Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
TREX1Q9NSU2 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.8□□□□□ -2.28
TREX1Q9NSU2 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC0.8□□□□□ -2.28
TREX1Q9NSU2 AC083904.1-201ENST00000487828 231 ntBASIC0.8□□□□□ -2.28
TREX1Q9NSU2 RNU6-947P-201ENST00000516264 106 ntBASIC0.8□□□□□ -2.28
TREX1Q9NSU2 RNU6-1223P-201ENST00000517124 104 ntBASIC0.8□□□□□ -2.28
TREX1Q9NSU2 MTND1P5-201ENST00000517906 940 ntBASIC0.8□□□□□ -2.28
TREX1Q9NSU2 AC007834.2-201ENST00000536310 343 ntBASIC0.8□□□□□ -2.28
TREX1Q9NSU2 AC006362.1-201ENST00000567392 174 ntBASIC0.8□□□□□ -2.28
TREX1Q9NSU2 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.8□□□□□ -2.28
TREX1Q9NSU2 AP001330.5-201ENST00000607176 411 ntBASIC0.8□□□□□ -2.28
TREX1Q9NSU2 AC006504.8-201ENST00000621046 635 ntBASIC0.8□□□□□ -2.28
TREX1Q9NSU2 ELL2P3-201ENST00000457883 1602 ntBASIC0.79□□□□□ -2.28
TREX1Q9NSU2 RNU6-245P-201ENST00000384020 107 ntBASIC0.79□□□□□ -2.28
TREX1Q9NSU2 RNU6-910P-201ENST00000390844 107 ntBASIC0.79□□□□□ -2.28
TREX1Q9NSU2 Y_RNA.582-201ENST00000391023 95 ntBASIC0.79□□□□□ -2.28
TREX1Q9NSU2 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.79□□□□□ -2.28
TREX1Q9NSU2 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.79□□□□□ -2.28
TREX1Q9NSU2 SNORA31.2-201ENST00000516019 134 ntBASIC0.79□□□□□ -2.28
TREX1Q9NSU2 RNU6-1198P-201ENST00000516904 67 ntBASIC0.79□□□□□ -2.28
TREX1Q9NSU2 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC0.79□□□□□ -2.28
TREX1Q9NSU2 AC011604.1-201ENST00000545978 196 ntBASIC0.79□□□□□ -2.28
TREX1Q9NSU2 MIR5695-201ENST00000579717 85 ntBASIC0.79□□□□□ -2.28
TREX1Q9NSU2 FAM106DP-201ENST00000586416 501 ntBASIC0.79□□□□□ -2.28
TREX1Q9NSU2 AL390123.1-201ENST00000603216 237 ntBASIC0.79□□□□□ -2.28
TREX1Q9NSU2 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.79□□□□□ -2.28
TREX1Q9NSU2 FAM157A-202ENST00000615155 405 ntBASIC0.79□□□□□ -2.28
TREX1Q9NSU2 MIR6788-201ENST00000618842 66 ntBASIC0.79□□□□□ -2.28
TREX1Q9NSU2 AC097520.1-201ENST00000624435 385 ntBASIC0.79□□□□□ -2.28
TREX1Q9NSU2 BCL2L11-225ENST00000640419 249 ntAPPRIS ALT2 TSL 5 BASIC0.79□□□□□ -2.28
TREX1Q9NSU2 SNORD50.1-201ENST00000362987 71 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 Y_RNA.151-201ENST00000363566 112 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 RNU4-76P-201ENST00000364509 141 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 Y_RNA.481-201ENST00000384373 102 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 RNU6-541P-201ENST00000384709 110 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 MIR1185-2-201ENST00000408687 86 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 Z82188.1-201ENST00000436709 154 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC0.78□□□□□ -2.28
TREX1Q9NSU2 RNU7-187P-201ENST00000458985 68 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 AC048334.1-201ENST00000477975 159 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 AC010424.1-201ENST00000506336 297 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 AC091133.4-201ENST00000511142 308 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 SNORA31.4-201ENST00000516049 129 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 RNU7-99P-201ENST00000516271 62 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 RNU6-58P-201ENST00000517143 103 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 AC027419.1-201ENST00000522976 328 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 OSBPL9P5-201ENST00000542581 171 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC0.78□□□□□ -2.28
