Protein–RNA interactions for Protein: Q9NR23

GDF3, Growth/differentiation factor 3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF3Q9NR23 MIR517C-201ENST00000385103 95 ntBASIC1.56□□□□□ -2.16
GDF3Q9NR23 MIR548B-201ENST00000385247 97 ntBASIC1.56□□□□□ -2.16
GDF3Q9NR23 MIR1304-201ENST00000408243 91 ntBASIC1.56□□□□□ -2.16
GDF3Q9NR23 AC091179.3-201ENST00000474761 144 ntBASIC1.56□□□□□ -2.16
GDF3Q9NR23 RPL7P42-201ENST00000481005 679 ntBASIC1.56□□□□□ -2.16
GDF3Q9NR23 AC023790.1-201ENST00000482174 347 ntBASIC1.56□□□□□ -2.16
GDF3Q9NR23 AC116353.2-201ENST00000505332 712 ntBASIC1.56□□□□□ -2.16
GDF3Q9NR23 Y_RNA.691-201ENST00000516611 103 ntBASIC1.56□□□□□ -2.16
GDF3Q9NR23 Y_RNA.706-201ENST00000516933 99 ntBASIC1.56□□□□□ -2.16
GDF3Q9NR23 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC1.56□□□□□ -2.16
GDF3Q9NR23 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC1.56□□□□□ -2.16
GDF3Q9NR23 AC100812.1-201ENST00000607622 580 ntBASIC1.56□□□□□ -2.16
GDF3Q9NR23 MIR7974-201ENST00000615835 79 ntBASIC1.56□□□□□ -2.16
GDF3Q9NR23 snoZ196.1-201ENST00000625269 89 ntBASIC1.56□□□□□ -2.16
GDF3Q9NR23 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
GDF3Q9NR23 Y_RNA.106-201ENST00000363189 100 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 RNU6-727P-201ENST00000363592 107 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 RNU6-1019P-201ENST00000364424 107 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 SNORD81.2-201ENST00000365153 76 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 Y_RNA.415-201ENST00000384012 112 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 RNU6-281P-201ENST00000384212 103 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 RNU6-793P-201ENST00000384233 104 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 RNU6-331P-201ENST00000384724 107 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
GDF3Q9NR23 RNU4-14P-201ENST00000410858 122 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 AC004965.1-201ENST00000413033 213 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 AC007098.1-201ENST00000420122 367 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 HSPE1P21-201ENST00000438283 308 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC1.55□□□□□ -2.16
GDF3Q9NR23 NDUFB4P10-201ENST00000452541 359 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC1.55□□□□□ -2.16
GDF3Q9NR23 RNU6-221P-201ENST00000459541 99 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC1.55□□□□□ -2.16
GDF3Q9NR23 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 AC105029.1-201ENST00000520250 669 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 AC084364.2-201ENST00000546924 395 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 AC069114.2-201ENST00000604699 304 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 Six3os1_7.1-201ENST00000621512 201 ntBASIC1.55□□□□□ -2.16
GDF3Q9NR23 AC010615.1-201ENST00000594254 1764 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 RNU6-222P-201ENST00000362438 107 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 snoU2-30.2-201ENST00000362805 70 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 RNY1P16-201ENST00000363063 111 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 RNU5F-3P-201ENST00000363767 117 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 Y_RNA.179-201ENST00000363844 90 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 Y_RNA.390-201ENST00000383932 102 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 RNU6-439P-201ENST00000384188 106 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 RNU1-139P-201ENST00000391307 165 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.54□□□□□ -2.16
GDF3Q9NR23 AC138393.2-201ENST00000414742 246 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 AC016909.1-201ENST00000415916 166 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 CST2P1-201ENST00000425770 87 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 HMGN2P34-201ENST00000437647 269 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC1.54□□□□□ -2.16
GDF3Q9NR23 AC093303.1-201ENST00000514549 295 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 RNU6-1114P-201ENST00000516022 107 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 RNU1-92P-201ENST00000517017 135 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 SNORA31.24-201ENST00000517232 57 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 AC025647.1-201ENST00000517879 253 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 AL121579.1-201ENST00000555129 305 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 AC015720.1-201ENST00000565251 277 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 MIR5695-201ENST00000579717 85 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 MZT1P2-201ENST00000604387 248 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 MIR8070-201ENST00000616510 88 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 AC006001.4-201ENST00000622243 395 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 PLD1-217ENST00000627725 174 ntTSL 5 BASIC1.54□□□□□ -2.16
GDF3Q9NR23 AC099654.5-201ENST00000636479 350 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 TPTEP1-208ENST00000636884 213 ntBASIC1.54□□□□□ -2.16
GDF3Q9NR23 U3.8-201ENST00000363675 217 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 Y_RNA.287-201ENST00000364853 94 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 Y_RNA.327-201ENST00000365201 102 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 RNU6-1283P-201ENST00000365314 105 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 MIR520A-201ENST00000384862 85 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 SNORA75.4-201ENST00000391278 119 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 MIR190B-201ENST00000401119 79 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 USP9YP16-201ENST00000430287 407 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 USP9YP23-201ENST00000455085 407 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 MTND5P16-201ENST00000460269 1703 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 MTND4P17-201ENST00000470444 350 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 HMGN1P12-201ENST00000499125 195 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 PRDX4P1-201ENST00000507189 574 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 SNORA20.3-201ENST00000516880 132 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
GDF3Q9NR23 AC096558.1-203ENST00000550516 574 ntTSL 3 BASIC1.53□□□□□ -2.16
GDF3Q9NR23 AC010999.1-201ENST00000611856 324 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 PISRT1.1-201ENST00000616930 107 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 AC099654.14-201ENST00000638599 341 ntBASIC1.53□□□□□ -2.16
GDF3Q9NR23 ZNF209P-201ENST00000593450 2304 ntBASIC1.52□□□□□ -2.17
GDF3Q9NR23 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
GDF3Q9NR23 RNU6-874P-201ENST00000362390 105 ntBASIC1.52□□□□□ -2.17
GDF3Q9NR23 SNORA63D-201ENST00000364359 132 ntBASIC1.52□□□□□ -2.17
GDF3Q9NR23 SNORA25.9-201ENST00000365087 128 ntBASIC1.52□□□□□ -2.17
GDF3Q9NR23 RNU6-417P-201ENST00000384712 107 ntBASIC1.52□□□□□ -2.17
GDF3Q9NR23 MIR499A-201ENST00000384903 122 ntBASIC1.52□□□□□ -2.17
GDF3Q9NR23 RNU6-700P-201ENST00000391043 107 ntBASIC1.52□□□□□ -2.17
GDF3Q9NR23 MIR1185-2-201ENST00000408687 86 ntBASIC1.52□□□□□ -2.17
GDF3Q9NR23 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC1.52□□□□□ -2.17
GDF3Q9NR23 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC1.52□□□□□ -2.17
GDF3Q9NR23 AL353997.1-201ENST00000432936 108 ntBASIC1.52□□□□□ -2.17
GDF3Q9NR23 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.52□□□□□ -2.17
GDF3Q9NR23 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 123.8 ms