Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 MIR1244-1-201ENST00000612829 85 ntBASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 MIR1244-3-201ENST00000635744 85 ntBASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 MIR1244-2-201ENST00000636449 85 ntBASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 MIR1244-4-202ENST00000636813 85 ntBASIC2.12□□□□□ -2.07
SMC4Q9NTJ3 RNU4-73P-201ENST00000363164 141 ntBASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 RNU6-280P-201ENST00000364145 104 ntBASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 RNU6-867P-201ENST00000364956 107 ntBASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 RNU6-1297P-201ENST00000384415 104 ntBASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 SNORA75.6-201ENST00000391318 127 ntBASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 MIR190B-201ENST00000401119 79 ntBASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 AC016717.1-201ENST00000448918 286 ntBASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 NDUFB4P10-201ENST00000452541 359 ntBASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 AC022493.2-201ENST00000506122 481 ntBASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 SNORA25.14-201ENST00000516481 132 ntBASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 LINC01919-202ENST00000579506 384 ntTSL 3 BASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 MIR3683-201ENST00000580847 82 ntBASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 MTND5P16-201ENST00000460269 1703 ntBASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC2.11□□□□□ -2.07
SMC4Q9NTJ3 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.1□□□□□ -2.07
SMC4Q9NTJ3 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
SMC4Q9NTJ3 RNU6-727P-201ENST00000363592 107 ntBASIC2.1□□□□□ -2.07
SMC4Q9NTJ3 RNU6-541P-201ENST00000384709 110 ntBASIC2.1□□□□□ -2.07
SMC4Q9NTJ3 AL590399.1-203ENST00000412631 256 ntTSL 5 BASIC2.1□□□□□ -2.07
SMC4Q9NTJ3 AC060773.1-201ENST00000421698 310 ntBASIC2.1□□□□□ -2.07
SMC4Q9NTJ3 MRPS18CP6-201ENST00000423587 223 ntBASIC2.1□□□□□ -2.07
SMC4Q9NTJ3 RPL17P19-201ENST00000489069 552 ntBASIC2.1□□□□□ -2.07
SMC4Q9NTJ3 CBX3P4-201ENST00000538909 354 ntBASIC2.1□□□□□ -2.07
SMC4Q9NTJ3 GNAI2P1-201ENST00000541815 315 ntBASIC2.1□□□□□ -2.07
SMC4Q9NTJ3 AK6P2-201ENST00000549020 471 ntBASIC2.1□□□□□ -2.07
SMC4Q9NTJ3 MIR4255-201ENST00000579351 72 ntBASIC2.1□□□□□ -2.07
SMC4Q9NTJ3 AL117336.2-201ENST00000602435 335 ntBASIC2.1□□□□□ -2.07
SMC4Q9NTJ3 AC069114.2-201ENST00000604699 304 ntBASIC2.1□□□□□ -2.07
SMC4Q9NTJ3 AL078596.1-201ENST00000624856 447 ntBASIC2.1□□□□□ -2.07
SMC4Q9NTJ3 RNU6-112P-201ENST00000363599 104 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 RNY3P11-201ENST00000364153 102 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 RNU6-1305P-201ENST00000364353 104 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 Y_RNA.259-201ENST00000364619 101 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 SNORD87-201ENST00000364849 89 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 Y_RNA.557-201ENST00000384680 107 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 RNY4P36-201ENST00000391116 96 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 MTCYBP4-201ENST00000401524 249 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 AL117342.1-201ENST00000404861 406 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 RN7SKP101-201ENST00000411376 320 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 AC092423.1-201ENST00000430165 186 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 AC099677.2-201ENST00000436385 175 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 Y_RNA.653-201ENST00000459091 95 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 RNU7-87P-201ENST00000459343 62 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 MTND3P22-201ENST00000510932 243 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 AC011406.1-201ENST00000512440 370 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 RNU1-117P-201ENST00000517041 158 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 MIR5094-201ENST00000578766 85 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 MIR5695-201ENST00000579717 85 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 MZT1P2-201ENST00000604387 248 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 AC100812.1-201ENST00000607622 580 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 AC068205.3-201ENST00000636385 468 ntBASIC2.09□□□□□ -2.07
SMC4Q9NTJ3 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.09□□□□□ -2.08
SMC4Q9NTJ3 RNU6-661P-201ENST00000362409 107 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 Y_RNA.140-201ENST00000363474 103 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 RNU5E-4P-201ENST00000364931 120 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 Y_RNA.338-201ENST00000365320 114 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 Y_RNA.384-201ENST00000383909 102 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 RNU6-281P-201ENST00000384212 103 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 AF228730.4-201ENST00000421457 183 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 CST2P1-201ENST00000425770 87 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 ELOCP24-201ENST00000456370 334 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 AC091179.3-201ENST00000474761 144 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 AC010409.1-201ENST00000487382 476 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 AC105758.1-201ENST00000506038 399 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 RNU6-470P-201ENST00000515954 104 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 Y_RNA.706-201ENST00000516933 99 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 AC005899.2-201ENST00000584353 90 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 AC087588.2-201ENST00000617667 426 ntBASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 RBMS2-209ENST00000639027 192 ntTSL 5 BASIC2.08□□□□□ -2.08
SMC4Q9NTJ3 RNU4-79P-201ENST00000362764 141 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 Y_RNA.358-201ENST00000365491 99 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 RNU6-296P-201ENST00000384608 107 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 MIR559-201ENST00000385188 96 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 RNU6-700P-201ENST00000391043 107 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 RNU1-139P-201ENST00000391307 165 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 RPS20P15-201ENST00000412792 311 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 RNU7-57P-201ENST00000459540 60 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 SNORD19B-201ENST00000459623 84 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 SNORA31.17-201ENST00000516953 127 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 AC004584.2-201ENST00000570407 410 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 AC125232.2-201ENST00000592457 143 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 AP000942.3-201ENST00000603702 160 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 AC245060.5-201ENST00000610778 3293 ntBASIC2.07□□□□□ -2.08
SMC4Q9NTJ3 AC006026.1-201ENST00000444025 1803 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 RNU6-862P-201ENST00000362804 105 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 RNU6-1019P-201ENST00000364424 107 ntBASIC2.06□□□□□ -2.08
SMC4Q9NTJ3 RNA5SP363-201ENST00000365072 115 ntBASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 170 ms