Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 CBX3P8-201ENST00000532412 525 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 MIR4273-201ENST00000582824 84 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 AL359075.3-201ENST00000613288 217 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 MIR6128-201ENST00000615528 109 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 U6.73-201ENST00000619194 103 ntBASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.11□□□□□ -2.23
KCNIP1Q9NZI2 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 RNU6-280P-201ENST00000364145 104 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 MIR513A1-201ENST00000385138 129 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 RNU6-1186P-201ENST00000410429 97 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 AC015922.2-201ENST00000435593 184 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 MTND4P18-201ENST00000447010 465 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 SNORD5.1-201ENST00000458800 75 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 RN7SL429P-201ENST00000479090 223 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 RN7SL489P-201ENST00000486185 223 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 RN7SL327P-201ENST00000488659 223 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 MTND5P5-201ENST00000503764 376 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 RNU7-175P-201ENST00000515915 61 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 RNU6-718P-201ENST00000516166 105 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 RNU1-142P-201ENST00000516682 145 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 AL161670.1-201ENST00000554348 137 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 MIR5695-201ENST00000579717 85 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 RN7SL853P-201ENST00000617250 223 ntBASIC1.1□□□□□ -2.23
KCNIP1Q9NZI2 Y_RNA.179-201ENST00000363844 90 ntBASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 RNU6-281P-201ENST00000384212 103 ntBASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 Y_RNA.573-201ENST00000384763 105 ntBASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 RNU6-1031P-201ENST00000384773 107 ntBASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 AL121890.1-201ENST00000435457 205 ntBASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 MTND4LP16-201ENST00000440828 295 ntBASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 RNU1-123P-201ENST00000458950 160 ntBASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 RN7SKP210-201ENST00000459176 261 ntBASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 RNU6-329P-201ENST00000459618 107 ntBASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 AC011352.1-201ENST00000512300 793 ntBASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 CYP3A52P-201ENST00000563326 91 ntBASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 MIR4790-201ENST00000577799 79 ntBASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 AC022432.1-201ENST00000595739 310 ntBASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 MIR8054-201ENST00000620877 86 ntBASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 MIR7843-201ENST00000622274 79 ntBASIC1.09□□□□□ -2.23
KCNIP1Q9NZI2 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
KCNIP1Q9NZI2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.09□□□□□ -2.24
KCNIP1Q9NZI2 SNORD33-201ENST00000362761 85 ntBASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 RNU6-1013P-201ENST00000384180 107 ntBASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 RNU1-139P-201ENST00000391307 165 ntBASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 SNORD65B-201ENST00000459126 73 ntBASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 RPL30P7-201ENST00000479312 323 ntBASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 Y_RNA.682-201ENST00000516457 100 ntBASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 RNU1-54P-201ENST00000517181 120 ntBASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 SUMO2P16-201ENST00000519475 264 ntBASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 AL512310.8-201ENST00000550183 120 ntBASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 MIR5701-3-201ENST00000578890 82 ntBASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 MIR5701-1-201ENST00000585138 82 ntBASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 AC010999.1-201ENST00000611856 324 ntBASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 AC040896.1-201ENST00000613819 479 ntBASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 MIR5701-2-201ENST00000615634 82 ntBASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 TTK-211ENST00000627129 240 ntTSL 5 BASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 AC091812.1-201ENST00000432235 1948 ntBASIC1.08□□□□□ -2.24
KCNIP1Q9NZI2 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 RNU6-1123P-201ENST00000362347 106 ntBASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 Y_RNA.106-201ENST00000363189 100 ntBASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 RNA5SP259-201ENST00000365541 109 ntBASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 AC245047.3-201ENST00000429428 127 ntBASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 AC069439.1-201ENST00000494739 167 ntBASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 AC026782.1-201ENST00000512952 449 ntBASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 RNU6-1114P-201ENST00000516022 107 ntBASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 RN7SKP179-201ENST00000516126 217 ntBASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 AL137100.2-201ENST00000555786 315 ntBASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 AC018638.8-201ENST00000588755 281 ntBASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 AC125232.2-201ENST00000592457 143 ntBASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 7SK.7-201ENST00000603504 247 ntBASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 AC005014.2-201ENST00000607795 599 ntBASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 AL512598.1-201ENST00000610158 273 ntBASIC1.07□□□□□ -2.24
KCNIP1Q9NZI2 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 RNU6-874P-201ENST00000362390 105 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 RNA5SP327-201ENST00000362494 101 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 Y_RNA.86-201ENST00000363020 111 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 Y_RNA.490-201ENST00000384413 102 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 RNU6-440P-201ENST00000390882 105 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 RNU6-1001P-201ENST00000411265 100 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 SNX2P2-201ENST00000424553 323 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 USMG5P1-201ENST00000425964 177 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 AL513185.1-201ENST00000431638 162 ntTSL 5 BASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 RPL31P58-201ENST00000469001 379 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 Y_RNA.655-201ENST00000515919 96 ntBASIC1.06□□□□□ -2.24
KCNIP1Q9NZI2 RNU7-99P-201ENST00000516271 62 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms