Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 RNU6-57P-201ENST00000411348 103 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 AL591704.2-201ENST00000421658 181 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 Z82188.1-201ENST00000436709 154 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 RNU6-256P-201ENST00000516747 97 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 AC109635.3-201ENST00000529536 185 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 MIR3664-201ENST00000579074 99 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 B3GNTL1P2-201ENST00000603673 288 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 AC080078.3-201ENST00000605407 463 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 AC137590.2-201ENST00000619709 240 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 AC008873.1-201ENST00000625051 138 ntBASIC1.09□□□□□ -2.23
KLHL28Q9NXS3 Y_RNA.100-201ENST00000363141 102 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 Y_RNA.116-201ENST00000363292 103 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 Y_RNA.122-201ENST00000363331 96 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 Y_RNA.135-201ENST00000363439 95 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 RNY4P14-201ENST00000363656 96 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 Y_RNA.212-201ENST00000364177 102 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 Y_RNA.355-201ENST00000365462 98 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 RNA5SP259-201ENST00000365541 109 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 RNU6-790P-201ENST00000384479 105 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 Y_RNA.530-201ENST00000384587 101 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 RNU6-950P-201ENST00000384651 107 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 MIR320B2-201ENST00000408479 138 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 AC016909.1-201ENST00000415916 166 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 HSPE1P13-201ENST00000451143 297 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 COX6CP14-201ENST00000469580 174 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 AC093852.1-201ENST00000503587 266 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 RN7SKP88-201ENST00000516847 250 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 7SK.8-201ENST00000612110 250 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 7SK.11-201ENST00000615477 250 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 MIR7111-201ENST00000619751 72 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 AC138058.1-201ENST00000620572 449 ntTSL 3 BASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 7SK.13-201ENST00000622040 250 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 AL078596.1-201ENST00000624856 447 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 AL133216.2-202ENST00000634512 349 ntBASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC1.08□□□□□ -2.24
KLHL28Q9NXS3 Y_RNA.89-201ENST00000363031 102 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 RNU1-22P-201ENST00000363334 158 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 RNU4-12P-201ENST00000365233 139 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 Y_RNA.414-201ENST00000384011 101 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 SNORA70.7-201ENST00000384159 133 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 Y_RNA.450-201ENST00000384198 113 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 RNU6-306P-201ENST00000384617 107 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 MIR517A-201ENST00000385001 87 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 RNA5SP109-201ENST00000391010 116 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 RNA5SP323-201ENST00000391094 133 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 MIR1285-1-201ENST00000408593 84 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 AL353572.1-201ENST00000442490 417 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 AC003988.1-201ENST00000447198 578 ntTSL 5 BASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 RPS27P1-201ENST00000450552 247 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 PCMTD1P1-201ENST00000455560 355 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 MTCO2P30-201ENST00000503662 364 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 RNU6-344P-201ENST00000516635 111 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 RNU6-273P-201ENST00000516937 96 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 RNA5SP404-201ENST00000517118 132 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 MIR4452-201ENST00000583004 71 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 AL929325.1-201ENST00000603096 117 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 AL050343.2-201ENST00000607338 280 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 DLEU2_5.1-201ENST00000615567 84 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 snoZ196.1-201ENST00000625269 89 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 ZNF204P-201ENST00000416749 2397 ntBASIC1.07□□□□□ -2.24
KLHL28Q9NXS3 Y_RNA.9-201ENST00000362354 101 ntBASIC1.06□□□□□ -2.24
KLHL28Q9NXS3 SNORD114-27-201ENST00000363766 70 ntBASIC1.06□□□□□ -2.24
KLHL28Q9NXS3 SNORD114-22-201ENST00000365423 72 ntBASIC1.06□□□□□ -2.24
KLHL28Q9NXS3 MIR518E-201ENST00000385252 88 ntBASIC1.06□□□□□ -2.24
KLHL28Q9NXS3 MIR548F1-201ENST00000408667 84 ntBASIC1.06□□□□□ -2.24
KLHL28Q9NXS3 ZNF885P-201ENST00000420174 1098 ntBASIC1.06□□□□□ -2.24
KLHL28Q9NXS3 AL445305.1-201ENST00000432577 575 ntBASIC1.06□□□□□ -2.24
KLHL28Q9NXS3 AL606517.2-201ENST00000442855 241 ntBASIC1.06□□□□□ -2.24
KLHL28Q9NXS3 TRBVA-201ENST00000498804 316 ntBASIC1.06□□□□□ -2.24
KLHL28Q9NXS3 RNU6-1088P-201ENST00000516850 104 ntBASIC1.06□□□□□ -2.24
KLHL28Q9NXS3 AC025647.1-201ENST00000517879 253 ntBASIC1.06□□□□□ -2.24
KLHL28Q9NXS3 AC021506.2-201ENST00000612354 169 ntBASIC1.06□□□□□ -2.24
KLHL28Q9NXS3 AC100810.6-201ENST00000638068 285 ntBASIC1.06□□□□□ -2.24
KLHL28Q9NXS3 FABP12-201ENST00000360464 551 ntAPPRIS P1 TSL 1 (best) BASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 Y_RNA.295-201ENST00000364918 102 ntBASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 SNORD116-11-201ENST00000383882 92 ntBASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 RNU6-831P-201ENST00000384548 107 ntBASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 SNORD115-47-201ENST00000391226 86 ntBASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 AL356776.1-201ENST00000406574 447 ntBASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 RNA5SP504-201ENST00000410676 117 ntBASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 AC008134.1-201ENST00000420943 193 ntBASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 RPS29P28-201ENST00000446439 141 ntBASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 RNU6-221P-201ENST00000459541 99 ntBASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 RPS29P25-201ENST00000481709 171 ntBASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 RNU1-142P-201ENST00000516682 145 ntBASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 RNU6-1314P-201ENST00000517139 104 ntBASIC1.05□□□□□ -2.24
KLHL28Q9NXS3 POLR3GP2-201ENST00000588366 668 ntBASIC1.05□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 160.1 ms