TREX1Q9NSU2 MIR4778-201ENST00000577635 80 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 AL513534.2-201ENST00000603836 250 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 AL020996.3-201ENST00000606617 222 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 AL133215.3-201ENST00000609801 448 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 AC073349.3-201ENST00000617616 186 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 AP000770.2-201ENST00000623694 100 ntBASIC0.78□□□□□ -2.28
TREX1Q9NSU2 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.78□□□□□ -2.28
TREX1Q9NSU2 U3.8-201ENST00000363675 217 ntBASIC0.77□□□□□ -2.29
TREX1Q9NSU2 SNORD113-7-201ENST00000363762 77 ntBASIC0.77□□□□□ -2.29
TREX1Q9NSU2 RNU6-505P-201ENST00000384427 107 ntBASIC0.77□□□□□ -2.29
TREX1Q9NSU2 RAB28P5-201ENST00000427490 651 ntBASIC0.77□□□□□ -2.29
TREX1Q9NSU2 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC0.77□□□□□ -2.29
TREX1Q9NSU2 PCMTD1P1-201ENST00000455560 355 ntBASIC0.77□□□□□ -2.29
TREX1Q9NSU2 ACA64.5-201ENST00000516207 127 ntBASIC0.77□□□□□ -2.29
TREX1Q9NSU2 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC0.77□□□□□ -2.29
TREX1Q9NSU2 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC0.77□□□□□ -2.29
TREX1Q9NSU2 FRG2DP-202ENST00000566967 323 ntBASIC0.77□□□□□ -2.29
TREX1Q9NSU2 AC004584.2-201ENST00000570407 410 ntBASIC0.77□□□□□ -2.29
TREX1Q9NSU2 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC0.77□□□□□ -2.29
TREX1Q9NSU2 AC022709.1-201ENST00000615967 87 ntBASIC0.77□□□□□ -2.29
TREX1Q9NSU2 U6.73-201ENST00000619194 103 ntBASIC0.77□□□□□ -2.29
TREX1Q9NSU2 AL513423.1-201ENST00000621695 132 ntBASIC0.77□□□□□ -2.29
TREX1Q9NSU2 MIR6863-201ENST00000636112 90 ntBASIC0.77□□□□□ -2.29
TREX1Q9NSU2 AC090582.1-201ENST00000636321 199 ntBASIC0.77□□□□□ -2.29
TREX1Q9NSU2 AP000568.1-201ENST00000282964 442 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 RNU6-1085P-201ENST00000363576 107 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 Y_RNA.167-201ENST00000363735 109 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 RNU4-9P-201ENST00000364951 139 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 Y_RNA.319-201ENST00000365138 92 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 Y_RNA.373-201ENST00000365600 103 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 Y_RNA.415-201ENST00000384012 112 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 AC121342.1-201ENST00000423914 550 ntTSL 3 BASIC0.76□□□□□ -2.29
TREX1Q9NSU2 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.76□□□□□ -2.29
TREX1Q9NSU2 STAG3L5P-204ENST00000443759 179 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 AC105758.1-201ENST00000506038 399 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC0.76□□□□□ -2.29
TREX1Q9NSU2 MTND3P12-201ENST00000559068 328 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC0.76□□□□□ -2.29
TREX1Q9NSU2 MIR4653-201ENST00000585107 83 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 POLR3GP2-201ENST00000588366 668 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 AC022432.1-201ENST00000595739 310 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 AC013244.2-201ENST00000603396 103 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 GHRLOS.1-201ENST00000610995 70 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 AL158209.2-201ENST00000619266 216 ntBASIC0.76□□□□□ -2.29
TREX1Q9NSU2 AL442644.1-201ENST00000454390 3105 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 RNU6-1252P-201ENST00000363054 104 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 RNU6-873P-201ENST00000363833 107 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 RNY1-201ENST00000364228 113 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 Y_RNA.231-201ENST00000364358 102 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 SNORD116-8-201ENST00000384365 95 ntBASIC0.75□□□□□ -2.29
TREX1Q9NSU2 Y_RNA.540-201ENST00000384638 111 ntBASIC0.75□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms