Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
LRFN1Q9P244 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
LRFN1Q9P244 AL159152.1-201ENST00000635019 2587 ntBASIC2.32□□□□□ -2.04
LRFN1Q9P244 Y_RNA.27-201ENST00000362540 103 ntBASIC2.32□□□□□ -2.04
LRFN1Q9P244 SNORA16B-201ENST00000364674 135 ntBASIC2.32□□□□□ -2.04
LRFN1Q9P244 SNORA51.11-201ENST00000384442 131 ntBASIC2.32□□□□□ -2.04
LRFN1Q9P244 MIR1185-2-201ENST00000408687 86 ntBASIC2.32□□□□□ -2.04
LRFN1Q9P244 MIR1252-201ENST00000408861 65 ntBASIC2.32□□□□□ -2.04
LRFN1Q9P244 SNORD12B-201ENST00000410433 91 ntBASIC2.32□□□□□ -2.04
LRFN1Q9P244 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
LRFN1Q9P244 TOMM22P2-201ENST00000430735 237 ntBASIC2.32□□□□□ -2.04
LRFN1Q9P244 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC2.32□□□□□ -2.04
LRFN1Q9P244 SRP72-202ENST00000504757 745 ntTSL 2 BASIC2.32□□□□□ -2.04
LRFN1Q9P244 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC2.32□□□□□ -2.04
LRFN1Q9P244 RNU6-107P-201ENST00000516643 102 ntBASIC2.32□□□□□ -2.04
LRFN1Q9P244 Y_RNA.715-201ENST00000517082 110 ntBASIC2.32□□□□□ -2.04
LRFN1Q9P244 MIR4524B-201ENST00000581569 115 ntBASIC2.32□□□□□ -2.04
LRFN1Q9P244 AC005786.1-201ENST00000588553 154 ntBASIC2.32□□□□□ -2.04
LRFN1Q9P244 RPS29P30-201ENST00000600975 111 ntBASIC2.32□□□□□ -2.04
LRFN1Q9P244 Six3os1_7.1-201ENST00000621512 201 ntBASIC2.32□□□□□ -2.04
LRFN1Q9P244 MIR410-201ENST00000362222 80 ntBASIC2.31□□□□□ -2.04
LRFN1Q9P244 RNU6-1309P-201ENST00000363305 108 ntBASIC2.31□□□□□ -2.04
LRFN1Q9P244 Y_RNA.380-201ENST00000365663 111 ntBASIC2.31□□□□□ -2.04
LRFN1Q9P244 Y_RNA.551-201ENST00000384661 102 ntBASIC2.31□□□□□ -2.04
LRFN1Q9P244 MIR504-201ENST00000385065 83 ntBASIC2.31□□□□□ -2.04
LRFN1Q9P244 RNA5SP210-201ENST00000391034 120 ntBASIC2.31□□□□□ -2.04
LRFN1Q9P244 SNORD78.2-201ENST00000391076 69 ntBASIC2.31□□□□□ -2.04
LRFN1Q9P244 MTND3P2-201ENST00000438452 342 ntBASIC2.31□□□□□ -2.04
LRFN1Q9P244 FCF1P4-201ENST00000448326 183 ntBASIC2.31□□□□□ -2.04
LRFN1Q9P244 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC2.31□□□□□ -2.04
LRFN1Q9P244 SNORA40.9-201ENST00000515895 93 ntBASIC2.31□□□□□ -2.04
LRFN1Q9P244 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC2.31□□□□□ -2.04
LRFN1Q9P244 AL117187.1-201ENST00000555482 181 ntBASIC2.31□□□□□ -2.04
LRFN1Q9P244 MIR4769-201ENST00000584126 77 ntBASIC2.31□□□□□ -2.04
LRFN1Q9P244 AL353149.1-201ENST00000610667 244 ntBASIC2.31□□□□□ -2.04
LRFN1Q9P244 DLEU2_2.2-201ENST00000615474 90 ntBASIC2.31□□□□□ -2.04
LRFN1Q9P244 AC022513.1-201ENST00000624512 117 ntBASIC2.31□□□□□ -2.04
LRFN1Q9P244 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.31□□□□□ -2.04
LRFN1Q9P244 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.31□□□□□ -2.04
LRFN1Q9P244 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
LRFN1Q9P244 ANKRD30BP1-201ENST00000451052 2186 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
LRFN1Q9P244 RNU6-1264P-201ENST00000383891 107 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 Y_RNA.498-201ENST00000384460 102 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 SNORA67.4-201ENST00000384688 142 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 SNORA3.2-201ENST00000408221 125 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 MIR548F4-201ENST00000408515 105 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 RNU6-57P-201ENST00000411348 103 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 AC009963.1-201ENST00000417265 157 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 AC060773.1-201ENST00000421698 310 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 DPH3P2-201ENST00000422618 250 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.3□□□□□ -2.04
