Protein–RNA interactions for Protein: Q9NY59

SMPD3, Sphingomyelin phosphodiesterase 3, humanhuman

Predicted RBP Predictions only

Length 655 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3Q9NY59 MIR513A1-201ENST00000385138 129 ntBASIC1.23□□□□□ -2.21
SMPD3Q9NY59 RNU6-159P-201ENST00000391080 106 ntBASIC1.23□□□□□ -2.21
SMPD3Q9NY59 RNU6-510P-201ENST00000391239 108 ntBASIC1.23□□□□□ -2.21
SMPD3Q9NY59 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC1.23□□□□□ -2.21
SMPD3Q9NY59 AL356776.1-201ENST00000406574 447 ntBASIC1.23□□□□□ -2.21
SMPD3Q9NY59 MIR1289-2-201ENST00000408360 111 ntBASIC1.23□□□□□ -2.21
SMPD3Q9NY59 FCF1P9-201ENST00000412546 282 ntBASIC1.23□□□□□ -2.21
SMPD3Q9NY59 USMG5P1-201ENST00000425964 177 ntBASIC1.23□□□□□ -2.21
SMPD3Q9NY59 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.23□□□□□ -2.21
SMPD3Q9NY59 RNU6-221P-201ENST00000459541 99 ntBASIC1.23□□□□□ -2.21
SMPD3Q9NY59 AC025647.1-201ENST00000517879 253 ntBASIC1.23□□□□□ -2.21
SMPD3Q9NY59 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.23□□□□□ -2.21
SMPD3Q9NY59 AC068790.6-201ENST00000602558 258 ntBASIC1.23□□□□□ -2.21
SMPD3Q9NY59 AC068137.4-201ENST00000638485 296 ntBASIC1.23□□□□□ -2.21
SMPD3Q9NY59 SNORA33-201ENST00000363664 130 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 U3.8-201ENST00000363675 217 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 RNU6-595P-201ENST00000363944 107 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 RNU4-13P-201ENST00000364019 141 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 SNORD87-201ENST00000364849 89 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 RNU6-1240P-201ENST00000365155 104 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 Y_RNA.405-201ENST00000383979 100 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 Y_RNA.451-201ENST00000384200 100 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 RNU6-793P-201ENST00000384233 104 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 Y_RNA.524-201ENST00000384564 100 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 Y_RNA.561-201ENST00000384694 100 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.22□□□□□ -2.21
SMPD3Q9NY59 AC016909.1-201ENST00000415916 166 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC1.22□□□□□ -2.21
SMPD3Q9NY59 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC1.22□□□□□ -2.21
SMPD3Q9NY59 SNORD5.1-201ENST00000458800 75 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 snoU13.23-201ENST00000458863 104 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 RNU7-34P-201ENST00000459394 64 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 RNU6-329P-201ENST00000459618 107 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.22□□□□□ -2.21
SMPD3Q9NY59 MTND5P5-201ENST00000503764 376 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 RN7SKP179-201ENST00000516126 217 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 AF235103.2-201ENST00000525753 346 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.22□□□□□ -2.21
SMPD3Q9NY59 AL512310.8-201ENST00000550183 120 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC1.22□□□□□ -2.21
SMPD3Q9NY59 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC1.22□□□□□ -2.21
SMPD3Q9NY59 MIR4524B-201ENST00000581569 115 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 BNIP3P10-201ENST00000605360 577 ntBASIC1.22□□□□□ -2.21
SMPD3Q9NY59 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.22□□□□□ -2.21
SMPD3Q9NY59 ZNF72P-201ENST00000425869 1908 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 Y_RNA.179-201ENST00000363844 90 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 Y_RNA.287-201ENST00000364853 94 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 Y_RNA.415-201ENST00000384012 112 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 SNORA70.7-201ENST00000384159 133 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 RNU6-842P-201ENST00000384269 107 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 RNA5SP323-201ENST00000391094 133 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 NDUFB4P10-201ENST00000452541 359 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 AP000870.1-201ENST00000472927 406 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 AC091179.3-201ENST00000474761 144 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 HMGN1P12-201ENST00000499125 195 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 AC108210.2-201ENST00000503681 201 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 RNU6-237P-201ENST00000515985 71 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 Y_RNA.706-201ENST00000516933 99 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 AC090821.2-201ENST00000523552 176 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 CYP3A52P-201ENST00000563326 91 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 AC015720.1-201ENST00000565251 277 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 MIR4742-201ENST00000581069 85 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.21□□□□□ -2.22
SMPD3Q9NY59 AC099654.5-201ENST00000636479 350 ntBASIC1.21□□□□□ -2.22
SMPD3Q9NY59 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.21□□□□□ -2.22
SMPD3Q9NY59 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.21□□□□□ -2.22
SMPD3Q9NY59 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
SMPD3Q9NY59 Y_RNA.48-201ENST00000362710 103 ntBASIC1.2□□□□□ -2.22
SMPD3Q9NY59 MIR10B-201ENST00000385011 110 ntBASIC1.2□□□□□ -2.22
SMPD3Q9NY59 RNA5SP467-201ENST00000391274 118 ntBASIC1.2□□□□□ -2.22
SMPD3Q9NY59 MTND1P4-201ENST00000435196 415 ntBASIC1.2□□□□□ -2.22
SMPD3Q9NY59 RPL31P58-201ENST00000469001 379 ntBASIC1.2□□□□□ -2.22
SMPD3Q9NY59 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC1.2□□□□□ -2.22
SMPD3Q9NY59 AC093303.1-201ENST00000514549 295 ntBASIC1.2□□□□□ -2.22
SMPD3Q9NY59 RNU6-1016P-201ENST00000516689 94 ntBASIC1.2□□□□□ -2.22
SMPD3Q9NY59 CBX3P8-201ENST00000532412 525 ntBASIC1.2□□□□□ -2.22
SMPD3Q9NY59 MIR5695-201ENST00000579717 85 ntBASIC1.2□□□□□ -2.22
SMPD3Q9NY59 AC100812.1-201ENST00000607622 580 ntBASIC1.2□□□□□ -2.22
SMPD3Q9NY59 AL365434.2-201ENST00000607979 234 ntBASIC1.2□□□□□ -2.22
SMPD3Q9NY59 CENPF-206ENST00000614578 528 ntTSL 5 BASIC1.2□□□□□ -2.22
SMPD3Q9NY59 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
SMPD3Q9NY59 RNA5SP190-201ENST00000365222 118 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 RNU6-192P-201ENST00000391253 100 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 MIR548F5-201ENST00000408421 86 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 MIR1185-2-201ENST00000408687 86 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 MTND3P8-201ENST00000412909 339 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 AC074085.1-201ENST00000413598 418 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 USP9YP16-201ENST00000430287 407 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 MTND3P23-201ENST00000431980 347 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 AL591806.2-201ENST00000433122 173 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 PGBD4P5-201ENST00000445958 426 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC1.19□□□□□ -2.22
SMPD3Q9NY59 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 USP9YP23-201ENST00000455085 407 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 RPS29P29-201ENST00000456396 171 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 AC069439.1-201ENST00000494739 167 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 AC103851.1-201ENST00000506833 274 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.19□□□□□ -2.22
SMPD3Q9NY59 RNU6-1114P-201ENST00000516022 107 ntBASIC1.19□□□□□ -2.22
SMPD3Q9NY59 AC060780.3-201ENST00000589464 80 ntBASIC1.19□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 228.7 ms