Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 MIR4790-201ENST00000577799 79 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 AC018638.8-201ENST00000588755 281 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 AC002553.4-201ENST00000616896 331 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 MTND4P12-201ENST00000498999 1377 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 ICE2P2-201ENST00000483823 2787 ntBASIC1.18□□□□□ -2.22
CLCF1Q9UBD9 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 MIR337-201ENST00000362281 93 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 RNU6-595P-201ENST00000363944 107 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 RNU6-793P-201ENST00000384233 104 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 SNORA40.6-201ENST00000391153 128 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 AL356776.1-201ENST00000406574 447 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 USP9YP30-201ENST00000430729 455 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 SNORD5.1-201ENST00000458800 75 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 AC011352.1-201ENST00000512300 793 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 RNA5SP61-201ENST00000516453 100 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 AP003033.1-201ENST00000527244 415 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 MIR8063-201ENST00000621930 81 ntBASIC1.17□□□□□ -2.22
CLCF1Q9UBD9 SNORD33-201ENST00000362761 85 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 SNORA33-201ENST00000363664 130 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.179-201ENST00000363844 90 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 RNU6-271P-201ENST00000363858 105 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 SNORD87-201ENST00000364849 89 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.405-201ENST00000383979 100 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.451-201ENST00000384200 100 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.524-201ENST00000384564 100 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.561-201ENST00000384694 100 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 RNA5SP467-201ENST00000391274 118 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 MIR1185-2-201ENST00000408687 86 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AC016909.1-201ENST00000415916 166 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 EIF1P1-201ENST00000421436 341 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AL445305.1-201ENST00000432577 575 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AC245517.4-201ENST00000448601 281 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 RNU6-329P-201ENST00000459618 107 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AP000870.1-201ENST00000472927 406 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AC093303.1-201ENST00000514549 295 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.682-201ENST00000516457 100 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 Y_RNA.706-201ENST00000516933 99 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AL160236.1-201ENST00000556317 195 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 UBL5P4-201ENST00000562584 236 ntBASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.16□□□□□ -2.22
CLCF1Q9UBD9 AL161722.3-201ENST00000605789 2983 ntBASIC1.15□□□□□ -2.22
CLCF1Q9UBD9 RNU6-1266P-201ENST00000362794 105 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 Y_RNA.86-201ENST00000363020 111 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 RNU6-727P-201ENST00000363592 107 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 RNU6-1059P-201ENST00000363752 98 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 SNORD1A-201ENST00000364968 72 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 Y_RNA.415-201ENST00000384012 112 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 MIR758-201ENST00000390227 88 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 FCF1P9-201ENST00000412546 282 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 RPS26P55-201ENST00000471178 356 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AC091179.3-201ENST00000474761 144 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 HMGN1P12-201ENST00000499125 195 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AC103851.1-201ENST00000506833 274 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 RNA5SP445-201ENST00000515889 115 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 RNU1-142P-201ENST00000516682 145 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AF235103.2-201ENST00000525753 346 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 MIR4709-201ENST00000577272 72 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AC100812.1-201ENST00000607622 580 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AL359075.3-201ENST00000613288 217 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AC007014.2-201ENST00000615581 479 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 MIR7974-201ENST00000615835 79 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 AC095038.3-201ENST00000634439 195 ntBASIC1.15□□□□□ -2.23
CLCF1Q9UBD9 RNU6-842P-201ENST00000384269 107 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 RNU6-950P-201ENST00000384651 107 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 MIR10B-201ENST00000385011 110 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 MIR150-201ENST00000385048 84 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AL161935.2-201ENST00000414627 60 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 RPS29P29-201ENST00000456396 171 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AL163195.1-201ENST00000496941 348 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 MTND5P5-201ENST00000503764 376 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AC079140.2-201ENST00000506193 142 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AL137100.2-201ENST00000555786 315 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AC010999.1-201ENST00000611856 324 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AC139792.2-201ENST00000624218 587 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 AC068137.4-201ENST00000638485 296 ntBASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.14□□□□□ -2.23
CLCF1Q9UBD9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 MTND5P35-201ENST00000557537 1720 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 MIR302D-201ENST00000362275 68 ntBASIC1.13□□□□□ -2.23
CLCF1Q9UBD9 Y_RNA.238-201ENST00000364441 102 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 291.7 ms