LRFN1Q9P244 ATP5J2P3-201ENST00000451550 258 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.3□□□□□ -2.04
LRFN1Q9P244 AC010469.2-201ENST00000496412 480 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 AC107222.1-201ENST00000510899 637 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 RNU6-1012P-201ENST00000516606 109 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 SUMO2P18-201ENST00000518873 252 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 AP005660.1-201ENST00000522972 293 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 AC008269.2-201ENST00000561915 1105 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.3□□□□□ -2.04
LRFN1Q9P244 AL021879.1-201ENST00000611756 288 ntBASIC2.3□□□□□ -2.04
LRFN1Q9P244 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.3□□□□□ -2.04
LRFN1Q9P244 ZNF658B-202ENST00000615961 3375 ntBASIC2.29□□□□□ -2.04
LRFN1Q9P244 MIR6073-201ENST00000352083 89 ntBASIC2.29□□□□□ -2.04
LRFN1Q9P244 RNU4-50P-201ENST00000364361 141 ntBASIC2.29□□□□□ -2.04
LRFN1Q9P244 AL355497.1-201ENST00000406262 551 ntBASIC2.29□□□□□ -2.04
LRFN1Q9P244 AC008134.1-201ENST00000420943 193 ntBASIC2.29□□□□□ -2.04
LRFN1Q9P244 AC010655.3-201ENST00000478818 450 ntBASIC2.29□□□□□ -2.04
LRFN1Q9P244 AC025647.1-201ENST00000517879 253 ntBASIC2.29□□□□□ -2.04
LRFN1Q9P244 AC018448.1-201ENST00000552843 316 ntBASIC2.29□□□□□ -2.04
LRFN1Q9P244 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.29□□□□□ -2.04
LRFN1Q9P244 AL355297.3-201ENST00000604082 446 ntBASIC2.29□□□□□ -2.04
LRFN1Q9P244 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.29□□□□□ -2.04
LRFN1Q9P244 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.29□□□□□ -2.04
LRFN1Q9P244 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.29□□□□□ -2.04
LRFN1Q9P244 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
LRFN1Q9P244 RNA5SP289-201ENST00000362332 137 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 RNU1-51P-201ENST00000365345 176 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 SNORA63.7-201ENST00000365579 123 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 DEFA7P-201ENST00000382676 285 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 Y_RNA.458-201ENST00000384240 102 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 MIR518C-201ENST00000384822 101 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 MIR568-201ENST00000385036 95 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 SNORA48.1-201ENST00000390879 135 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 AC016909.1-201ENST00000415916 166 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 AC096920.1-201ENST00000423991 241 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 IPO7P1-201ENST00000442031 636 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 RPL26P26-201ENST00000480251 434 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 MRPS35P2-201ENST00000508242 191 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.28□□□□□ -2.04
LRFN1Q9P244 AC011406.1-201ENST00000512440 370 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 AC131281.1-201ENST00000522984 164 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 MIR5092-201ENST00000583139 88 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 AL390123.1-201ENST00000603216 237 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 U2.15-201ENST00000611544 191 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 U2.16-201ENST00000613119 191 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 U2.12-201ENST00000613778 191 ntBASIC2.28□□□□□ -2.04
LRFN1Q9P244 U2.20-201ENST00000613956 192 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 159.1 ms