -2.24
CTNNA3Q9UI47 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.06□□□□□ -2.24
CTNNA3Q9UI47 AL512360.1-201ENST00000555346 234 ntBASIC1.06□□□□□ -2.24
CTNNA3Q9UI47 NBR2-204ENST00000587322 63 ntBASIC1.06□□□□□ -2.24
CTNNA3Q9UI47 AL359075.3-201ENST00000613288 217 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms