Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 RPL21P38-201ENST00000418090 167 ntBASIC2.57□□□□□ -2
DNMT3BQ9UBC3 RAB28P5-201ENST00000427490 651 ntBASIC2.57□□□□□ -2
DNMT3BQ9UBC3 AC074290.1-201ENST00000448883 135 ntBASIC2.57□□□□□ -2
DNMT3BQ9UBC3 NDUFB4P10-201ENST00000452541 359 ntBASIC2.57□□□□□ -2
DNMT3BQ9UBC3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.57□□□□□ -2
DNMT3BQ9UBC3 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.57□□□□□ -2
DNMT3BQ9UBC3 AK6P2-201ENST00000549020 471 ntBASIC2.57□□□□□ -2
DNMT3BQ9UBC3 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.57□□□□□ -2
DNMT3BQ9UBC3 AC136932.1-201ENST00000574771 208 ntBASIC2.57□□□□□ -2
DNMT3BQ9UBC3 MIR4300-201ENST00000581016 96 ntBASIC2.57□□□□□ -2
DNMT3BQ9UBC3 MIR3128-201ENST00000581957 66 ntBASIC2.57□□□□□ -2
DNMT3BQ9UBC3 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC2.57□□□□□ -2
DNMT3BQ9UBC3 MIR4753-201ENST00000585119 83 ntBASIC2.57□□□□□ -2
DNMT3BQ9UBC3 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.57□□□□□ -2
DNMT3BQ9UBC3 AC005176.2-201ENST00000596933 147 ntBASIC2.57□□□□□ -2
DNMT3BQ9UBC3 AC046143.2-201ENST00000609789 160 ntBASIC2.57□□□□□ -2
DNMT3BQ9UBC3 ZBED5-202ENST00000432999 2741 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
DNMT3BQ9UBC3 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.57□□□□□ -2
DNMT3BQ9UBC3 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.57□□□□□ -2
DNMT3BQ9UBC3 U3.8-201ENST00000363675 217 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 RNA5SP456-201ENST00000364002 114 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 SNORD87-201ENST00000364849 89 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 SNORD31B-201ENST00000364977 69 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 RNU6-1264P-201ENST00000383891 107 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 SNORD63-201ENST00000384262 68 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 MIR504-201ENST00000385065 83 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 SNORD115-46-201ENST00000390982 71 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 MIR1302-6-201ENST00000408466 90 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 MIR1283-1-201ENST00000408494 87 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 RN7SKP223-201ENST00000410582 62 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 ELOCP21-201ENST00000412558 336 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 AC009310.1-201ENST00000414414 451 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.56□□□□□ -2
DNMT3BQ9UBC3 CR769767.1-201ENST00000436337 346 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 MTND2P29-201ENST00000438595 412 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.56□□□□□ -2
DNMT3BQ9UBC3 AC114982.1-201ENST00000469402 321 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 AC098869.1-201ENST00000481627 292 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 MIR5092-201ENST00000583139 88 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 U4atac.1-201ENST00000618345 95 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 MIR1248-201ENST00000629190 106 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
DNMT3BQ9UBC3 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.56□□□□□ -2
DNMT3BQ9UBC3 AC010615.1-201ENST00000594254 1764 ntBASIC2.56□□□□□ -2
DNMT3BQ9UBC3 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
DNMT3BQ9UBC3 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.55□□□□□ -2
