Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 TSLP-202ENST00000379706 2411 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
DKK3Q9UBP4 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.7□□□□□ -1.98
DKK3Q9UBP4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC2.69□□□□□ -1.98
DKK3Q9UBP4 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
DKK3Q9UBP4 SNORD27-201ENST00000363981 72 ntBASIC2.69□□□□□ -1.98
DKK3Q9UBP4 RNU6-338P-201ENST00000383888 105 ntBASIC2.69□□□□□ -1.98
DKK3Q9UBP4 Y_RNA.569-201ENST00000384749 103 ntBASIC2.69□□□□□ -1.98
DKK3Q9UBP4 MIR196B-201ENST00000384852 84 ntBASIC2.69□□□□□ -1.98
DKK3Q9UBP4 RNU4-30P-201ENST00000410245 143 ntBASIC2.69□□□□□ -1.98
DKK3Q9UBP4 RNU2-52P-201ENST00000410680 190 ntBASIC2.69□□□□□ -1.98
DKK3Q9UBP4 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.69□□□□□ -1.98
DKK3Q9UBP4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.69□□□□□ -1.98
DKK3Q9UBP4 AC011753.1-201ENST00000451001 220 ntBASIC2.69□□□□□ -1.98
DKK3Q9UBP4 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC2.69□□□□□ -1.98
DKK3Q9UBP4 RNU4-71P-201ENST00000516258 113 ntBASIC2.69□□□□□ -1.98
DKK3Q9UBP4 RNA5SP282-201ENST00000516355 108 ntBASIC2.69□□□□□ -1.98
DKK3Q9UBP4 SNORA31.11-201ENST00000516528 139 ntBASIC2.69□□□□□ -1.98
DKK3Q9UBP4 Y_RNA.700-201ENST00000516806 100 ntBASIC2.69□□□□□ -1.98
DKK3Q9UBP4 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
DKK3Q9UBP4 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.68□□□□□ -1.98
DKK3Q9UBP4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
DKK3Q9UBP4 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
DKK3Q9UBP4 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
DKK3Q9UBP4 RNU6-1266P-201ENST00000362794 105 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 Y_RNA.136-201ENST00000363444 102 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 SNORD32B-201ENST00000364460 84 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 RNU6-200P-201ENST00000364743 107 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 MIR29B2-201ENST00000385055 81 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 RNA5SP247-201ENST00000411181 105 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 RAB28P5-201ENST00000427490 651 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 AC027124.2-201ENST00000428249 105 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.68□□□□□ -1.98
DKK3Q9UBP4 AC009237.7-201ENST00000447357 229 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 AC005042.3-201ENST00000453230 174 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 RN7SL297P-201ENST00000483161 293 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 HMGB3P17-201ENST00000504195 649 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC2.68□□□□□ -1.98
DKK3Q9UBP4 AC008413.1-201ENST00000511864 177 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 RNU1-41P-201ENST00000516161 162 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 RNU1-48P-201ENST00000516400 162 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 SCARNA24.2-201ENST00000516968 130 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 RPL30P11-203ENST00000598995 310 ntBASIC2.68□□□□□ -1.98
DKK3Q9UBP4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
DKK3Q9UBP4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
DKK3Q9UBP4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.68□□□□□ -1.98
DKK3Q9UBP4 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
DKK3Q9UBP4 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
DKK3Q9UBP4 snoU2_19.1-201ENST00000362361 80 ntBASIC2.67□□□□□ -1.98
DKK3Q9UBP4 Y_RNA.277-201ENST00000364754 102 ntBASIC2.67□□□□□ -1.98
DKK3Q9UBP4 DEFA7P-201ENST00000382676 285 ntBASIC2.67□□□□□ -1.98