DNMT3BQ9UBC3 RNU6-545P-201ENST00000362681 104 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 RNU6-743P-201ENST00000364151 106 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 Y_RNA.257-201ENST00000364596 102 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 DEFA7P-201ENST00000382676 285 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 SNORA67.2-201ENST00000384300 149 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 RNU2-20P-201ENST00000410425 191 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 RNU6-121P-201ENST00000410525 99 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 RNA5SP504-201ENST00000410676 117 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 AC007064.1-201ENST00000412238 351 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 AL135786.1-201ENST00000415892 214 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC2.55□□□□□ -2
DNMT3BQ9UBC3 AC096920.1-201ENST00000423991 241 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 RNU6-1132P-201ENST00000459214 107 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 ATP5EP1-201ENST00000510257 156 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 RNU6-237P-201ENST00000515985 71 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 RNA5SP490-201ENST00000517141 136 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 AC021269.2-201ENST00000532318 330 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.55□□□□□ -2
DNMT3BQ9UBC3 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC2.55□□□□□ -2
DNMT3BQ9UBC3 MIR4648-201ENST00000580107 72 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 AL137847.3-201ENST00000611521 109 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 FO624990.1-201ENST00000636373 85 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 MIR3674-201ENST00000636576 68 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 AC016717.2-201ENST00000609089 5141 ntBASIC2.55□□□□□ -2
DNMT3BQ9UBC3 RNU6-21P-201ENST00000384710 107 ntBASIC2.54□□□□□ -2
DNMT3BQ9UBC3 MIR215-201ENST00000384858 110 ntBASIC2.54□□□□□ -2
DNMT3BQ9UBC3 TOMM22P2-201ENST00000430735 237 ntBASIC2.54□□□□□ -2
DNMT3BQ9UBC3 AC009238.1-201ENST00000442165 424 ntBASIC2.54□□□□□ -2
DNMT3BQ9UBC3 AC009237.6-201ENST00000446969 424 ntBASIC2.54□□□□□ -2
DNMT3BQ9UBC3 SNORD127-201ENST00000458892 86 ntBASIC2.54□□□□□ -2
DNMT3BQ9UBC3 HMGN2P9-201ENST00000476875 229 ntBASIC2.54□□□□□ -2
DNMT3BQ9UBC3 HMGB3P17-201ENST00000504195 649 ntBASIC2.54□□□□□ -2
DNMT3BQ9UBC3 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC2.54□□□□□ -2
DNMT3BQ9UBC3 Y_RNA.673-201ENST00000516306 88 ntBASIC2.54□□□□□ -2
DNMT3BQ9UBC3 RNA5SP281-201ENST00000516504 135 ntBASIC2.54□□□□□ -2
DNMT3BQ9UBC3 RNU7-110P-201ENST00000516891 62 ntBASIC2.54□□□□□ -2
DNMT3BQ9UBC3 AC022469.2-201ENST00000554759 396 ntTSL 5 BASIC2.54□□□□□ -2
DNMT3BQ9UBC3 AC010900.2-201ENST00000604508 210 ntBASIC2.54□□□□□ -2
DNMT3BQ9UBC3 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC2.54□□□□□ -2
DNMT3BQ9UBC3 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
DNMT3BQ9UBC3 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.53□□□□□ -2
DNMT3BQ9UBC3 ZNF271P-202ENST00000465539 1970 ntBASIC2.53□□□□□ -2
DNMT3BQ9UBC3 MIR6073-201ENST00000352083 89 ntBASIC2.53□□□□□ -2
DNMT3BQ9UBC3 MIR410-201ENST00000362222 80 ntBASIC2.53□□□□□ -2
DNMT3BQ9UBC3 SNORD113-8-201ENST00000363497 74 ntBASIC2.53□□□□□ -2
DNMT3BQ9UBC3 Y_RNA.288-201ENST00000364854 92 ntBASIC2.53□□□□□ -2
DNMT3BQ9UBC3 RNU6-1175P-201ENST00000365200 107 ntBASIC2.53□□□□□ -2
DNMT3BQ9UBC3 SNORA25B-201ENST00000365507 128 ntBASIC2.53□□□□□ -2
DNMT3BQ9UBC3 Y_RNA.570-201ENST00000384750 101 ntBASIC2.53□□□□□ -2
DNMT3BQ9UBC3 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.53□□□□□ -2
DNMT3BQ9UBC3 AL356320.1-201ENST00000429616 163 ntBASIC2.53□□□□□ -2
DNMT3BQ9UBC3 SUMO1P3-201ENST00000439961 304 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 508.9 ms