DKK3Q9UBP4 RNU1-52P-201ENST00000384190 164 ntBASIC2.67□□□□□ -1.98
DKK3Q9UBP4 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
DKK3Q9UBP4 RNU2-14P-201ENST00000411053 191 ntBASIC2.67□□□□□ -1.98
DKK3Q9UBP4 AC004866.1-201ENST00000411748 78 ntBASIC2.67□□□□□ -1.98
DKK3Q9UBP4 Z82209.1-201ENST00000422141 2135 ntBASIC2.67□□□□□ -1.98
DKK3Q9UBP4 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.67□□□□□ -1.98
DKK3Q9UBP4 AC004386.2-201ENST00000441858 148 ntBASIC2.67□□□□□ -1.98
DKK3Q9UBP4 DEFB131C-201ENST00000528817 165 ntBASIC2.67□□□□□ -1.98
DKK3Q9UBP4 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.67□□□□□ -1.98
DKK3Q9UBP4 AC055872.1-201ENST00000570978 278 ntBASIC2.67□□□□□ -1.98
DKK3Q9UBP4 AC008749.1-201ENST00000597650 306 ntBASIC2.67□□□□□ -1.98
DKK3Q9UBP4 AC037487.3-201ENST00000606668 112 ntBASIC2.67□□□□□ -1.98
DKK3Q9UBP4 SNORD11B-201ENST00000607707 90 ntBASIC2.67□□□□□ -1.98
DKK3Q9UBP4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
DKK3Q9UBP4 AC010329.5-201ENST00000623497 2174 ntBASIC2.67□□□□□ -1.98
DKK3Q9UBP4 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.67□□□□□ -1.98
DKK3Q9UBP4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
DKK3Q9UBP4 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC2.66□□□□□ -1.98
DKK3Q9UBP4 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
DKK3Q9UBP4 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.66□□□□□ -1.98
DKK3Q9UBP4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
DKK3Q9UBP4 Y_RNA.44-201ENST00000362676 108 ntBASIC2.66□□□□□ -1.98
DKK3Q9UBP4 Y_RNA.331-201ENST00000365267 102 ntBASIC2.66□□□□□ -1.98
DKK3Q9UBP4 Y_RNA.446-201ENST00000384178 104 ntBASIC2.66□□□□□ -1.98
DKK3Q9UBP4 Y_RNA.785-201ENST00000384290 109 ntBASIC2.66□□□□□ -1.98
DKK3Q9UBP4 RNA5SP210-201ENST00000391034 120 ntBASIC2.66□□□□□ -1.98
DKK3Q9UBP4 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.66□□□□□ -1.98
DKK3Q9UBP4 LINC01766-201ENST00000453968 362 ntTSL 3 BASIC2.66□□□□□ -1.98
DKK3Q9UBP4 RNA5SP24-201ENST00000516478 95 ntBASIC2.66□□□□□ -1.98
DKK3Q9UBP4 RNU2-44P-201ENST00000516795 194 ntBASIC2.66□□□□□ -1.98
DKK3Q9UBP4 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC2.66□□□□□ -1.98
DKK3Q9UBP4 MIR5006-201ENST00000583027 110 ntBASIC2.66□□□□□ -1.98
DKK3Q9UBP4 AC004467.1-201ENST00000615678 330 ntBASIC2.66□□□□□ -1.98
DKK3Q9UBP4 AC006001.4-201ENST00000622243 395 ntBASIC2.66□□□□□ -1.98
DKK3Q9UBP4 AC068205.3-201ENST00000636385 468 ntBASIC2.66□□□□□ -1.98
DKK3Q9UBP4 MIR3674-201ENST00000636576 68 ntBASIC2.66□□□□□ -1.98
DKK3Q9UBP4 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
DKK3Q9UBP4 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.66□□□□□ -1.98
DKK3Q9UBP4 U8.2-201ENST00000363156 134 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 RNU6-727P-201ENST00000363592 107 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 Y_RNA.238-201ENST00000364441 102 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 SNORA72.2-201ENST00000365028 127 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 SNORA18.2-201ENST00000383865 132 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 RNU6-1264P-201ENST00000383891 107 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 SNORA67.2-201ENST00000384300 149 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 MIR592-201ENST00000384959 97 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 NDUFB4P10-201ENST00000452541 359 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 snoU13.23-201ENST00000458863 104 ntBASIC2.65□□□□□ -1.99
DKK3Q9UBP4 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC2.65□□□□□ -1.99
DKK3Q9UBP4 IGLV3-17-201ENST00000519099 244 ntBASIC2.65□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 170.3 ms